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Full-Text Articles in Life Sciences

Exploring The Consistency Of Flow Regimes Within And Among Ecoregions Of The Southeastern United States, Frank Paul Braun Iv Jan 2024

Exploring The Consistency Of Flow Regimes Within And Among Ecoregions Of The Southeastern United States, Frank Paul Braun Iv

Electronic Theses and Dissertations

Human manipulation of river systems has long been a known contributor to the loss of freshwater biodiversity. By accounting for environmental causes of hydrologic variation among rivers, we can better understand how ecoregion mediates flow regimes and forecast species that may be at risk. Presumably, natural variation associated with ecoregion boundaries exerts strong influence on flow regimes, and may mediate relationships between other features (e.g., land use, dam operations) and hydrology. However, such between-ecoregion variation is poorly investigated, particularly at fine spatial and temporal scales. I characterized 10 hydrologic metrics, representing the five key dimensions of the flow regime (magnitude, …


Loggerhead Shrike Detectability And Occurrence In Coastal South Carolina Urban Areas, Michelle Krauser May 2022

Loggerhead Shrike Detectability And Occurrence In Coastal South Carolina Urban Areas, Michelle Krauser

Electronic Theses and Dissertations

Grassland birds, such as the loggerhead shrike (Lanius ludovicianus), are threatened by extensive land-use change, including urbanization. Loggerhead shrikes have been declining since the early 1900s and are rare or extirpated in portions of their former range. Obtaining reliable population estimates of loggerhead shrikes is important to identify demographic trends and ensure conservation decisions are based on an accurate assessment of their current status. Imperfect detection, or the inability to detect every shrike during a survey, can result in biased population estimates. Estimating detection probability is labor-intensive and requires assumptions that are difficult to satisfy in most field studies. Understanding …


Vignette 06: Living Shorelines In Puget Sound, Jason Toft May 2021

Vignette 06: Living Shorelines In Puget Sound, Jason Toft

Institute Publications

Nearly one third of Puget Sound’s shorelines are armored (e.g., seawall, bulkhead, riprap). Armoring has documented negative impacts on the flora and fauna that benefit from healthy intertidal beaches. Although shoreline armor may be necessary in some cases to protect people and property, there are often promising “living shoreline” options to restore natural features, also referred to as soft or green shorelines. These options can be applied to situations where complete restoration is either impractical or not feasible given human constraints. Living shoreline techniques often include a mix of design options, including armor removal, sediment nourishment of beaches, log placement, …


Vignette 07: Stormwater Effluent Exerts A Key Pressure On The Salish Sea, Emily Howe May 2021

Vignette 07: Stormwater Effluent Exerts A Key Pressure On The Salish Sea, Emily Howe

Institute Publications

One of the primary terrestrial pressures on the Salish Sea estuarine and marine environment is urban stormwater runoff. When rainfall runs across hard, impervious surfaces, rather than soaking into the soil, it picks up and delivers toxic contaminants directly to nearby streams, rivers, and eventually the Salish Sea. In fact, for most toxic substances, surface runoff is the largest contributing source of loading to Puget Sound. Unfortunately, the Salish Sea’s relationship with stormwater effluent is no outlier; stormwater is the fastest growing cause of surface water impairment in the United States as urbanization transitions forested and other natural landscapes to …


State Of The Salish Sea: Executive Summary, Kathryn L. Sobocinski May 2021

State Of The Salish Sea: Executive Summary, Kathryn L. Sobocinski

Institute Publications

This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …


Vignette 11: Ecological Consequences Of Built Shorelines In The Salish Sea, Stuart H. Munsch May 2021

Vignette 11: Ecological Consequences Of Built Shorelines In The Salish Sea, Stuart H. Munsch

Institute Publications

The world's population is disproportionately located near water. As a result, many nearshore ecosystems are highly modified. This is the case in the Salish Sea where many species rely on shoreline habitats. One of the major modifications to the Salish Sea's shoreline is armoring. Armored shorelines sever the connection between land and sea, preventing mutual exchange of nutrients and energy, influencing fish composition, and affecting photosynthetic species through overwater structures. By appreciating habitat impacts and how to mitigate them, we may steer toward a future that enables people and nearshore ecosystems to coexist. Restoring shorelines by removing armoring can recover …


Vignette 20: Fraser River Estuary In Need Of Urgent Intensive Care, Laura Kehoe, Tara G. Martin May 2021

Vignette 20: Fraser River Estuary In Need Of Urgent Intensive Care, Laura Kehoe, Tara G. Martin

Institute Publications

The Fraser River is the lifeline of the Salish Sea, influencing its stratification, circulation, and primary productivity. If we do not take strong action to conserve the Fraser River estuary, two-thirds of the species at risk in this region are predicted to have a less than 50% chance of survival. Many of the region's most iconic species could disappear. Conservation action combined with environmental governance is a pathway for a brighter future for the Fraser River and other highly contested regions.


Section 1: Introduction, Kathryn L. Sobocinski May 2021

Section 1: Introduction, Kathryn L. Sobocinski

Institute Publications

Section 1 is an introduction to the report and the Salish Sea as a whole. The introduction provides an overview of the Salish Sea, the concept of "ecosystem health," and a roadmap to the rest of the report.


Section 3: Urbanization And Human Impacts To The Seascape, Kathryn L. Sobocinski May 2021

Section 3: Urbanization And Human Impacts To The Seascape, Kathryn L. Sobocinski

Institute Publications

Section 3 turns to an in-depth discussion of stressors and impacts to the ecosystem from population growth and urbanization, such as increases in impervious surfaces, hardening of shorelines, and the problems caused by a myriad of marine contaminants.


Section 2: Context, Kathryn L. Sobocinski May 2021

Section 2: Context, Kathryn L. Sobocinski

Institute Publications

Section 2 sets a foundation for understanding the Salish Sea ecosystem by describing its fundamental biophysical processes and structure, including estuarine circulation, ecological productivity, and an overview of several important biogenic habitats.


Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes May 2021

Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes

Institute Publications

Section 5 introduces cumulative effects and brings in brief case discussions focused on herring, salmon, and orcas. Understanding the layers of stressors the ecosystem faces is integral to gaining a full picture of declines in ecosystem function.


Vignette 08: Connection To Place: Indigenous Leadership In Səlilwət (Burrard Inlet), Tsleil-Waututh Nation’S Treaty Lands And Resources Department May 2021

Vignette 08: Connection To Place: Indigenous Leadership In Səlilwət (Burrard Inlet), Tsleil-Waututh Nation’S Treaty Lands And Resources Department

Institute Publications

Since time out of mind, Tsleil-Waututh have used and occupied Burrard Inlet and surrounding watersheds. Generations of Tsleil-Waututh people were brought up with the teaching, “When the tide went out, the table was set.” About 90% of our diet was once derived from Burrard Inlet and the Fraser River, but today the Inlet is unable to support our needs. Cumulative effects of colonial settlement and development have eroded the ecological health, integrity, and diversity of the Inlet. Tsleil-Waututh Nation (TWN) has a goal to restore the health of the Inlet so that we, and future generations of Tsleil-Waututh People, can …


Section 6: Opportunities For Improving Assessment And Understanding Of The Salish Sea, Kathryn L. Sobocinski May 2021

Section 6: Opportunities For Improving Assessment And Understanding Of The Salish Sea, Kathryn L. Sobocinski

Institute Publications

Section 6 offers a list of science-based needs and opportunities brought to light by the report and various existing efforts within the Salish Sea science community, representing opportunities for greater collaboration across geographic and jurisdictional boundaries.


Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski May 2021

Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski

Institute Publications

Section 4 shifts from the local impacts of urbanization to the locally realized impacts of global climate change, including ocean acidification and sea level rise, followed by evidence of climate change in the ecosystem, ranging from phytoplankton and kelp, to wetlands, salmon, and marine birds.


The State Of The Salish Sea, Kathryn L. Sobocinski May 2021

The State Of The Salish Sea, Kathryn L. Sobocinski

Institute Publications

This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …


Genetic And Ecological Consequences Of Recent Habitat Fragmentation In A Narrow Endemic Plant Species Within An Urban Context, Nicola Delnevo, Andrea Piotti, Michele Carbognani, Eddie J. Van Etten, William D. Stock, David L. Field, Margaret Byrne Jan 2021

Genetic And Ecological Consequences Of Recent Habitat Fragmentation In A Narrow Endemic Plant Species Within An Urban Context, Nicola Delnevo, Andrea Piotti, Michele Carbognani, Eddie J. Van Etten, William D. Stock, David L. Field, Margaret Byrne

Research outputs 2014 to 2021

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout …


Variation In Reversal Learning By Three Generalist Mesocarnivores, Lauren A. Stanton, Eli S. Bridge, Joost Huizinga, Shylo R. Johnson, Julie K. Young, Sarah Benson‑Amram Jan 2021

Variation In Reversal Learning By Three Generalist Mesocarnivores, Lauren A. Stanton, Eli S. Bridge, Joost Huizinga, Shylo R. Johnson, Julie K. Young, Sarah Benson‑Amram

USDA Wildlife Services: Staff Publications

Urbanization imposes novel challenges for wildlife, but also provides new opportunities for exploitation. Generalist species are commonly found in urban habitats, but the cognitive mechanisms facilitating their successful behavioral adaptations and exploitations are largely under-investigated. Cognitive flexibility is thought to enable generalists to be more plastic in their behavior, thereby increasing their adaptability to a variety of environments, including urban habitats. Yet direct measures of cognitive flexibility across urban wildlife are lacking. We used a classic reversal-learning paradigm to investigate the cognitive flexibility of three generalist mesocarnivores commonly found in urban habitats: striped skunks (Mephitis mephitis), raccoons ( …


Improving Understanding Of Forest Communities And Biodiversity With Multi-Dimensional Landscape Gradients, Ben J. Padilla Dec 2020

Improving Understanding Of Forest Communities And Biodiversity With Multi-Dimensional Landscape Gradients, Ben J. Padilla

Doctoral Dissertations

This dissertation was motivated by a desire to understand the effects of habitat degradation and urbanization on a single species in a single study system in western Massachusetts, the red-backed salamander (Plethodon cinereus), but along the way unexpected conceptual and methodological hurdles caused the work to grow into a multi-species, multi-region, and multi-scale endeavor. As I designed my dissertation research and began considering approaches to quantifying heterogeneity and human influence in my study landscape, I recognized inconsistencies in methods used to define and quantify landscape metrics, particularly in urban systems. To investigate further, I conducted a critical review …


Long-Term Trends Of Stream Fish Community Assemblages In Southern Missouri With Contemporary Land Use Impacts, Stephanie Marie Sickler Aug 2018

Long-Term Trends Of Stream Fish Community Assemblages In Southern Missouri With Contemporary Land Use Impacts, Stephanie Marie Sickler

MSU Graduate Theses

Stream fish communities in the Ozarks are structured via a number of different mechanisms, including basin, stream size, and human land use. The purpose of this study was to understand the structuring mechanisms of stream fish communities in southern Missouri. I compiled 48 years of historical fish collections performed by the Ichthyology class at Missouri State University consisting of 140 sites. I resampled 45 of these sites in summer of 2016. First, I tested whether communities are different between basins and stream size. Next, I tested associations of land use at three spatial scales to local fish communities. Last, I …


Wildlife Use Of Vernal Pools In An Urbanizing Landscape With A Focus On Population Vitality Of Vernal Pool-Breeding Amphibians, Carly Jasmine Eakin Phd May 2018

Wildlife Use Of Vernal Pools In An Urbanizing Landscape With A Focus On Population Vitality Of Vernal Pool-Breeding Amphibians, Carly Jasmine Eakin Phd

Electronic Theses and Dissertations

Vernal pools in the northeastern United States provide essential habitat for pool-breeding amphibians and provide resources for other forest-dwelling wildlife. These pools and pool-breeding amphibians in particular are threatened by land conversion associated with urbanization and urban-associated factors. The responses of these amphibians and of birds and mammals using vernal pools to intermediate levels of urban development are largely unknown. I used field observations and lab experiments to study the amphibians, birds, and mammals associated with vernal pools along an urban development gradient in greater Bangor, Maine.

In Chapter 1, I examined bird and mammal use and assemblage composition at …


Urban-Related Distribution Patterns Of An Iconic Salish Sea Mesopredator, The Giant Pacific Octopus (Enteroctopus Dofleini), Eliza C. Heery, Amy G. Olsen, Blake E. (Blake Edward) Feist, Kenneth P. Sebens Apr 2018

Urban-Related Distribution Patterns Of An Iconic Salish Sea Mesopredator, The Giant Pacific Octopus (Enteroctopus Dofleini), Eliza C. Heery, Amy G. Olsen, Blake E. (Blake Edward) Feist, Kenneth P. Sebens

Salish Sea Ecosystem Conference

Like many coastal areas globally, the Salish Sea has undergone rapid urbanization over recent decades. Terrestrial research suggests urbanization facilitates a variety of mesopredators by enhancing food and shelter resources and by limiting apex predation. Yet urbanization’s effect on mesopredators in the marine environment has rarely been examined. The giant Pacific octopus, Enteroctopus dofleini, is an iconic mesopredator of the Pacific Northwest due to its size and cognition, and is thought to reach a particularly large maximum size in inland waters of the Salish Sea. We examined the spatial distribution patterns and habitat use of giant Pacific octopus in Puget …


The Effects Of Urbanization On Nitrogen Processing In Urban Streams, Peter Francissen, Dr. Kevin Geedey, Dr. Michael Reisner May 2017

The Effects Of Urbanization On Nitrogen Processing In Urban Streams, Peter Francissen, Dr. Kevin Geedey, Dr. Michael Reisner

Celebration of Learning

Urban stream syndrome is described as the deterioration of stream health in an urbanized watershed and is associated with the loss of ecosystem services, which in turn degrades downstream environments. One key symptom of the urban stream syndrome is reduced processing of inorganic nitrogen. Previous research suggests that as urbanization increases and water quality decreases, the uptake length (Sw) of inorganic N increases. This indicates that the stream is increasing the export of N downstream compared to in situ incorporation of N into the ecosystem. We measured uptake length (Sw) of NO3, using a pulse addition method, along 9 different …


Urbanization—The Bad, The Good, And The Very Good, Rebecca Dolan Feb 2016

Urbanization—The Bad, The Good, And The Very Good, Rebecca Dolan

Rebecca W. Dolan

Great strides have been made in studying effects of urbanization on plant life in recent years. However, much remains to be learned about how the urban environment acts as a filter on flora. There is some evidence that environments in cities are so similar that they all select for the same plants or plants with the same suite of characteristics, resulting in biotic homogenization, but the jury is still out. We do know that some cities harbor a thriving and diverse native flora. Dolan will talk about what cities can do to increase the chances for long-term survival of native …


The Environmental Condition Of Tan Brook And Campus Pond, A Community And University Concern, Marita Clay, Robert F. Smith Jan 2014

The Environmental Condition Of Tan Brook And Campus Pond, A Community And University Concern, Marita Clay, Robert F. Smith

Research

Small streams have the unfortunate ability to be greatly impacted by human intervention. Civilizations for centuries have attempted to alter the natural state of their environment, and Amherst's own Tan Brook is a local example of the consequences of human alterations on a stream. The brook flows over and under what many local citizens call home, and where many UMass students go to learn. A healthier Tan Brook would be expected to provide for improvement of ecosystem services such as flood control and nutrient processing, resulting in a cleaner campus pond and a better connection between the stream and the …


Qualitative And Comparative Analysis Of Stormwater Management In The Tan Brook Watershed, Natalia Von Hausen, Robert F. Smith Jan 2014

Qualitative And Comparative Analysis Of Stormwater Management In The Tan Brook Watershed, Natalia Von Hausen, Robert F. Smith

Research

The Tan Brook Watershed is both a daylighted and diverted underground stream that runs through the Town Center of Amherst and the campus of UMass Amherst. Various stormwater management practices have been used to infiltrate stormwater runoff from streets, lots, buildings and/or vehicles. These systems are custom-designed relative to the surrounding permeability of the soil, vegetation and geographical topography. Some systems have higher success rates than others.