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Chemistry Faculty Publications

2023

Single-cell RNA sequencing

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Full-Text Articles in Medicine and Health Sciences

Peripheral Blood Mononuclear Cell Mitochondrial Dysfunction In Acute Alcohol-Associated Hepatitis, Annette Bellar, Nicole Welch, Jaividhya Dasarathy, Amy Attaway, Ryan Musich, Avinash Kumar, Jinendiran Sekar, Saurabh Mishra, Yana I. Sandlers, Et. Al May 2023

Peripheral Blood Mononuclear Cell Mitochondrial Dysfunction In Acute Alcohol-Associated Hepatitis, Annette Bellar, Nicole Welch, Jaividhya Dasarathy, Amy Attaway, Ryan Musich, Avinash Kumar, Jinendiran Sekar, Saurabh Mishra, Yana I. Sandlers, Et. Al

Chemistry Faculty Publications

Background: Patients with acute alcohol-associated hepatitis (AH) have immune dysfunction. Mitochondrial function is critical for immune cell responses and regulates senescence. Clinical translational studies using complementary bioinformatics-experimental validation of mitochondrial responses were performed in peripheral blood mononuclear cells (PBMC) from patients with AH, healthy controls (HC), and heavy drinkers without evidence of liver disease (HD).
Methods: Feature extraction for differentially expressed genes (DEG) in mitochondrial components and telomere regulatory pathways from single-cell RNAseq (scRNAseq) and integrated 'pseudobulk' transcriptomics from PBMC from AH and HC (n = 4 each) were performed. After optimising isolation and processing protocols for functional studies in …