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Full-Text Articles in Biology

A High-Fat Diet Alters Genome-Wide Dna Methylation And Gene Expression In Sm/J Mice, Madeline R. Keleher, Rabab Zaidi, Lauren Hicks, Shyam Shah, Xiaoyun Xing, Daofeng Li, Ting Wang, James M. Cheverud Dec 2018

A High-Fat Diet Alters Genome-Wide Dna Methylation And Gene Expression In Sm/J Mice, Madeline R. Keleher, Rabab Zaidi, Lauren Hicks, Shyam Shah, Xiaoyun Xing, Daofeng Li, Ting Wang, James M. Cheverud

Biology: Faculty Publications and Other Works

Background: While the genetics of obesity has been well defined, the epigenetics of obesity is poorly understood. Here, we used a genome-wide approach to identify genes with differences in both DNA methylation and expression associated with a high-fat diet in mice. Results: We weaned genetically identical Small (SM/J) mice onto a high-fat or low-fat diet and measured their weights weekly, tested their glucose and insulin tolerance, assessed serum biomarkers, and weighed their organs at necropsy. We measured liver gene expression with RNA-seq (using 21 total libraries, each pooled with 2 mice of the same sex and diet) and DNA methylation …


The Effect Of Dietary Fat On Behavior In Mice, Madeline R. Keleher, Rabab Zaidi, Kayna Patel, Amer Ahmed, Carlee Bettler, Cassondra Pavlatos, Shyam Shah, James M. Cheverud Dec 2018

The Effect Of Dietary Fat On Behavior In Mice, Madeline R. Keleher, Rabab Zaidi, Kayna Patel, Amer Ahmed, Carlee Bettler, Cassondra Pavlatos, Shyam Shah, James M. Cheverud

Biology: Faculty Publications and Other Works

Purpose Obesity is linked to cognitive dysfunction in humans and rodents, and its effects can be passed on to the next generation. However, the extent of these effects is not well understood. The purpose of this study was to determine the effect of a prenatal maternal high-fat diet and an individual high-fat diet in inbred mice. Methods We varied maternal diet and offspring diet to test the hypothesis that a high-fat diet would increase anxiety, reduce activity levels, and impair nest-building. First, we fed a high-fat (HF) or low-fat (LF) diet to genetically identical female Small (SM/J) mice and mated …


Integrating Complementary Methods To Improve Diet Analysis In Fishery-Targeted Species, Jordan K. Matley, Gregory E. Maes, Floriaan Devloo-Delva, Roger Huerlimann, Gladys Chua, Andrew J. Tobin, Aaron T. Fisk, Colin A. Simpfendorfer, Michelle R. Heupel Sep 2018

Integrating Complementary Methods To Improve Diet Analysis In Fishery-Targeted Species, Jordan K. Matley, Gregory E. Maes, Floriaan Devloo-Delva, Roger Huerlimann, Gladys Chua, Andrew J. Tobin, Aaron T. Fisk, Colin A. Simpfendorfer, Michelle R. Heupel

Great Lakes Institute for Environmental Research Publications

Developing efficient, reliable, cost-effective ways to identify diet is required to understand trophic ecology in complex ecosystems and improve food web models. A combination of techniques, each varying in their ability to provide robust, spatially and temporally explicit information can be applied to clarify diet data for ecological research. This study applied an integrative analysis of a fishery-targeted species group—Plectropomus spp. in the central Great Barrier Reef, Australia, by comparing three diet-identification approaches. Visual stomach content analysis provided poor identification with ~14% of stomachs sampled resulting in identification to family or lower. A molecular approach was successful with prey from …


Diet Composition Explains Reductions In Stream Salamander Occupancy And Abundance Along A Conductivity Gradient, Jacob Matthew Hutton Jan 2018

Diet Composition Explains Reductions In Stream Salamander Occupancy And Abundance Along A Conductivity Gradient, Jacob Matthew Hutton

Theses and Dissertations--Forestry and Natural Resources

Changes in land use such as mountaintop removal mining with valley fills (MTR/VF) affect chemical, physical, and hydrological properties of headwater streams. Although numerous stream taxa have experienced significant declines from MTR/VF, stream salamanders appear to be particularly sensitive. Yet, the specific mechanism(s) responsible for the population declines has eluded researchers. We sampled salamander assemblages across a continuous specific conductivity (SC) gradient in southeastern Kentucky and estimated occupancy rates and abundance estimates along this gradient. We also examined the diet of larval and adult salamanders to determine if autochthony (A/T prey), total prey volume, and body condition is influenced by …


Total Antioxidant Levels Of Individual Foods Versus Combinations Of Food And The Effect On Apoptotic Induction In Hela Cells, Natalie Van Ochten Jan 2018

Total Antioxidant Levels Of Individual Foods Versus Combinations Of Food And The Effect On Apoptotic Induction In Hela Cells, Natalie Van Ochten

Undergraduate Honors Thesis Collection

Cancer affects over 14.5 million U.S. citizens of all ages, socioeconomic statuses, and races. Some countries have much lower cancer incident rates than the U.S. One major contributing factor to the lower incident rates is diet. Diets in countries with low rates of cancer include antioxidant-rich foods like raw fruits, raw vegetables, and spices. Studies have shown that antioxidants in black tea and berries induce apoptosis in cancerous cells. Because studies have shown that diet and cancer rates are related, it is important to analyze what we eat and how it impacts us. In this study, I quantified antioxidant levels …