Life Sciences Commons^™

The Importance Of Planning: Science Education From Many Points Of View, Kirsten Morgan Edwards

Senior Theses

The purpose of this thesis project was to bridge the divide between public lands, such as parks, and the education system; national parks and monuments are great resources for education. In addition to promoting outside of the classroom education, this project explores different teaching methods and how changing pedagogical practice can help more students learn in the long term. In order to explore different methods of teaching, I created three different lesson plans that could be used, for example, in places like Congaree National Park, to bring education outside of the traditional school environment. These lesson plans are supplemental materials …

The Chemistry Of Matching Italian Foods With Wines, Samuel Collinsworth, Rachael Maynard

Senior Theses

This report attempts to explain the science behind matching Italian food with wines. Common knowledge states that certain wines make better pairings with certain food dishes, but the general public knows little about why these foods and wines make better matches. This paper aims to use examples of tastings of Italian foods with different wines in order to educate its readers on the science behind the pairings. Before these tastings are analyzed, background information is provided about the science of taste. A description of the five basic tastes is given, separating them into appetitive and aversive tastes, and the chemistry …

Epigenetic Regulation Of Salicylic Acid-Mediated Plant Defense, Phillip Key

Senior Theses

Plant pathogens remain a significant threat to the stability of modern agricultural systems, and the investigation of mechanisms to improve the security of food resources has led to the partial characterization of plant immune response. With this progress, there is a newfound ability to analyze the relative pathogen resistance capability of specifically modified organisms, and in doing so, it is possible to identify individual alterations that might play a role in creating a more robust immune response. In this study, ten Arabidopsis thaliana mutants were infiltrated with Pseudomonas syringae pv. morsprunorum alongside positive and negative control Col-0 Wild-Type and npr1-2. …

Friends, Enemies, Or Hitchhikers? Exploring The Relationship Between Fungus, Butterfly, And Rest Plant At Fort Jackson, South Carolina, Miranda F. Hannah

Senior Theses

This study was undertaken to investigate the relationships between butterflies as pollinators, host plants, and fungi. Euptoieta claudia (Lepidoptera: Nymphalidae) butterflies were captured on flowers at McCrady Training Center, Fort Jackson, South Carolina and the fungi isolated from the legs and abdomens of these butterflies was identified and analyzed. Butterflies were found to carry a variety of fungal species including Penicillium, Cladosporium, Curvularia, Fusarium, and Aspergillus. Butterflies carrying the highest quantity of different species of fungi were captured on Passiflora incarnata flowers, and the number of fungal species per butterfly seems to be due to chance. The most common species …

Assessing Variation In Visual Abilities In Daphnia As A Result Of Disparity In Eye Sizes, Adrian Perez

Senior Theses

The functionality of an eye is affected by a number of structural factors, and altering any of these factors often involves inevitable tradeoffs between resolution and sensitivity. However, it has been theoretically reasoned, and tested empirically, that increasing the size of an eye allows for both of these central features of vision to be improved due to corresponding increases in lens size. This study examines the relevance of this hypothesis for the vision of Daphnia in both interspecific and intraspecific contexts. The visual capabilities of six different species of Daphnia are tested using the optomotor response—a visually mediated behavior that …

Potential For Aquaculture Integration With Wastewater Treatment Wetlands In Southern Iraq, Melaina Dyck

Senior Theses

Wetlands provide key ecosystem services that sustain human communities. The Mesopotamiam Marshes of southern Iraq continuously supported civilization there for 6000 years. A combination of upstream damming and intentional draining by the Iraqi government led the entire ecosystem to collapse, devastating local human communities. One of the most significant ecosystem services lost was water remediation, filtration and storage. Following the collapse of the marshes, water quality in southern Iraq declined to the point of being deleterious to human health and barely useful for farming or fish production. Wastewater treatment wetlands are a potential solution for restoring wetlands and remediating polluted …

An Illustrated Investigation Of Agraulis Vanillae And Its Larval Food Plants, Christiana M. Keinath

Senior Theses

To create my work, I directly observed caterpillars, chrysalises, and adult butterflies. I used a variety of media to depict salient aspects of gulf fritillary anatomy and to follow the species through its life stages in connection with its passionflower hosts. I focused on accurately recreating what I observed, as well as breaking down the organisms into their component colors, lines, shapes, and values. In my work I emphasized natural textures, which vary greatly as the caterpillars undergo their morphological changes. As a result of this project, I improved my observation and life drawing skills and learned how the process …

A Comparison Of Imputation Algorithms For Modeling Water Quality, Carter Alexander Allen

Senior Theses

This project addresses the need for predictive modeling tools to forecast expected concentrations of fecal bacteria in recreational waters in the Charleston, SC area. Data was provided by Charleston Waterkeeper, a water quality monitoring organization that has been measuring Enterococcus faecalis concentrations at 15 recreational sites since 2013. The data contain a non-negligible number of censored and missing observations, so three distinct imputation methods were developed and compared in terms of their effect on final predictive model characteristics. The best performing method relied on drawing samples from a truncated normal distribution to replace censored values, and using a partial model …

Scaling Of Anatomically Derived Maximal Bite Force In Primates, Ashley Deutsch

Senior Theses

Bite force analysis is important the examination of the evolutionary factors that have shaped the masticatory apparatus. Unfortunately, in primates, empirically measured bite force is largely unavailable because of the invasive nature of the procedure. Because of this, we have estimated bite force in a large sample across the primate order at three different realistic bite points along the tooth row: the first maxillary incisor, the maxillary canine, and the paracone of the first maxillary molar. Here, we model bite force by combining measured physiological crosssectional area of the jaw adductors from Hartstone-Rose and colleagues (2017) with osteological measurements from …

Hallmark Features Of Stem Anatomy In The Family Lamiaceae, Catherine Garner

Senior Theses

Lamiaceae is a cosmopolitan family, containing around 236 genera and 7,534 species. The family has been the object of considerable taxonomic controversy and ultimate revision, especially concerning subfamilial and tribal limits. A broad-based anatomical approach has been undertaken to assess comparative anatomy of the stem as a reasonable systematic technique. The stems of several members of the family were compared. Cross-sections were made using the recently invented hydromicrotome, fixed, and examined at magnifications of 40x, 100x, and 400x. The common anatomical features of each sectioned species were determined, and used to establish a basic guide to the hallmark stem features …

Tree Damage From Hurricane Matthew Affecting Forest Dynamics In Congaree National Forest, Connor Lentz

Senior Theses

The Congaree National Forest serves as an ecological model for bottomland-hardwood forests. Hurricanes periodically strike the Southeast United States, with high-wind speeds causing damage affecting the Congaree National Forest and modifying forest dynamics. This has been well-studied from the effects of Hurricane Hugo in September 1989 (Sharitz et al. 1993). In October 2016, Hurricane Matthew, a category 5 storm, made landfall in the Southeastern United States, and eventually moved through the Congaree National Forest. The high winds and precipitation caused widespread tree damage throughout Congaree. This study used a belt-transect survey of 14.7km of trails throughout the park to record …

The Effects Of Low-Dose Ionizing Radiation On Voles From The Chernobyl Exclusion Zone, Justin Sindoni

Senior Theses

Much is known about the effects of high doses of ionizing radiation exposure, but little is known about the effects of low doses of ionizing radiation over extended periods of time. Nuclear power plant disasters, in particular the 1986 Chernobyl disaster, have led to long-term radioactive contamination of their surrounding areas, and more research is needed to learn about the effects of the contamination. In order to better understand the impacts of low-dose ionizing radiation on animal populations, bank voles (Myodes glareolus) from the Chernobyl exclusion zone were studied. Voles were captured from 64 sites throughout the exclusion zone, and …

The Energetic Consequences Of Temperature Variation And Sequential Autotomization For The Stone Crab, Menippe Spp., Eric R. Hancock

Theses and Dissertations

The stone crab, Menippe spp., is harvested in a claw only fishery along the Gulf and southeastern Atlantic coasts of the United States. As climate change continues to warm these areas, crabs are forced to cope with higher water temperatures and lower dissolved O2 concentrations. These altered environmental conditions may influence crab energetics by altering both energy intake and expenditure. To inform fishery sustainability as well as prepare for a potential range expansion of the crab, this study investigates the energetic intake and expenditure of individual stone crabs. Crabs were found to respire 80 and 69% more following the loss …

Assessing Women's Attitudes Towards Genetic Testing For Hereditary Breast Cancer, Taylor Jane Apostolico

Theses and Dissertations

OBJECTIVES: Hereditary Breast and Ovarian Cancer (HBOC) is an autosomal dominant cancer predisposition syndrome with a 46-87% lifetime risk of breast cancer. Unaffected women who have HBOC are eligible for more screening procedures and prophylactic surgeries that may reduce the risk of developing cancer by up to 95%. The objectives of this study were to assess women’s awareness of and interest in breast cancer genetic testing services, as well as women’s attitudes and beliefs regarding the clinical utilization of HBOC genetic testing across demographic categories. METHODS: Two-hundred and sixty-eight women completed a 35-item survey designed to capture perceptions of HBOC …

Causes And Consequences Of Individual Phenotypic Differences In Brachyuran Crabs With A Focus On Behavior, Benjamin A. Belgrad

Theses and Dissertations

Individual variation defines almost every morphological, physiological, and behavioral aspect of populations and is a fundamental component of many ecosystem processes. Recent work indicates that accounting for these individual differences can enhance our ability to predict community responses to environmental disturbances which is becoming increasingly important in an era of extraordinary global change. However, our understanding of how different individual characteristics are connected to each other and governed by the environment remains limited.

This study sought to evaluate the relationship between individual behavior, physiological condition, and local habitat for Brachyuran crabs as well as the subsequent strength of their predator-prey …

Climate Change As A Contributor To Terrorism: A Case Study In Nigeria And Pakistan, Natalie Lytle

Senior Theses

This thesis explores the relationship between climate change and terrorism. It seeks to identify climate change as a contributing factor to terrorism. The motivation for this research is the increasing threat from both global issues. The threat of climate change and terrorism were heavily debated topics in the United States 2016 election, and remain contentious topics for world leaders today. The years 2014 and 2015 were the top two deadliest years for global terrorism, and out of the 17 hottest years on record, 16 of them have occurred since 2000. The world has already begun to see the repercussions of …

Mismatch Tolerance During Homologous Recombination In Mammalian Cells, Shen Li

Theses and Dissertations

Homologous recombination (HR) serves critical roles in DNA repair to maintain genome stability, and the malfunction of HR contributes to carcinogenesis and cancer development. Current research focuses on the regulation against deleterious recombination between imperfectly matching sequences, which has been documented in certain myeloid leukemias, hereditary nonpolyposis colorectal cancers and other genetic diseases. Homology dependency of recombination was examined in cultured thymidine kinase-deficient mouse fibroblasts. Cells have chromosomal integration of DNA constructs harboring a herpes tk gene (the “recipient”) and a closely linked truncated “donor” tk sequence. The recipient was rendered non-functional by insertion of the recognition site for endonuclease …

Identifying Associations Between Religious Commitment And Preventive Health Behaviors In A Southeastern Rural County, Nathan A. Peters

Theses and Dissertations

Health disparities within the United States (US) are continuing to impact ethnic minorities living in rural areas nationwide. In response, there is growing interest in using faith-based settings as vehicles to deliver much needed disease prevention interventions. However, few studies have identified the relationship between private and public religious commitment, individually, and the behaviors or risk factors associated with chronic disease. The purpose of this study was to observe the association between religious commitment, both private (i.e., time spent trying to grow in one’s religious understanding) and public (i.e., frequency of attendance, time spent in fellowship with others) individually, and …

Muscle Inflammatory Signaling Regulates Eccentric Contraction-Induced Protein Synthesis During Cancer Cachexia, Justin Perry Hardee

Theses and Dissertations

Cancer-related cachexia is a complex metabolic syndrome that involves the unintentional loss of skeletal muscle mass that cannot be reversed by standard nutritional intervention. Skeletal muscle mass depletion directly impacts patient survival and life quality, and therefore treatments that preserve muscle mass and function may have significant implications for cancer patient treatment and survival. Systemic and muscle inflammation has been implicated in the regulation of skeletal muscle homeostasis, and the cytokine interleukin-6 (IL-6) and muscle gp130 receptor signaling have established roles in cancer-induced muscle wasting. Resistance exercise is a nonpharmacological treatment that can improve physical function and metabolic health in …

Molecular Exploration Of Bioavailable Dissolved Organic Matter Across Aquatic Ecosystems, Yuan Shen

Theses and Dissertations

Dissolved organic matter (DOM) in aquatic ecosystems is a large reservoir of reduced carbon that is mostly resistant to degradation. A small fraction of DOM cycles relatively quickly and is biologically utilized on timescales of days to months. This bioavailable DOM (BDOM) supports aquatic food webs, drives major elemental cycles, and is coupled to atmospheric CO2. Despite wide-ranging importance, bioavailability of DOM and its linkages to ecosystem properties (e.g., primary production, nutrients) are poorly characterized, particularly at the ecosystem level. Bioassay experiments are commonly used to determine BDOM, but this approach alters conditions and has limited spatial and temporal coverage. …

A Study Of Hepatic Purinergic Receptor X7 Molecular Mechanisms In Ectopic Intestinal Inflammation In Environmental Nafld, Varun Chandrashekaran

Theses and Dissertations

Due to the increased consumption of unhealthy foods rich in sugar and fat along with a highly sedentary lifestyle the prevalence of obesity has steadily increased in the United States and the rest of the world. In America about one third of the adult population is obese putting them at a greater risk for diseases such as cancer, cardio-vascular disorders, inflammation and metabolic diseases such as diabetes and non-alcoholic fatty liver disease (NAFLD). NAFLD can be classified into two major categories non-alcoholic fatty liver (NAFL) and non-alcoholic steato-hepatitis depending on the extent of damage which ranges from simple fat accumulation …

Patterns Of Participation And Performance In Youth Baseball Players, Amanda Arnold

Theses and Dissertations

Baseball is a popular sport to play in the United States, with approximately 13-17 million athletes participating across all levels of competition. Youth (9-12 years) and adolescent (13-18 years) players comprise the majority of this population playing at the club and high school levels, yet less than 10% of research studies include athletes <18 years old. Despite increased awareness of the risks surrounding sports participation, youth and adolescent baseball players continue to report overuse injuries at alarming rates.

The lack of high-quality research describing athletic performance and injury risk factors, such as sport specialization, in young athlete populations poses a significant knowledge gap in the literature. The current investigation sought to establish the incidence of upper extremity (UE) injuries while examining population-specific risk factors in …

Determining The Population Dynamics And Reproductive Life History Of Commercially Important Tunas In The Gulf Of Mexico, Katrina C. Hounchell

Theses and Dissertations

The Gulf of Mexico (GOM) is an important spawning ground for many commercially important fish species including yellowfin, skipjack, and blackfin tunas. In particular, it is an essential spawning habitat for Atlantic bluefin tuna, whose stock status is of great international concern. It is vital to the appropriate conservation management of these species to determine both the location of their spawning grounds and the genetic diversity found within them. Fish eggs are a fisheries-independent source of spawning information that can provide more accurate estimates of spawning sites compared to larvae. This study describes population diversity and reproductive life histories in …

Wind Driven Shelf Circulation: Effects Of Shoreline Orientation, Bathymetry, And Surface Cooling, Xiaodong Wu

Theses and Dissertations

The dynamic region extending from the inner- to outer-shelf is the nearshore region where an accurate understanding of the development of cross-shore flows is important as they control the exchange of constituents (e.g., pollutants, larvae, heat and biota) between the coastline and the open ocean. These flows are driven by a variety of forces, including wind and buoyancy. The wind forcing relevant to shelf circulation broadly falls within the synoptic scale of storm events, consisting of frontal systems (cold and warm fronts) and tropical storms. The buoyancy on the shelf is characterized by a vertical stratification or a pronounced cross-shore …

The Regulation Of Glycoprotein130 Dependent Inflammatory Cytokines One Basal And Mechanical Stimuli Induced Protein Synthesis In Myotubes And Skeletal Muscles, Song Gao

Theses and Dissertations

Maintaining skeletal muscle mass has a well-documented role in health and quality of life. Two members of IL-6 family of cytokines, IL-6 and LIF, and have a paradoxical role in skeletal muscle mass regulation: short term elevation of IL-6 and LIF plays a key role in mechanical stimuli induced muscle growth and muscle hypertrophy, while the long term elevated IL-6 and LIF regulate muscle wasting during cancer cachexia by disrupting muscle protein turnover regulation. The regulation of muscle protein synthesis is an important determinant of mechanical stimuli induced muscle hypertrophy and muscle wasting during cancer cachexia. IL-6 family of cytokines …

The Nutrition Assistance Landscape In Afterschool Programs: Understanding The Gap Between Research, Policy, And Practice, Falon Elizabet Tilley

Theses and Dissertations

The Child and Adult Care Food Program (CACFP) aims to increase children’s access to healthful foods in out-of-home care. Approximately half of the 10.2 million children enrolled in afterschool programs (ASPs) are eligible for nutrition assistance through programs like CACFP. Despite awareness of its potential impact on the nutritional status of millions of children, CACFP is underutilized among ASPs and notably understudied in comparison to other federal nutrition assistance programs.

This dissertation addresses key gaps in CACFP research and provides a deeper understanding of the nutrition assistance landscape in afterschool programs by (1) assessing the type of afterschool snacks served …

Maternal Physical Activity And Cardiorespiratory Fitness During Pregnancy And Its Relation To Infant Size, Samantha M. Mcdonald

Theses and Dissertations

Recent evidence indicates that U.S.-born infants are larger today compared to 20 years ago. A strong determinant of neonatal size is maternal body mass, where larger mothers deliver larger infants. Consistent evidence indicates that higher levels of maternal physical activity (PA) during pregnancy reduce the risk of delivering a larger infant. However, this protective effect has only been demonstrated in normal weight pregnant women. Little is known about the relationship between maternal PA and neonatal size in overweight or obese pregnant women. Moreover, no studies have examined the association between maternal cardiorespiratory fitness (CRF), an indicator of habitual PA, on …

The Effect Of Energy-Matched Exercise Intensity On Brain-Derived Neurotrophic Factor And Motor Learning, Jessica F. Baird

Theses and Dissertations

Brain plasticity is important to motor learning, and is a critical component of motor rehabilitation. Exercise prior to motor training may facilitate plasticity by increasing brain-derived neurotrophic factor (BDNF). However, many studies that have investigated exercise-enhanced plasticity have assessed motor skill performance on tasks involving single finger button presses or small movements of a joystick, results that may not relate to more complex, real-world movements. Additionally, while high-intensity exercise has been shown to benefit motor learning, the effects of low-intensity exercise have yet to be fully investigated. A bout of low-intensity exercise, when completed at an energy expenditure that is …

Marine Phosphorus Biogeochemistry Ecological Insights From Analytical Chemistry, Douglas W. Bell

Theses and Dissertations

The supply of phosphorus (P) directly impacts the growth and speciation of marine microbes (i.e., phytoplankton, bacteria, Archaea). In turn, microbial communities shape the magnitude and rate of marine biogeochemical cycles, ultimately affecting global climate and food production. This dynamic reflects the continuum of temporal and spatial scales at which the marine P cycle operates. However, linking multiple scales of cycling remains a consistent challenge. The primary objective of my dissertation was to gain insight into marine P biogeochemistry, by means of analytical chemistry, at the molecular and environmental scales of cycling. The first component of my research was to …

The Role Of Lipocalin-2 In The Hepatic Microenvironment Of Colorectal Cancer Metastasis, Daniel Titus Hughes

Theses and Dissertations

Colorectal cancer (CRC) is the second leading cause of cancer deaths in the United States. The major cause of death is metastasis and the frequent target organ is the liver. When diagnosed early at a localized stage, the five year survival rate after resection is 90%. However, after metastasis has occurred, this drops to less than 12%. Metastasis is often asymptomatic and diagnosed at the final stage when therapeutic options are limited. Because of this, the genetic and cellular mechanisms regulating metastasis are still poorly understood. Recent studies have shown that prior to the arrival of cancer cells at the …