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2015

Caenorhabditis elegans

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Full-Text Articles in Medicine and Health Sciences

Nhl-2 Modulates Microrna Activity In Caenorhabditis Elegans, Christopher Hammell, Isabella Lubin, Peter Boag, T. Keith Blackwell, Victor Ambros Oct 2015

Nhl-2 Modulates Microrna Activity In Caenorhabditis Elegans, Christopher Hammell, Isabella Lubin, Peter Boag, T. Keith Blackwell, Victor Ambros

Victor R. Ambros

TRIM-NHL proteins represent a large class of metazoan proteins implicated in development and disease. We demonstrate that a C. elegans TRIM-NHL protein, NHL-2, functions as a cofactor for the microRNA-induced silencing complex (miRISC) and thereby enhances the posttranscriptional repression of several genetically verified microRNA targets, including hbl-1 and let-60/Ras (by the let-7 family of microRNAs) and cog-1 (by the lsy-6 microRNA). NHL-2 is localized to cytoplasmic P-bodies and physically associates with the P-body protein CGH-1 and the core miRISC components ALG-1/2 and AIN-1. nhl-2 and cgh-1 mutations compromise the repression of microRNA targets in vivo but do not affect microRNA …


Molecular Basis Of Rna Recognition By The Embryonic Polarity Determinant Mex-5, John Pagano, Brian Farley, Lisa Mccoig, Sean Ryder May 2015

Molecular Basis Of Rna Recognition By The Embryonic Polarity Determinant Mex-5, John Pagano, Brian Farley, Lisa Mccoig, Sean Ryder

Sean P. Ryder

Embryonic development requires maternal proteins and RNA. In Caenorhabditis elegans, a gradient of CCCH tandem zinc finger (TZF) proteins coordinates axis polarization and germline differentiation. These proteins govern expression from maternal mRNAs by an unknown mechanism. Here we show that the TZF protein MEX-5, a primary anterior determinant, is an RNA-binding protein that recognizes linear RNA sequences with high affinity but low specificity. The minimal binding site is a tract of six or more uridines within a 9-13-nucleotide window. This sequence is remarkably abundant in the 3'-untranslated region of C. elegans transcripts, demonstrating that MEX-5 alone cannot specify mRNA target …


Rna Target Specificity Of The Embryonic Cell Fate Determinant Pos-1, Brian Farley, John Pagano, Sean Ryder May 2015

Rna Target Specificity Of The Embryonic Cell Fate Determinant Pos-1, Brian Farley, John Pagano, Sean Ryder

Sean P. Ryder

Specification of Caenorhabditis elegans body axes and cell fates occurs prior to the activation of zygotic transcription. Several CCCH-type tandem zinc finger (TZF) proteins coordinate local activation of quiescent maternal mRNAs after fertilization, leading to asymmetric expression of factors required for patterning. The primary determinant of posterior fate is the TZF protein POS-1. Mutants of pos-1 are maternal effect lethal with a terminal phenotype that includes excess pharyngeal tissue and no endoderm or germline. Here, we delineate the consensus POS-1 recognition element (PRE) required for specific recognition of its target mRNAs. The PRE is necessary but not sufficient to pattern …