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Aquaponics Experiment For Njit Stem For Success, Christopher Tava

STEM Month

As a member of STEM for Success, I was responsible for constructing and promoting a functioning aquaponics system for the benefit of fifth grade students. With the help of NJIT funding, I was able to design, rapid prototype, and then implement a sustainable aquaponics system that was able to grow lettuce, tomatoes, and kale. Multiple challenges in the design process led to changes, further research, and the implementation of new solutions, as described in detail. Using the aquaponics knowledge gained from the experimental phase, I then led community outreach to elementary schools in my local area. Aquaponics possesses a variety …

Influence Of Four Veterinary Antibiotics On Constructed Treatment Wetland Nitrogen Transformation, Matthew V. Russell, Tiffany L. Messer, Deborah A. Repert, Richard L. Smith, Shannon L. Bartelt-Hunt, Daniel D. Snow, Ariel P. Reed

Department of Civil and Environmental Engineering: Faculty Publications

The use of wetlands as a treatment approach for nitrogen in runoff is a common practice in agroecosystems. However, nitrate is not the sole constituent present in agricultural runoff and other biologically active contaminants have the potential to affect nitrate removal efficiency. In this study, the impacts of the combined effects of four common veterinary antibiotics (chlortetracycline, sulfamethazine, lincomycin, monensin) on nitrate-N treatment efficiency in saturated sediments and wetlands were evaluated in a coupled microcosm/mesocosm scale experiment. Veterinary antibiotics were hypothesized to significantly impact nitrogen speciation (e.g., nitrate and ammonium) and nitrogen uptake and transformation processes (e.g., plant uptake and …

Effect Of Tannin In Animal Diet On Nitrification Rate Of Pasture Soil Under Dung Patches, J R. Crush

IGC Proceedings (1993-2023)

The rate of formation of nitrate and ammonium in the soil under dung patches was compared for dung from animals fed either ryegrass (Lolium perenne)/white clover (Trifolium repens) or ryegrass/Lotus pedunculatus forage. Tannin derived from the Lotus did not inhibit ammonification in the soil under dung but nitrate formation was strongly inhibited. The results support the theory that polyphenolics may bind to nitrite in acid soils and cause immobilisation of mineral nitrogen. Apart from their effect of reducing the proportion of dietary nitrogen excreted in urine, tannins in animal diets may make a further contribution to …

Effect Of Ultrasound On The Stability Of Partial Nitrification: Under The Interference Of Aeration Rate, Ying Xie, Yichun Zhu, Jieyuan Yang, Guangming Zhang, Shuai Tian, Junfeng Lian, Shanyan Dong

Student and Faculty Publications

The fluctuation of dissolved oxygen is one of the primary cause of disruptions to the consistent operation of partial nitrification, and the level of dissolved oxygen is mainly controlled by the aeration rate. This study investigated the influence of ultrasonic treatment on the stability of partial nitrification of activated sludge under different aeration conditions. After being treated with ultrasound (energy density = 0.20 W·mL−1, treatment time = 10 min), partial nitrification process operated stably for 67 days, with the nitrite accumulation rate above 83.89 %. The effluent contained 42.50 mg·L−1 of nitrite, much higher than the control reactor (0.30 mg·L−1). …

Cattle Slurry Amended With Nitrification Inhibitors: Effects On Nitrous Oxide, Dinitrogen And Methane Emissions, J. P. Carneiro, L. Cardenas, D. Hatch, H. Trindade, J. Hawkins, David Scholefield, D. Chadwick

IGC Proceedings (1993-2023)

In recent decades, a very intensive dairy farming system has been developed in northern Portugal. Considering the appreciable amounts of slurry generated and the small farm areas for spreading, this activity involves large annual inputs of N with the risk of undesirable consequences for the environment. Emission of greenhouse gases from agricultural sources, such as N₂O (originating from nitrification and denitrification) and CH₄, therefore need to be reduced. The aim of this laboratory experiment was to evaluate the effectiveness of two nitrification inhibitors (dicyandiamide (DCD) and 3,4-dimethylpyrazole phosphate (DMPP)) in reducing nitrification and subsequent denitrification after …

Nanopesticide Influence On Nitrogen Cycling In Soils, Jacob Richardson

Theses and Dissertations--Biosystems and Agricultural Engineering

Nanotechnology has several applications in the agricultural industry, as the small size of nanoparticles and high reactivity enables targeted delivery of pesticides and fertilizers to the intended crop. Copper-based nanopesticides such as Kocide, are proposed as a more efficient method for targeted pest control. Despite the potential benefits of nanopesticides, little is known regarding the transport and implications of nanopesticides under long-term inundation conditions often found in downstream wetlands. Specifically, the impact of nanopesticides on microbial nitrogen processes in wetland environments remains unknown. Therefore, this thesis explores the impact of nanopesticides, specifically Kocide, on microbial nitrogen cycles in agricultural and …

Nitrite Cycling In The Primary Nitrite Maxima Of The Eastern Tropical North Pacific, Nicole M. Travis, Colette L. Kelly, Margaret R. Mulholland, Karen L. Casciotti

OES Faculty Publications

The primary nitrite maximum (PNM) is a ubiquitous feature of the upper ocean, where nitrite accumulates in a sharp peak at the base of the euphotic zone. This feature is situated where many chemical and hydrographic properties have strong gradients and the activities of several microbial processes overlap. Near the PNM, four major microbial processes are active in nitrite cycling: ammonia oxidation, nitrite oxidation, nitrate reduction and nitrite uptake. The first two processes are mediated by the nitrifying archaeal/bacterial community, while the second two processes are primarily conducted by phytoplankton. The overlapping spatial habitats and substrate requirements for these microbes …

Could The Use Of Nitrification Inhibitor Optimize The Nitrogen Use Efficiency Of Corn Production?, Pedro Morinigo, Dorivar A. Ruiz Diaz

Kansas Agricultural Experiment Station Research Reports

Nitrogen (N) is an essential nutrient for corn production, higher grain yields are depen­dent on N fertilizer application. Substances like the nitrification inhibitors (NI) were created to increase yields, promote nitrogen use efficiency (NUE), and reduce N losses. The study was carried out in ten site-years in Kansas from 2017 to 2021, with the objec­tive of evaluating the nitrogen agronomic efficiency (NAE) in corn with and without the use of NI and comparing corn grain yield, grain N uptake, and soil mineral nitrogen content with the use of the NI. Nitrogen fertilizer at the rates of 100, 150, and 200 …

Nitrification Inhibitor, Nitrogen Source, And Herbicide Effects On Soil Nitrogen Transformations And Corn Yield, William Neels

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Nitrogen fertilizer management continue to be challenging due to potential nitrogen losses under variable weather conditions. The objective of this was to evaluate the performance of nitrification inhibitors, nitrogen sources and herbicides on in-season nitrogen availability and agronomy indicators. A two site-year field experiment was conducted in silty clay loam soil in corn phase of the corn-soybean rotation at Central Nebraska. The treatments included three herbicide (no pre-emergence, Acuron, Resicore) and five nitrogen treatments: 1) control, 2) anhydrous ammonia, 3) anhydrous ammonia without nitrification inhibitor, 4) urea with nitrification inhibitors, and 5) urea without nitrification inhibitors. Results indicated that nitrogen …

Nutrient Removal From Recirculating Aquaculture System Water, Eliza M. Costigan

Electronic Theses and Dissertations

Recirculating aquaculture systems (RAS), where only approximately 10% of the total system water is exchanged per day, have grown in popularity in recent years due to their potential to provide a high-quality protein source in a contained environment. With increased production comes the need for RAS water treatment to mitigate recirculation and discharge of nutrients produced by fish; mainly phosphorus and nitrogen. When discharged, nutrients can contribute to eutrophication in surrounding water bodies, harming the fish and other aquatic life. Therefore, RAS effluent should be treated before discharge. One method of phosphorus removal is adsorption, a surface phenomenon that is …

Mercury Concentrations And Mercury Methylation Along The Freshwater To Marine Continuum, Lindsay D. Starr

Browse all Theses and Dissertations

Mercury (Hg) is a neurotoxin that can have detrimental impacts on the human nervous system and on brain development in infants. Methylmercury (MeHg) is the most toxic form of Hg and can concentrate to potentially harmful levels in higher levels of marine food webs. Production of MeHg in oxic water columns is poorly understood due to lack of knowledge of the mechanisms of formation and distribution. Recent work has reported widespread, putative Hg methylation genes in nitrite oxidizers, but any relationship with nitrifiers is unknown. This work focuses on Hg water column distribution, speciation, and methylation. The aims of this …

Environmental Effects On Constructed Wetland Microbial Diversity And Function In The Context Of Wastewater Management, Sandrine Grandmont-Lemire

Cal Poly Humboldt theses and projects

Microbial communities play a crucial role in ecosystems, yet we know little about how microbial diversity influences ecosystem functioning. An important gap in our understanding is how environmental change affects microbial Biodiversity-Ecosystem Function relationships (BEF). These complex interactions between microbial biodiversity and ecosystem function can influence major biogeochemical processes, such as the nitrogen cycle in wetland ecosystems, which play an important role in managing wastewater. To address the effect of biodiversity on function, my study investigates the BEF relationships between microbial diversity and the function in terms of ammonia removal from wastewater at the Arcata Wastewater Treatment Facility (AWTF) both …

Mercury Methylation In Oxic Sub-Polar Marine Regions Linked With Nitrification, Marissa Collins Despins

Browse all Theses and Dissertations

Methylmercury (MeHg) is a neurotoxin that bioaccumulates to potentially harmful concentrations in Arctic marine wildlife and in those that consume them. Monitoring and modeling MeHg bioaccumulation and biogeochemical cycling in the ocean requires understanding of the mechanisms behind net mercury (Hg) methylation. The key functional gene for Hg methylation, hgcAB, is widely distributed throughout ocean basins and spans multiple microbial phyla. While multiple microbially-mediated anaerobic pathways for Hg methylation are known, in the ocean, the majority of hgcA homologs have been found in oxic subsurface waters, in contrast to other ecosystems. In particular, microaerophilic Nitrospina, a genera of nitrite-oxidizing bacteria …

Stimulation Of Ammonia Oxidizer And Denitrifier Abundances By Nitrogen Loading: Poor Predictability For Increased Soil N2o Emission, Yong Zhang, Feng Zhang, Diego Abalos, Yiqi Luo, Dafeng Hui, Bruce A. Hungate, Pablo García-Palacios, Yakov Kuzyakov, Jørgen Eivind Olesen, Uffe Jørgensen, Ji Chen

Biology Faculty Research

Unprecedented nitrogen (N) inputs into terrestrial ecosystems have profoundly altered soil N cycling. Ammonia oxidizers and denitrifiers are the main producers of nitrous oxide (N₂O), but it remains unclear how ammonia oxidizer and denitrifier abundances will respond to N loading and whether their responses can predict N-induced changes in soil N₂O emission. By synthesizing 101 field studies worldwide, we showed that N loading significantly increased ammonia oxidizer abundance by 107% and denitrifier abundance by 45%. The increases in both ammonia oxidizer and denitrifier abundances were primarily explained by N loading form, and more specifically, organic N …

Legacy Effects Of Intercropping And Nitrogen Fertilization On Soil N Cycling, Nitrous Oxide Emissions, And The Soil Microbial Community In Tropical Maize Production, Lucas P. Canisares, Hanna J. Poffenbarger, Eoin L. Brodie, Patrick O. Sorensen, Ulas Karaoz, Daniel M. Villegas, Jacobo Arango, Letusa Momesso, Carlos Alexandre Costa Crusciol, Heitor Cantarella

Plant and Soil Sciences Faculty Publications

Maize-forage grasses intercropping systems have been increasingly adopted by farmers because of their capacity to recycle nutrients, provide mulch, and add C to soil. However, grasses have been shown to increase nitrous oxide (N₂O) emissions. Some tropical grasses cause biological nitrification inhibition (BNI) which could mitigate N₂O emissions in the maize cycle but the reactions of the N cycle and the microbial changes that explain the N₂O emissions are little known in such intercropping systems. With this in mind, we explored intercropping of forage grasses (Brachiaria brizantha and Brachiaria humidicola) with distinct …

Impacts Of Soil Management On Microbial Assemblages Involved In Nitrogen Transformations In Agroecosystems In Tennessee, Usa, Jialin Hu

Doctoral Dissertations

Nutrient reduction, particularly with respect to nitrogen (N) losses, is an important goal for sustainably managed agroecosystems. Soil N-cycling microbial populations that modulate these processes are affected by agricultural management regimes. This research focused on the controls and dynamics of the major N-cycling microbial populations in high-input cotton field under agricultural management regimes and low-input native C₄ forage grass systems under pasture management practices to determine the effects of management regimes on in situ seasonal dynamics of the functional microbes responsible for N fixation, nitrification, and denitrification processes. Molecular microbial ecology methods were combined with soil physicochemical properties and …

Development Of A Numerical Process Model For Adsorbent-Amended Constructed Wetlands, Lillian Mulligan

USF Tampa Graduate Theses and Dissertations

There is a need for alternative methods for municipal landfill leachate treatment as the high concentrations of pollutants in leachate interfere with processes at publicly owned treatment works (POTWs). Constructed wetlands (CWs) have been shown to be a sustainable alternative with good removal efficiencies for chemical oxygen demand (COD) and ammonia nitrogen (NH4+). The addition of an adsorbent media, such as zeolite and biochar, to CWs to further enhance removal efficiencies has been investigated in recent years. However, the long-term effects of zeolite and biochar addition to CWs is not well known. A model could be a useful tool to …

Chorine Conversion: Biological And Water Quality Impact On Activated Carbon Block Point Of Use Filters, Horace S. Jakpa

USF Tampa Graduate Theses and Dissertations

Point-of-use (POU) activated carbon (AC) filters are ubiquitous in many U.S. households. AC can reduce concentrations of lead, other heavy metals, and mitigate taste and odor issues. However, AC filters also remove residual disinfectants, thus allowing for the proliferation of microbes in the filter. In chloraminated systems, this can lead to localized, filter-induced nitrification. Most notably, high nitrite and nitrate in drinking water can cause methemoglobinemia (blue baby syndrome) in children under the age of three, raising public health concerns.

As a control measure for nitrification within distribution systems, utilities practice periodic, short-term secondary disinfectant switches from chloramine to free …

Evaluation Of Nutrient Solutions Produced From Aqueous Extracts And Decomposition Products Of Organic Waste Materials On The Plant Growth Performance In Hydroponics, Noura Said Al Nuaimi Said Al Nuaimi

Theses

Hydroponic plant production involves the cultivation of plants in absence of soil. In this system, the supply of the plant root with water and nutritional elements occurs via a nutrient solution made of inorganic salts. Hydroponic plant cultivation often achieves higher yields, water use efficiencies and quality of crops compared with soil production. In addition, it renders the farming system independent from soil properties. However, the currently available systems rely on the steady input of non-renewable inorganic salts. Unlike soil-based systems, hydroponics, so far, do not offer feasible opportunities for recycling nutritional elements from within crop residues or organic waste …

Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan

Student Research Symposium

Abstract: Nitrification is an important microbial two-step transformation in the global nitrogen cycle, as it is the only natural process that produces nitrate within a system. The functional annotation of nitrification-related enzymes has a broad range of applications in metagenomics, agriculture, industrial biotechnology, etc. The time and resources needed for determining the function of enzymes experimentally are restrictively costly. Therefore, an accurate genome-scale computational prediction of the nitrification-related enzymes has become much more important.In this study, we developed an alignment-free computational approach to determine the nitrification-related enzymes from the sequence itself. We propose deepNEC, a novel end-to-end feature selection and …

The Sorghum Bicolor Root Exudate Sorgoleone Shapes Bacterial Communities And Delays Network Formation, Peng Wang, Yen Ning Chai, Rebecca Roston, Franck E. Dayan, Daniel P. Schachtman

Center for Plant Science Innovation: Faculty and Staff Publications

Primary and secondary metabolites exuded from roots are key drivers of root-soil microbe interactions that contribute to the structure and function of microbial communities. Studies with model plants have begun to reveal the complex interactions between root exudates and soil microbes, but little is known about the influence of specialized exudates from crop plants. The aims of this work were to understand whether sorgoleone, a unique lipophilic secondary benzoquinone exuded only from the root hairs of sorghum, influences belowground microbial community structure in the field, to assess the effect of purified sorgoleone on the cultured bacteria from field soils, and …

Soil Health Management Enhances Microbial Nitrogen Cycling Capacity And Activity, Jianlin Hu, Virginia L. Jin, Julie Y.M. Konkel, Sean M. Schaeffer, Liesel G. Schneider, Jennifer M. Debruyn

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Soil microbial transformations of nitrogen (N) can be affected by soil health management practices. Here, we report in situ seasonal dynamics of the population size (gene copy abundances) and functional activity (transcript copy abundances) of five bacterial genes involved in soil N cycling (ammonia-oxidizing bacteria [AOB] amoA, nifH, nirK, nirS, and nosZ) in a long-term continuous cotton production system under different management practices (cover crops, tillage, and inorganic N fertilization). Hairy vetch (Vicia villosa Roth), a leguminous cover crop, most effectively promoted the expression of N cycle genes, which persisted after cover crop termination throughout the growing season. Moreover, we …

Internal Loading Of Nitrogen (N) And Phosphorus (P), Reduced N Forms, And Periodic Mixing Support Cyanobacterial Harmful Algal Blooms (Habs) In Shallow, Eutrophic Honeoye Lake (New York, Usa), Justin Adam Myers

Browse all Theses and Dissertations

Cyanobacteria are important primary producers, but large cyanobacterial harmful algal blooms (HABs) have many negative ecological and health impacts and are becoming increasingly common. Honeoye Lake (New York, USA) is a shallow, eutrophic lake characterized by increasingly frequent HABs. Nitrogen (N) and phosphorus (P) loads often drive HABs in lakes, and sediment processes can contribute to N removal (e.g., denitrification) or loading (e.g., N fixation, remineralization). Sediment cores and lake water were collected during May–October (2016–2018) at two sites and incubated with no amendments (controls) or 15N stable isotopes to measure sediment nutrient fluxes and N cycling dynamics in Honeoye …

Soil Microbial Nitrogen-Transforming Genes Influenced By Tree Species And Fertilization In An Appalachian Hardwood Forest, Emma G. Fox-Fogle

Graduate Theses, Dissertations, and Problem Reports

Many forest ecosystems have been receiving elevated nitrogen (N) deposition due to human activity. Increased ecosystem N threatens soil fertility, water and air quality, and modifies the soil microbially-mediated N cycle in complex ways. The current study investigates how the abundance of key functional N cycling genes within soil bacteria is altered by N deposition and further mediated by different dominant tree species at the Fernow Experimental Forest, WV. Soils were analyzed from two watersheds, where watershed 3 (WS 3) has been receiving experimental applications of N fertilizer that are 2x historic ambient N deposition and 5x the current ambient …

Dairy Manure Flushwater Treatment By Algae Raceway Ponds And Aerated Biofilm Reactors, Darin Son

Master's Theses

Nitrogen removal technologies can help dairy industries meet their nutrient management needs. This thesis investigated two separate treatment technologies for total ammonia nitrogen (TAN) removal: algae raceway ponds and aerated biofilm reactors. Six 1000- liter algae raceway ponds and four 1000-liter tote tanks, each equipped with 10 sheets of nonwoven geotextile (i.e., thermally bonded or needle-punched) biofilm substrate, were used to treat the effluent from a flush dairy in central coastal California (TAN = 251 mg/L, cBOD5 = 204 mg/L). For the algae raceway ponds (TAN loading rate = 7 - 35 g/m³-day among 7-, 10- and 14-day hydraulic residence …

Effect Of Plant Derived Tannins On Nitrogen And Carbon Cycling In Pasture Soils, Kathryn A. Slebodnik

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Pasture-finished beef has become increasingly popular, but nitrogen losses from these pastures are of concern. Legumes containing condensed tannins such as birdsfoot trefoil (Lotus corniculatus) and sainfoin (Onobrychis viciifolia) may serve as environmentally and economically viable alternative forages in pasture finishing systems while reducing soil nitrogen loss. The goal of this project was to understand how tannin type and concentration affects soil nitrogen cycling both in the lab and the field. This thesis: 1) compared the physical, chemical, and biological characteristics of soil samples obtained from grazed grass and tannin and non-tannin containing legume pastures, 2) …

Hurricane Disturbance Stimulated Nitrification And Altered Ammonia Oxidizer Community Structure In Lake Okeechobee And St. Lucie Estuary (Florida), Justyna J. Hampel, Mark J. Mccarthy, Sanni L. Aalto, Silvia E. Newell

Faculty Publications

© Copyright © 2020 Hampel, McCarthy, Aalto and Newell. Nitrification is an important biological link between oxidized and reduced forms of nitrogen (N). The efficiency of nitrification plays a key role in mitigating excess N in eutrophic systems, including those with cyanobacterial harmful algal blooms (cyanoHABs), since it can be closely coupled with denitrification and removal of excess N. Recent work suggests that competition for ammonium (NH₄⁺) between ammonia oxidizers and cyanoHABs can help determine microbial community structure. Nitrification rates and ammonia-oxidizing archaeal (AOA) and bacterial (AOB) community composition and gene abundances were quantified in Lake Okeechobee …

Nitrate Transport In The Unsaturated Zone, Patience Bosompemaa

Theses and Dissertations

Abundance of nitrate in the soil is a basic issue in agricultural land-use regions, causing eutrophication and pollution of water bodies. The study focuses on the role of a saturated buffer zone (SBZ) to remove nitrate from the groundwater resulting from agricultural activities. The study area is herbaceous SBZ located in central Illinois (40.614382ºN, -89.023542ºW), which lies between a stream and a farm located upgradient. The SBZ has been outfitted with an agricultural runoff treatment system that diverts tile drainage into the subsurface of the SBZ rather than discharging into the stream. Within the SBZ three experimental areas composed of …

Innovating Green Stormwater Infrastructure For Nutrient Management: Long-Term Field And Modeling Studies Of Conventional And Modified Denitrifying Bioretention Systems, Emma V. Lopez-Ponnada

USF Tampa Graduate Theses and Dissertations

Urban stormwater and nutrient management are increasingly important topics to address globally, as coastal urbanization increases, disturbing the natural landscape, hydrology, and water quality. Untreated urban stormwater runoff carries pollutants that enter our waterways, such as rivers and marine environments, which serve as drinking water sources, recreational sites, and locations for economic livelihood. One pollutant and nutrient of concern for water quality is reactive nitrogen (N). Since pre-industrial time, reactive nitrogen has doubled from human activity. When found in excess in waterways, nitrogen causes an overabundant growth of algae, which can result in eutrophic and hypoxic conditions, impacting ecosystems, human …

Biointerfacial Studies Of Nitrifying Biofilms On Physically And Chemically Modified Surfaces, Philip Marley Roveto

Civil Engineering ETDs

Interactions between bacteria and surfaces during the initiation of biofilm formation are complex phenomena with significant and wide-ranging implications for nutrient cycling, ecosystem and human health, and the remediation of anthropogenic pollutants. Nitrifying biofilms are currently used for ammonia removal in wastewater treatment plant (WWTP) systems. As well-studied biofilms, they can serve as models towards understanding crucial aspects of biofilm engineering. The overall objective of this research was to better understand how variations in specific surface chemistries and topographical features affect nitrification rates and microbial populations in an effort to develop technologies for improved productivity. The experimental approach was to …