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Full-Text Articles in Engineering

Variable Rate Irrigation Of Maize And Soybean In West-Central Nebraska Under Full And Deficit Irrigation, J Burdette Barker, Sandeep Bhatti, Derek M. Heeren, Christopher M.U. Neale, Daran Rudnick Sep 2019

Variable Rate Irrigation Of Maize And Soybean In West-Central Nebraska Under Full And Deficit Irrigation, J Burdette Barker, Sandeep Bhatti, Derek M. Heeren, Christopher M.U. Neale, Daran Rudnick

Biological Systems Engineering: Papers and Publications

Variable rate irrigation (VRI) may improve center pivot irrigation management, including deficit irrigation. A remote-sensing-based evapotranspiration model was implemented with Landsat imagery to manage irrigations for a VRI equipped center pivot irrigated field located in West-Central Nebraska planted to maize in 2017 and soybean in 2018. In 2017, the study included VRI using the model, and uniform irrigation using neutron attenuation for full irrigation with no intended water stress (VRI-Full and Uniform-Full treatments, respectively). In 2018, two deficit irrigation treatments were added (VRI-Deficit and Uniform-Deficit, respectively) and the model was modified in an attempt to reduce water balance drift; model …


Microbial Transport As Affected By Residue Cover And Manure Application Rate, Lisa M. Durso, John E. Gilley, Dave B. Marx, Chance A. Thayer, Brian L. Woodbury Jul 2019

Microbial Transport As Affected By Residue Cover And Manure Application Rate, Lisa M. Durso, John E. Gilley, Dave B. Marx, Chance A. Thayer, Brian L. Woodbury

Biological Systems Engineering: Papers and Publications

Manure is applied to cropland areas with varying surface cover to meet single- or multiple-year crop nutrient requirements. The objectives of this field study were to (1) examine microbial transport following land application of manure to sites with and without wheat residue, (2) compare microbial loads following land application to meet the 0, 1, 2, 4, and 8-year P-based requirements for corn, and (3) evaluate the effects of rainfall simulation run on microbial transport. Manure was added and incorporated by disking plots that were 0.75 m wide by 2.0 m long. Three 30 min simulated rainfall events, separated by 24 …


High‑Throughput Analysis Of Leaf Physiological And Chemical Traits With Vis–Nir–Swir Spectroscopy: A Case Study With A Maize Diversity Panel, Yufeng Ge, Abbas Atefi, Huichun Zhang, Chenyong Miao, Raghuprakash Kastoori Ramamurthy, Brandi Sigmon, Jinliang Yang, James C. Schnable Jun 2019

High‑Throughput Analysis Of Leaf Physiological And Chemical Traits With Vis–Nir–Swir Spectroscopy: A Case Study With A Maize Diversity Panel, Yufeng Ge, Abbas Atefi, Huichun Zhang, Chenyong Miao, Raghuprakash Kastoori Ramamurthy, Brandi Sigmon, Jinliang Yang, James C. Schnable

Biological Systems Engineering: Papers and Publications

Hyperspectral reflectance data in the visible, near infrared and shortwave infrared range (VIS–NIR– SWIR, 400–2500 nm) are commonly used to nondestructively measure plant leaf properties. We investigated the usefulness of VIS–NIR–SWIR as a high-throughput tool to measure six leaf properties of maize plants including chlorophyll content (CHL), leaf water content (LWC), specific leaf area (SLA), nitrogen (N), phosphorus (P), and potassium (K). This assessment was performed using the lines of the maize diversity panel. Data were collected from plants grown in greenhouse condition, as well as in the field under two nitrogen application regimes. Leaf-level hyperspectral data were collected with …


A Spatially Enhanced Data‐Driven Multimodel To Improve Semiseasonal Groundwater Forecasts In The High Plains Aquifer, Usa, A. Amaranto, Francisco Munoz-Arriola, D. P. Solomatine, G. Corzo Jun 2019

A Spatially Enhanced Data‐Driven Multimodel To Improve Semiseasonal Groundwater Forecasts In The High Plains Aquifer, Usa, A. Amaranto, Francisco Munoz-Arriola, D. P. Solomatine, G. Corzo

Biological Systems Engineering: Papers and Publications

The aim of this paper is to improve semiseasonal forecast of groundwater availability in response to climate variables, surface water availability, groundwater level variations, and human water management using a two‐step data‐driven modeling approach. First, we implement an ensemble of artificial neural networks (ANNs) for the 300 wells across the High Plains aquifer (USA). The modeling framework includes a method to choose the most relevant input variables and time lags; an assessment of the effect of exogenous variables on the predictive capabilities of models; and the estimation of the forecast skill based on the Nash‐Sutcliffe efficiency (NSE) index, the normalized …


Environmental And Occupational Impacts From U.S. Beef Slaughtering Are Of Same Magnitude Of Beef Foodborne Illnesses On Human Health, Shaobin Li, Jeyamkondan Subbiah, Bruce Dvorak Jun 2019

Environmental And Occupational Impacts From U.S. Beef Slaughtering Are Of Same Magnitude Of Beef Foodborne Illnesses On Human Health, Shaobin Li, Jeyamkondan Subbiah, Bruce Dvorak

Biological Systems Engineering: Papers and Publications

Foodborne pathogens and occupational hazards are two primary safety concerns for U.S. beef slaughterhouses. The anthropogenic environmental impacts due to intensive resource use and pollution also exert threats to human health. Quantifying human health impacts from various sources remain a grand sustainability challenge for U.S. beef industry. We develop a framework to systematically estimate and compare human health impacts associated with U.S. beef foodborne illnesses from major pathogens and environmental impacts and occupational hazards from U.S. beef slaughtering on a common metric, disability-adjusted life year (DALY). Foodborne illnesses and occupational hazards are estimated by synthesizing published data and methodologies while …


Field Evidence Of A Natural Capillary Barrier In A Gravel Alluvial Aquifer, Todd Halihan, Ronald B. Miller, David Correll, Derek M. Heeren, Garey A. Fox May 2019

Field Evidence Of A Natural Capillary Barrier In A Gravel Alluvial Aquifer, Todd Halihan, Ronald B. Miller, David Correll, Derek M. Heeren, Garey A. Fox

Biological Systems Engineering: Papers and Publications

Ozark streams commonly feature “composite” floodplains, in which the vadose zone consists of silt or silt loam soils (?1 m thick) overlying gravel subsoil. Previous work has shown that preferential flow paths can exist within the gravel subsoil, which can conduct water and P at rates exceeding the sorption capacity of the gravel. At a site on Barren Fork Creek, a 1- by 1-m infiltration plot was constructed and an infiltration experiment was performed using sequentially introduced solutes including P (the constituent of regulatory interest), Rhodamine-WT (Rh-WT, a visual tracer), and Cl− (an electrical tracer). The solute transport was measured …


Wheat Strip Effects On Microbial Transport Following Variable Applications Of Beef Cattle Manure, Lisa M. Durso, John E. Gilley, David B. Marx, Chance A. Thayer, Bryan L. Woodbury Apr 2019

Wheat Strip Effects On Microbial Transport Following Variable Applications Of Beef Cattle Manure, Lisa M. Durso, John E. Gilley, David B. Marx, Chance A. Thayer, Bryan L. Woodbury

Biological Systems Engineering: Papers and Publications

Vegetative filter strips (VFS) consisting of perennial vegetation have been successfully used to reduce the transport of contaminants in runoff from land application areas. The effectiveness of a winter wheat strip, which may be more acceptable to producers, in reducing microbial transport was examined in this study. A 1.4 m wheat strip was used to allow direct comparison with experimental results obtained in previous studies. Beef cattle manure was applied to 0.75 m wide by 4.0 m long plots established on an Aksarben silty clay loam located in southeast Nebraska. Manure was added at rates required to meet the 0- …


Evaluation Of Selected Watershed Characteristics To Identify Best Management Practices To Reduce Nebraskan Nitrate Loads From Nebraska To The Mississippi/Atchafalaya River Basin, Aaron R. Mittelstet, Troy E. Gilmore, Tiffany Messer, Daran Rudnick, Thomas Heatherly Mar 2019

Evaluation Of Selected Watershed Characteristics To Identify Best Management Practices To Reduce Nebraskan Nitrate Loads From Nebraska To The Mississippi/Atchafalaya River Basin, Aaron R. Mittelstet, Troy E. Gilmore, Tiffany Messer, Daran Rudnick, Thomas Heatherly

Biological Systems Engineering: Papers and Publications

Nebraskan streams contribute excess nitrogen to the Mississippi/Atchafalaya River Basin and Gulf of Mexico, which results in major water-quality impairments. Reducing the amount of nitrogen (N) exported in these streams requires the use of best management practices (BMPs) within the landscape. However, proper BMP utilization has rarely been statistically connected to potential controls of N export within watersheds, particularly precipitation and soil characteristics. In this study, 19 watershed variables were evaluated in five categories (hydrological, physiographic, point sources, land use, and soil properties) to determine the characteristics that influenced variable nitrate nitrogen (NO3-N) concentrations in 17 Nebraska watersheds …


Quantifying And Correcting For Clay Content Effects On Soil Water Measurement By Reflectometers, Jasreman Singh, Tsz Him Lo, Daran Rudnick, Suat Irmak, Humberto Blanco-Canqui Feb 2019

Quantifying And Correcting For Clay Content Effects On Soil Water Measurement By Reflectometers, Jasreman Singh, Tsz Him Lo, Daran Rudnick, Suat Irmak, Humberto Blanco-Canqui

Biological Systems Engineering: Papers and Publications

The presence of clay particles increases the specific surface area of a soil and can affect the calibration of electromagnetic soil water sensors including reflectometers. To quantify and correct for this effect in two relatively new reflectometers, three TDR315 and three CS655 sensors were installed in each of five soils with clay content ranging from 5 to 49%. As the soils were dried in a temperature controlled room, sensor reported soil volumetric water content (θv) according to the factory calibration was compared against reference θv determined by weighing the soils. Sensor reported θv was similar to …


Aesthetics, Ethics, And Lose-Lose Dilemmas In The Anthropocen, Adam Liska Feb 2019

Aesthetics, Ethics, And Lose-Lose Dilemmas In The Anthropocen, Adam Liska

Biological Systems Engineering: Papers and Publications

Anthropogenic climate change will cause violence to increase globally, and nonlinear increases in sea level could cause a major escalation in global conflict. After 2100, a 22-meter sea-level rise is estimated here to dislocate two billion people from coastal areas. These impending civilization-changing events require us to again reevaluate our prevalent aesthetic preferences for luxury that produce a significant fraction of anthropogenic greenhouse gas emissions. Due to industrial inertia, a central dilemma discussed here is the contradictions between the goals and impacts of aesthetics and ethics. Either we lose our own well-being (a loss of high-emission aesthetics) for the benefit …


Deficit Irrigation Management Of Maize In The High Plains Aquifer Region: A Review, Daran Rudnick, Sibel Irmak, C. West, J.L. Chavez, I. Kisekka, T.H. Marek, J.P. Schneekloth, D. Mitchell Mccallister, V. Sharma, K. Djaman, J. Aguilar, M.E. Schipanski, D.H. Rogers, A. Schlegel Feb 2019

Deficit Irrigation Management Of Maize In The High Plains Aquifer Region: A Review, Daran Rudnick, Sibel Irmak, C. West, J.L. Chavez, I. Kisekka, T.H. Marek, J.P. Schneekloth, D. Mitchell Mccallister, V. Sharma, K. Djaman, J. Aguilar, M.E. Schipanski, D.H. Rogers, A. Schlegel

Biological Systems Engineering: Papers and Publications

Irrigated agriculture is a major economic contributor of the High Plains Region and it primarily relies on the High Plains Aquifer as a source of water. Over time, areas of the High Plains Aquifer have experienced drawdowns limiting its ability to supply sufficient water to sustain fully irrigated crop production. This among other reasons, including variable climatic factors and differences in state water policy, has resulted in some areas adopting and practicing deficit irrigation management. Considerable research has been conducted across the High Plains Aquifer region to identify locally appropriate deficit irrigation strategies. This review summarizes and discusses research conducted …


Biomaterial Substrate Modifications That Influence Cell-Material Interactions To Prime Cellular Responses To Nonviral Gene Delivery, Amy Mantz, Angela K. Pannier Feb 2019

Biomaterial Substrate Modifications That Influence Cell-Material Interactions To Prime Cellular Responses To Nonviral Gene Delivery, Amy Mantz, Angela K. Pannier

Biological Systems Engineering: Papers and Publications

Gene delivery is the transfer of exogenous genetic material into somatic cells to modify their gene expression, with applications including tissue engineering, regenerative medicine, sensors and diagnostics, and gene therapy. Viral vectors are considered the most effective system to deliver nucleic acids, yet safety concerns and many other disadvantages have resulted in investigations into an alternative option, i.e. nonviral gene delivery. Chemical nonviral gene delivery is typically accomplished by electrostatically complexing cationic lipids or polymers with negatively charged nucleic acids. Unfortunately, nonviral gene delivery suffers from low efficiency due to barriers that impede transfection success, including intracellular processes such as …


Minimal Interspecies Interaction Adjustment (Miia): Inference Of Neighbor-Dependent Interactions In Microbial Communities, Hyun-Seob Song, Joon-Yong Lee, Shin Haruta, William C. Nelson, Dong-Yup Lee, Stephen R. Lindemann, Jim K. Fredrickson, Hans C. Bernstein Jan 2019

Minimal Interspecies Interaction Adjustment (Miia): Inference Of Neighbor-Dependent Interactions In Microbial Communities, Hyun-Seob Song, Joon-Yong Lee, Shin Haruta, William C. Nelson, Dong-Yup Lee, Stephen R. Lindemann, Jim K. Fredrickson, Hans C. Bernstein

Biological Systems Engineering: Papers and Publications

An intriguing aspect in microbial communities is that pairwise interactions can be influenced by neighboring species. This creates context dependencies for microbial interactions that are based on the functional composition of the community. Context dependent interactions are ecologically important and clearly present in nature, yet firmly established theoretical methods are lacking from many modern computational investigations. Here, we propose a novel network inference method that enables predictions for interspecies interactions affected by shifts in community composition and species populations. Our approach first identifies interspecies interactions in binary communities, which is subsequently used as a basis to infer modulation in more …


Heterologous Expression And Functional Characterization Of A Gh10 Endoxylanase From Aspergillus Fumigatus Var. Niveus With Potential Biotechnological Application, Josman Velasco, Bianca Oliva, Evandro Jose Mulinari, Leidy Patricia Quintero, Awana Da Silva Lima, Aline Larissa Goncalves, Thiago Augusto Goncalves, Andre Damasio, Fabio Marcio Squina, Adriane Maria Ferreira Milagres, Asmaa Abdella, Mark R. Wilkins, Fernando Segato Jan 2019

Heterologous Expression And Functional Characterization Of A Gh10 Endoxylanase From Aspergillus Fumigatus Var. Niveus With Potential Biotechnological Application, Josman Velasco, Bianca Oliva, Evandro Jose Mulinari, Leidy Patricia Quintero, Awana Da Silva Lima, Aline Larissa Goncalves, Thiago Augusto Goncalves, Andre Damasio, Fabio Marcio Squina, Adriane Maria Ferreira Milagres, Asmaa Abdella, Mark R. Wilkins, Fernando Segato

Biological Systems Engineering: Papers and Publications

Xylanases decrease the xylan content in pretreated biomass releasing it from hemicellulose, thus improving the accessibility of cellulose for cellulases. In this work, an endo-β-1,4-xylanase from Aspergillus fumigatus var. niveus (AFUMN-GH10) was successfully expressed. The structural analysis and biochemical characterization showed this AFUMN-GH10 does not contain a carbohydrate-binding module. The enzyme retained its activity in a pH range from 4.5 to 7.0, with an optimal temperature at 60°C. AFUMN-GH10 showed the highest activity in beechwood xylan. The mode of action of AFUMNGH10 was investigated by hydrolysis of APTS-labeled xylohexaose, which resulted in xylotriose and xylobiose as the main products. AFUMN-GH10 …


Antibiotic Resistance Gene Profile Changes In Cropland Soil After Manure Application And Rainfall, Morgan Meyers, Lisa Durso, John E. Gilley, Heidi Waldrip, Lana Castleberry, Amy Millmier Schmidt Jan 2019

Antibiotic Resistance Gene Profile Changes In Cropland Soil After Manure Application And Rainfall, Morgan Meyers, Lisa Durso, John E. Gilley, Heidi Waldrip, Lana Castleberry, Amy Millmier Schmidt

Biological Systems Engineering: Papers and Publications

Land application of manure introduces gastrointestinal microbes into the environment, including bacteria carrying antibiotic resistance genes (ARGs). Measuring soil ARGs is important for active stewardship efforts to minimize gene flow from agricultural production systems; however, the variety of sampling protocols and target genes makes it difficult to compare ARG results between studies. We used polymerase chain reaction (PCR) methods to characterize and/or quantify 27 ARG targets in soils from 20 replicate, long-term no-till plots, before and after swine manure application and simulated rainfall and runoff. All samples were negative for the 10 b-lactamase genes assayed. For tetracycline resistance, only source …


System For Optimizing Fed-Batch Hydrolysis Of Biomass, Chao Tai, Deepak R. Keshwani Jan 2019

System For Optimizing Fed-Batch Hydrolysis Of Biomass, Chao Tai, Deepak R. Keshwani

Biological Systems Engineering: Papers and Publications

Provided herein is a system for optimizing the fed - batch hydrolysis of biomass.


Free Polyethylenimine Enhances Substrate-Mediated Gene Delivery On Titanium Substrates Modified With Rgd-Functionalized Poly(Acrylic Acid) Brushes, Amy Mantz, Alice Rosenthal, Eric Farris, Tyler Kozisek, Eva Bittrich, Saghar Nazari, Eva Schubert, Mathias Schubert, Manfred Stamm, Petra Uhlmann, Angela K. Pannier Jan 2019

Free Polyethylenimine Enhances Substrate-Mediated Gene Delivery On Titanium Substrates Modified With Rgd-Functionalized Poly(Acrylic Acid) Brushes, Amy Mantz, Alice Rosenthal, Eric Farris, Tyler Kozisek, Eva Bittrich, Saghar Nazari, Eva Schubert, Mathias Schubert, Manfred Stamm, Petra Uhlmann, Angela K. Pannier

Biological Systems Engineering: Papers and Publications

Substrate mediated gene delivery (SMD) is a method of immobilizing DNA complexes to a substrate via covalent attachment or nonspecific adsorption, which allows for increased transgene expression with less DNA compared to traditional bolus delivery. It may also increase cells receptivity to transfection via cell-material interactions. Substrate modifications with poly(acrylic) acid (PAA) brushes may improve SMD by enhancing substrate interactions with DNA complexes via tailored surface chemistry and increasing cellular adhesion via moieties covalently bound to the brushes. Previously, we described a simple method to graft PAA brushes to Ti and further demonstrated conjugation of cell adhesion peptides (i.e., RGD) …


Genetic Diversity And Population Structure Of A Camelina Sativa Spring Panel, Zinan Luo, Jordan Brock, John M. Dyer, Toni Kutchan, Daniel P. Schachtman, Megan Augustin, Yufeng Ge, Noah Fahlgren, Hussein Abdel-Haleem Jan 2019

Genetic Diversity And Population Structure Of A Camelina Sativa Spring Panel, Zinan Luo, Jordan Brock, John M. Dyer, Toni Kutchan, Daniel P. Schachtman, Megan Augustin, Yufeng Ge, Noah Fahlgren, Hussein Abdel-Haleem

Biological Systems Engineering: Papers and Publications

There is a need to explore renewable alternatives (e.g., biofuels) that can produce energy sources to help reduce the reliance on fossil oils. In addition, the consumption of fossil oils adversely affects the environment and human health via the generation of waste water, greenhouse gases, and waste solids. Camelina sativa, originated from southeastern Europe and southwestern Asia, is being re-embraced as an industrial oilseed crop due to its high seed oil content (36–47%) and high unsaturated fatty acid composition (>90%), which are suitable for jet fuel, biodiesel, high-value lubricants and animal feed. C. sativa’s agronomic advantages include …


Economic Analysis Of Deficit Irrigation In Sugarcane Farming: Nchalo Estate, Chikwawa District, Malawi, Mavuto M. Banda, Derek M. Heeren, Derrel Martin, Francisco Munoz-Arriola, László G. Hayde Jan 2019

Economic Analysis Of Deficit Irrigation In Sugarcane Farming: Nchalo Estate, Chikwawa District, Malawi, Mavuto M. Banda, Derek M. Heeren, Derrel Martin, Francisco Munoz-Arriola, László G. Hayde

Biological Systems Engineering: Papers and Publications

Sustenance of the growing world population calls for increased agricultural production. However, this will have to be done while forecasts of water withdrawals on a global scale predict sharp increases in future demand to meet human needs. The inadequacy of irrigation water supplies has led to the need to consider deficit irrigation (DI) as a water saving strategy. DI is a deliberate under-application of water to growing crops.

In this study we carried out an economic analysis of DI in sugarcane farming with an aim of developing an understanding of the economic impact of various irrigation water management strategies. The …


The Development Of The Infews-Er: A Virtual Resource Center For Transdisciplinary Graduate Student Training At The Nexus Of Food, Energy, And Water, Luis F. Rodriguez, Anna-Maria Marshall, Dan Cotton, Richard K. Koelsch, Jacek Koziel, Deanne Meyer, Dan Steward, Jill Heemstra, Anand Padmanabahn, John Classen, Nathan J. Meyer, Benjamin L. Ruddell, Sean M. Ryan, Ximing Cai, Emad Habib, Peter D. Saundry Jan 2019

The Development Of The Infews-Er: A Virtual Resource Center For Transdisciplinary Graduate Student Training At The Nexus Of Food, Energy, And Water, Luis F. Rodriguez, Anna-Maria Marshall, Dan Cotton, Richard K. Koelsch, Jacek Koziel, Deanne Meyer, Dan Steward, Jill Heemstra, Anand Padmanabahn, John Classen, Nathan J. Meyer, Benjamin L. Ruddell, Sean M. Ryan, Ximing Cai, Emad Habib, Peter D. Saundry

Biological Systems Engineering: Papers and Publications

Problems at the nexus of Food, Energy and Water Systems (FEWS) are among the most complex challenges we face. Spanning simple to complex temporal, geographic, social, and political framings, the questions raised at this nexus require multidisciplinary if not transdisciplinary approaches. Answers to these questions must draw from engineering, the physical and biological sciences, and the social sciences. Practical solutions depend upon a wide community of stakeholders, including industry, policymakers, and the general public. Yet there are many obstacles to working in a transdisciplinary environment: unfamiliar concepts, specialized terminology, and countless “blind” spots. Graduate education occurs in disciplinary ‘silos’, often …


Water Effects On Optical Canopy Sensing For Late-Season Site-Specific Nitrogen Management Of Maize, Tsz Him Lo, Daran Rudnick, Brian Krienke, D. M. Heeren, Yufeng Ge, Tim M. Shaver Jan 2019

Water Effects On Optical Canopy Sensing For Late-Season Site-Specific Nitrogen Management Of Maize, Tsz Him Lo, Daran Rudnick, Brian Krienke, D. M. Heeren, Yufeng Ge, Tim M. Shaver

Biological Systems Engineering: Papers and Publications

The interpretation of optical canopy sensor readings for determining optimal rates of late-season site-specific nitrogen application to corn (Zea mays L.) can be complicated by spatially variable water sufficiency, which can also affect canopy size and/or pigmentation. In 2017 and 2018, corn following corn and corn following soybeans were subjected to irrigation×nitrogen fertilizer treatments in west central Nebraska, USA, to induce variable water sufficiency and variable nitrogen sufficiency. The vegetation index-sensor combinations investigated were the normalized difference vegetation index (NDVI), the normalized difference red edge index (NDRE), and the reflectance ratio of near infrared minus red edge over near …


Narrow Grass Hedge Effects On Microbial Transport Following Variable Applications Of Beef Cattle Manure, Lisa M. Durso, John E. Gilley, Dave B. Marx, Brian L. Woodbury Jan 2019

Narrow Grass Hedge Effects On Microbial Transport Following Variable Applications Of Beef Cattle Manure, Lisa M. Durso, John E. Gilley, Dave B. Marx, Brian L. Woodbury

Biological Systems Engineering: Papers and Publications

The effectiveness of a 1.4 m wide grass hedge in reducing microbial transport following manure application was examined in this study. Beef cattle manure was applied to 0.75 m wide by 4.0 m long plots established on an Aksarben silty clay loam located in southeast Nebraska. Manure was added at rates required to meet none or the 1-, 2-, or 4-year nitrogen requirements for corn. The transport of phages, total coliforms, E. coli, and enterococci was measured for three 30 min simulated rainfall events, which were separated by approximately 24 h intervals. The narrow grass hedge reduced total counts of …


Identifying Advantages And Disadvantages Of Variable Rate Irrigation – An Updated Review, S. A. O’Shaughnessy, Steve R. Evett, Paul D. Colaizzi, Manuel A. Andrade, Thomas H. Marek, Derek M. Heeren, Freddie R. Lamm, Jacob L. Larue Jan 2019

Identifying Advantages And Disadvantages Of Variable Rate Irrigation – An Updated Review, S. A. O’Shaughnessy, Steve R. Evett, Paul D. Colaizzi, Manuel A. Andrade, Thomas H. Marek, Derek M. Heeren, Freddie R. Lamm, Jacob L. Larue

Biological Systems Engineering: Papers and Publications

Variable rate irrigation (VRI) sprinklers on mechanical move irrigation systems (center pivot or lateral move) have been commercially available since 2004. Although the number of VRI, zone or individual sprinkler, systems adopted to date is lower than expected there is a continued interest to harness this technology, especially when climate variability, regulatory nutrient management, water conservation policies, and declining water for agriculture compound the challenges involved for irrigated crop production. This article reviews the potential advantages and potential disadvantages of VRI technology for moving sprinklers, provides updated examples on such aspects, suggests a protocol for designing and implementing VRI technology …


Principal Variable Selection To Explain Grain Yield Variation In Winter Wheat From Features Extracted From Uav Imagery, Jiating Li, Arun-Narenthiran Veeranampalayam-Sivakumar, Madhav Bhatta, Nicholas D. Garst, Hannah Stoll, P. Stephen Baenziger, Vikas Belamkar, Reka Howard, Yufeng Ge, Jiating Li Jan 2019

Principal Variable Selection To Explain Grain Yield Variation In Winter Wheat From Features Extracted From Uav Imagery, Jiating Li, Arun-Narenthiran Veeranampalayam-Sivakumar, Madhav Bhatta, Nicholas D. Garst, Hannah Stoll, P. Stephen Baenziger, Vikas Belamkar, Reka Howard, Yufeng Ge, Jiating Li

Biological Systems Engineering: Papers and Publications

Background: Automated phenotyping technologies are continually advancing the breeding process. However, collecting various secondary traits throughout the growing season and processing massive amounts of data still take great efforts and time. Selecting a minimum number of secondary traits that have the maximum predictive power has the potential to reduce phenotyping efforts. The objective of this study was to select principal features extracted from UAV imagery and critical growth stages that contributed the most in explaining winter wheat grain yield. Five dates of multispectral images and seven dates of RGB images were collected by a UAV system during the spring growing …


Agenator: An Open Source Computer-Controlled Dry Aging System For Beef, Soon Kiat Lau, Felipe Azevedo Ribeiro, Jeyamkondan Subbiah, Chris R. Calkins Jan 2019

Agenator: An Open Source Computer-Controlled Dry Aging System For Beef, Soon Kiat Lau, Felipe Azevedo Ribeiro, Jeyamkondan Subbiah, Chris R. Calkins

Biological Systems Engineering: Papers and Publications

Dry aging of beef is a process where beef is exposed to a controlled environment with the ultimate goal of drying the beef to improve its quality and value. Comprehensive investigations into the effects of various environmental conditions on dry aging are crucial for understanding and optimizing the process, but the lack of affordable equipment focused on data collection makes it difficult to do so. The Agenator was thus developed as an open source system with a suite of features for investigating dry aging such as: measuring and recording relative humidity, temperature, mass, air velocity, and fan rotational speed; precise …


A Machine Learning Approach For Improving Near-Real-Time Satellite-Based Rainfall Estimates By Integrating Soil Moisture, Ashish Kumar, Raaj Ramsankaran, Luca Brocca, Francisco Munoz-Arriola Jan 2019

A Machine Learning Approach For Improving Near-Real-Time Satellite-Based Rainfall Estimates By Integrating Soil Moisture, Ashish Kumar, Raaj Ramsankaran, Luca Brocca, Francisco Munoz-Arriola

Biological Systems Engineering: Papers and Publications

Near-real-time (NRT) satellite-based rainfall estimates (SREs) are a viable option for flood/drought monitoring. However, SREs have often been associated with complex and nonlinear errors. One way to enhance the quality of SREs is to use soil moisture information. Few studies have indicated that soil moisture information can be used to improve the quality of SREs. Nowadays, satellite-based soil moisture products are becoming available at desired spatial and temporal resolutions on an NRT basis. Hence, this study proposes an integrated approach to improve NRT SRE accuracy by combining it with NRT soil moisture through a nonlinear support vector machine-based regression (SVR) …


High-Speed, High-Frequency Ultrasound, In Utero Vector-Flow Imaging Of Mouse Embryos, Jeffrey A. Ketterling, Orlando Aristizabal, Billy Y. S. Yiu, Daniel H. Turnbull, Colin K. L. Phoon, Alfred C. H. Yu, Ronald H. Silverman Jan 2019

High-Speed, High-Frequency Ultrasound, In Utero Vector-Flow Imaging Of Mouse Embryos, Jeffrey A. Ketterling, Orlando Aristizabal, Billy Y. S. Yiu, Daniel H. Turnbull, Colin K. L. Phoon, Alfred C. H. Yu, Ronald H. Silverman

Biological Systems Engineering: Papers and Publications

Real-time imaging of the embryonic murine cardiovascular system is challenging due to the small size of the mouse embryo and rapid heart rate. High-frequency, linear-array ultrasound systems designed for small-animal imaging provide high-frame-rate and Doppler modes but are limited in regards to the field of view that can be imaged at fine-temporal and -spatial resolution. Here, a plane-wave imaging method was used to obtain high-speed image data from in utero mouse embryos and multi-angle, vector-flow algorithms were applied to the data to provide information on blood flow patterns in major organs. An 18-MHz linear array was used to acquire plane-wave …


Factors Related To Intra-Tendinous Morphology Of Achilles Tendon In Runners, Kai-Yu Ho, Ari Baquet, Yu-Jen Chang, Lung-Chang Chien, Michelle Harty, Gregory Bashford, Kornelia Kulig Jan 2019

Factors Related To Intra-Tendinous Morphology Of Achilles Tendon In Runners, Kai-Yu Ho, Ari Baquet, Yu-Jen Chang, Lung-Chang Chien, Michelle Harty, Gregory Bashford, Kornelia Kulig

Biological Systems Engineering: Papers and Publications

The purpose of this study was to determine and explore factors (age, sex, anthropometry, running and injury/pain history, tendon gross morphology, neovascularization, ankle range of motion, and ankle plantarflexor muscle endurance) related to intra-tendinous morphological alterations of the Achilles tendon in runners. An intra-tendinous morphological change was defined as collagen fiber disorganization detected by a low peak spatial frequency radius (PSFR) obtained from spatial frequency analysis (SFA) techniques in sonography. Ninety-one runners (53 males and 38 females; 37.9 ± 11.6 years) with 8.8 ± 7.3 years of running experience participated. Height, weight, and waist and hip circumferences were recorded. Participants …


Rapeseed Seedling Stand Counting And Seeding Performance Evaluation At Two Early Growth Stages Based On Unmanned Aerial Vehicle Imagery, Biquan Zhao, Jian Zhang, Chenghai Yang, Guangsheng Zhou, Youchun Ding, Yeyin Shi, Dongyan Zhang, Jing Xie, Qingxi Liao Jan 2019

Rapeseed Seedling Stand Counting And Seeding Performance Evaluation At Two Early Growth Stages Based On Unmanned Aerial Vehicle Imagery, Biquan Zhao, Jian Zhang, Chenghai Yang, Guangsheng Zhou, Youchun Ding, Yeyin Shi, Dongyan Zhang, Jing Xie, Qingxi Liao

Biological Systems Engineering: Papers and Publications

The development of unmanned aerial vehicles (UAVs) and image processing algorithms for field-based phenotyping offers a non-invasive and effective technology to obtain plant growth traits such as canopy cover and plant height in fields. Crop seedling stand count in early growth stages is important not only for determining plant emergence, but also for planning other related agronomic practices. The main objective of this research was to develop practical and rapid remote sensing methods for early growth stage stand counting to evaluate mechanically seeded rapeseed (Brassica napus L.) seedlings. Rapeseed was seeded in a field by three different seeding devices. A …


Early Prediction Of Soybean Traits Through Color And Texture Features Of Canopy Rgb Imagery, Wenan Yuan, Nuwan Kumara Wijewardane, Shawn Jenkins, Geng Bai, Yufeng Ge, George L. Graef Jan 2019

Early Prediction Of Soybean Traits Through Color And Texture Features Of Canopy Rgb Imagery, Wenan Yuan, Nuwan Kumara Wijewardane, Shawn Jenkins, Geng Bai, Yufeng Ge, George L. Graef

Biological Systems Engineering: Papers and Publications

Global crop production is facing the challenge of a high projected demand, while the yields of major crops are not increasing at sufficient speeds. Crop breeding is an important way to boost crop productivity, however its improvement rate is partially hindered by the long crop generation cycles. If end-season crop traits such as yield can be predicted through early-season phenotypic measurements, crop selection can potentially be made before a full crop generation cycle finishes. This study explored the possibility of predicting soybean end-season traits through the color and texture features of early-season canopy images. Six thousand three hundred and eighty-three …