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Ecological And Evolutionary Divergence Of A Shared Sympatric Color Polymorphism In Paracirrhites Hawkfish, Samuel Greaves

Graduate Studies Theses and Dissertations 2026

Color polymorphism provides a tractable window into how selection, gene flow, and ecology interact to maintain phenotypic diversity and initiate divergence. I investigate the ecological and genomic basis of sympatric light and melanistic morphs in two reef hawkfishes, Paracirrhites arcatus and P. hemistictus, across Guam and Hawai‘i. This study aims to determine whether the color morphs of these hawkfishes are a stable polymorphism or have begun the process of ecological speciation. For P. arcatus revealed substantially lower density on Guam (0.086 ind/m²) than reported for Hawai‘i (0.292 ind/m²) and a strong skew away from the melanistic morph on Guam …

Plants As Vectors For Environmental Prion Transmission, Christina M Carlson, Samuel Thomas, Matthew W Keating, Paulina Soto, Nicole M Gibbs, Haeyoon Chang, Jamie K Wiepz, Annabel G Austin, Jay R Schneider, Rodrigo Morales, Christopher J Johnson, Joel A Pedersen

Faculty, Staff and Student Publications

Prions cause fatal neurodegenerative diseases and exhibit remarkable durability, which engenders a wide array of potential exposure scenarios. In chronic wasting disease of deer, elk, moose, and reindeer and in scrapie of sheep and goats, prions are transmitted via environmental routes and the ability of plants to accumulate and subsequently transmit prions has been hypothesized, but not previously demonstrated. Here, we establish the ability of several crop and other plant species to take up prions via their roots and translocate them to above-ground tissues from various growth media including soils. We demonstrate that plants can accumulate prions in above-ground tissues …

Trophic Pathways And Their Relationship To Growth In Nearshore Consumers Across The Northern Gulf Of Alaska, Katherine M. Corliss

Marine Biology

Highly productive nearshore ecosystems in cold-temperate regions, such as the Northern Gulf of Alaska (NGOA), are supported by macroalgae and phytoplankton at the base of their food webs. Biomass of these primary producers varies seasonally, suggesting that longer-term environmental change could also shift biomass and/or range of basal producers. Our goal was to determine how proportional contributions of organic matter from macroalgae and phytoplankton to the diet of nearshore consumer species in the NGOA vary in space and time, and if these differences affect consumer growth. We used carbon and nitrogen stable isotope analysis to investigate diet sourcing of filter-feeding …

Engineering The Emergent Properties Of Complex Communities, Chang-Yu Chang

Yale Graduate School of Arts and Sciences Dissertations

Microorganisms perform critical functions throughout the biosphere and in biotechnology: from the biogeochemical cycle to the production of sourdough. The overwhelming majority of these functions are usually emergent from the collective outcomes of a large number of microorganisms living in a diverse community. Controlling and manipulating the functions of complex microbial communities is a major aspiration in modern biology. However, we lack a quantitative understanding of how often these functions are emergent, and when it occurs, how we can engineer the emergent properties of microbial communities. In this dissertation, I combine computational approaches with experiments using microbial communities to explore …

Ecology And Evolution, David J. Lohman

Open Educational Resources

Introduction to the basic principles of ecology and evolutionary biology emphasizing quantitative approaches and hypothesis testing. Scientific reasoning, computer literacy, and writing skills are developed in the laboratory.

Tropical Pitcher Plants (Nepenthes) Act As Ecological Filters By Altering Properties Of Their Fluid Microenvironments, Kadeem J. Gilbert, Leonora S. Bittleston, Wenfei Tong, Naomi E. Pierce

Biology Faculty Publications and Presentations

Characteristics of host species can alter how other, interacting species assemble into communities by acting as ecological filters. Pitchers of tropical pitcher plants (Nepenthes) host diverse communities of aquatic arthropods and microbes in nature. This plant genus exhibits considerable interspecific diversity in morphology and physiology; for example, different species can actively control the pH of their pitcher fluids and some species produce viscoelastic fluids. Our study investigated the extent to which Nepenthes species differentially regulate pitcher fluid traits under common garden conditions, and the effects that these trait differences had on their associated communities. Sixteen species of Nepenthes …

Emulated Ecology, Erik Graves

Bachelor of Architecture Theses - 5th Year

Natural versus built environment. Nature versus man made. Organic versus inorganic. These are arguments that have been stated and debated since the early architectural times of Vitruvius and are still prevalent even in today’s popular practice. As a whole architecture has moved towards a more green direction with the introduction of programs such as LEED and Architecture 2030. We have become more and more strict on the way we grade and evaluate the sustainability of a project, not just in the energy used and stored in the construction and operation of a building, but we have even begun to look …

Biology And Behavior Of The Asian Needle Ant, Brachyponera Chinensis , Hamilton Ross Allen

All Dissertations

Ants are among the most successful invasive organisms in the world. To curb the spread of invasive ants in non-native environments, their ecological, biological, and behavioral characteristics must be identified. The Asian needle ant, Brachyponera (= Pachycondyla ) chinensis (Emery) is an emerging invasive pest in urban areas and forests in the southeastern United States. However, general basic biological information on B. chinensis and subsequent management options are deficient. This work contributes to the standing biological information on B. chinensis by examining the seasonal life cycle, social nesting habits, and transport behaviors of B. chinensis colonies. To determine the seasonal …

The History Of Land Use On Alaska's Kenai River And Its Implications For Sustaining Salmon, Susan F. Loshbaugh

Natural Resources

The Kenai River Watershed (KRW), in south-central Alaska, is famous for its salmon. Urbanization along the lower river damages habitat and stresses these valuable fish. Are the river's salmon runs sustainable if recent land-use trends continue? I used interdisciplinary approaches from environmental history and landscape science plus technologies such as geographic information systems (GIS) to describe the watershed's land-use history from 1947 to 2010 and to link land use and watershed management to the sustainability of salmon runs. Although the area appears wild compared to many salmon-producing watersheds in other states, it has a long history of intense use and …

Chronic Toxicity Of Nano Metallics On Red Swamp Crayfish (Procambarus Clarkii) In Laboratory And Mesocosm Studies, Jake Andrew Farlow

LSU Master's Theses

Nanotechnology has become integrated in commercial, industrial and medical products, and its use has grown exponentially in the past several years. Although potential applications of nanoparticles (NPs) are numerous, concerns about their water quality, environmental, and human health impacts remain unclear. Crayfish are ubiquitous to streams and wetland habitats, are used as a food source, and inhabit areas that could be impacted by water quality issues. Numerous studies have been conducted on the toxicity of various classes of agricultural pesticides and oils to crayfish (Procambarus clarkii) as a non-target organism. However, there is little evidence published on chronic toxicity of …

Experimental And Theoretical Studies Of The Pollination Ecology Of Gynodioecy, James David Stone

Biological Sciences

Gynodioecy, a breeding system with females and hermaphrodites, is the most common dimorphic system in plants and found in more species than all other polymorphic systems combined. One unresolved question in gynodioecy evolution is how dramatic sex ratio variation (0-100% female) is maintained among populations. To address this gap, I used complementary empirical and theoretical approaches to ellucidate pollinators' role in the evolution and maintenance of gynodioecy and variation in gynodioecious sex ratios. I conducted two field studies restricting the types of pollinators available to artificial populations of Silene vulgaris. The first study contrasted pollination by pollen collectors, strongly favoring …

Ecology Of Glacial Relict Fishes In South Dakota's Sandhills Region, Eli Felts

Electronic Theses and Dissertations

Native stream fish zoogeography has changed substantially across North America during the last century as habitat degradation, stream fragmentation and introductions of nonnative species have led to numerous extinctions, extirpations and altered distributions. Insufficient information regarding imperiled species often results in reactive, rather than proactive, management, and knowledge of species status and ecology is critical in identifying conservation priorities. South Dakota populations of three dace species (northern redbelly dace Chrosomus eos, finescale dace Chrosomus neogaeus, and pearl dace Margariscus margarita) are relict of Pleistocene Glaciation and are isolated from the northern core of their distribution, but little information exists regarding …

A Survey Of The Ants (Hymenoptera: Formicidae) Of Arkansas And The Ozark Mountains, Joseph O'Neill

Horticulture Undergraduate Honors Theses

Ants are among the most abundant animals in most terrestrial ecosystems, yet local fauna are often poorly understood due to a lack of surveys. This study separated and identified ant species from arthropod samples obtained during ongoing projects by the lab of Dr. A.P.G. Dowling, Professor of Entomology at the University of Arkansas. More than 600 ants were prepared, 284 of which were identified to genus and 263 to species. From this collection, 33 species and one morphospecies were identified, comprising 18 genera in total. Additionally, 28 new distributional records were recorded for Benton, Madison, Newton, and Washington Counties in …

Traditional Knowledge And Fish Biology: A Study Of Bering Cisco In The Yukon River Delta, Alaska, David Michael Runfola

Fisheries

Relatively little is known about the biology of whitefishes (subfamily Coregoninae) in Alaska. To address this shortcoming, I combined social and biological science methods to examine whitefish in the Yukon River delta, Alaska. This study had two objectives: (1) to collaborate with Yup'ik subsistence fishers in sharing their knowledge of whitefish; and (2) to describe the life history of Bering cisco Coregonus laurettae. In August 2004, interview participants discussed Yup'ik traditional knowledge of whitefish. Participants shared knowledge of Bering cisco and other whitefish species. Interviews demonstrated the need for greater awareness of traditional knowledge, and the importance of communicating this …

Measurements Of Resistance And Reactance In Fish With The Use Of Bioelectrical Impedance Analysis: Sources Of Error, M. Cox, Ron Heintz, Kyle Hartman

Faculty & Staff Scholarship

New technologies can be riddled with unforeseen sources of error, jeopardizing the validity and application of their advancement. Bioelectrical impedance analysis (BIA) is a new technology in fisheries research that is capable of estimating proximate composition, condition, and energy content in fish quickly, cheaply, and (after calibration) without the need to sacrifice fish. Before BIA can be widely accepted in fisheries science, it is necessary to identify sources of error and determine a means to minimize potential errors with this analysis. We conducted controlled laboratory experiments to identify sources of errors within BIA measurements. We concluded that electrode needle location, …

Study Of Seasonal Influences On Algal Biodiversity In The River Yarqon (Central Israel) By Bio-Indication And Canonical Correspondence Analysis (Cca), Sophia Barinova, Moti Tavassi

Turkish Journal of Botany

In our research conducted in the River Yarqon during 2003-2006, we identified 313 taxa of algae and cyanobacteria belonging to 8 taxonomical divisions. Out of these 313 taxa, 268 taxa (85.6%) were indicators of environmental conditions that characterised the river water as alkaline with medium mineralisation. In the rainy and dry seasons the algal taxonomic compositions were very different, with prevailing diatoms in the winter and cyabobacteria and greens in summer. Bio-indication shows that the taxonomic preference for the self-purification process was more intensive during the rainy season, while the low level of river water in the dry season stressed …

Juvenile Crawfish (Procambarus Clarkii) Lc50 Mortality From South Louisiana Crude, Peanut And Mineral Oil, Okey Umejuru

LSU Master's Theses

Nearly every continent has species of crawfish that inhabit wetlands or are near coastal areas where petroleum and other oils are produced, transported, and accidentally released. Most crawfish cannot tolerate polluted water. Thus, they could serve as biomonitors of fossil fuel, biofuel, and other oil releases and assess potential negative impacts such oils have on wetland and coastal ecosystems. The objectives of this study were to estimate the acute toxicity of three oils to juvenile crawfish and determine if toxicity was due to poisoning or interference with oxygen transfer across the gills. Juvenile crawfish (Procambarus clarkii) were tested for acute …

Retrospective Analysis Of Marine Biological Data From Port Valdez, Alaska: A Case Study In Long -Term Monitoring, Arny L. Blanchard

Marine Biology

Efforts to understand anthropogenic effects within the Port Valdez study area provide a simple and adaptive model for developing and refining hypotheses to measure the structure of and detect, change in nearshore and benthic habitats. Drivers of change detected by this study are the 1964 Prince William Sound earthquake and the oil transportation and salmon aquaculture industries within the fjord. The study area is a glacial-outwash fjord characterized by strong seasonal and spatial environmental gradients due to glacial influences including seasonally low salinity, high suspended sediment loads, and subsequent high sedimentation rates. Direct and indirect effects from intolerance to low …

The Biology Of Canadian Weeds. 131. Polygonum Aviculare L., Mihai Costea, François J. Tardif

Biology Faculty Publications

A review and assessment of biological information as well as personal data are provided for Polygonum aviculare in Canada. The species has been revised taxonomically and the six subspecies that occur in Canada are presented. Three of the subspecies, P. aviculare subsp. aviculare, P. aviculare subsp. neglectum and P. aviculare subsp. depressum are weeds introduced to Canada from Europe. A fourth subspecies, P. aviculare subsp. buxiforme is apparently native to North America. The geographical distribution of the latter four subspecies is very wide. Plants exhibit a high phenotypic plasticity and genetic variability, and they easily adapt to a multitude …

The Taxonomic And Systematic Relationships Of Several Salt Marsh Fucus Taxa (Heterokontophyta, Phaeophyceae) Within The Gulf Of Maine And Ireland Examined Using Microsatellite Markers, Aaron L. Wallace

Doctoral Dissertations

The present thesis utilizes microsatellite markers to examine genetic affinities between several salt marsh Fucus ecads in order to ascertain their relationships with attached parental species. Chapter I provides an introduction to the genus Fucus and discusses morphological plasticity, systematic difficulties, and studies of hybridization between different Fucus species.

Chapter II describes my development of microsatellite markers for Fucus. Four polymorphic microsatellite loci were used to determine the origin of a dwarf muscoides-like Fucus from the Brave Boat Harbor (ME) salt marsh. Similar forms were originally described in Europe, and appear to be derived from F. vesiculosus L. However, my …

Ecology Of The Rock Shrimp Sicyonia Dorsalis Kingsley, 1878 (Crustacea: Sicyoniidae) In A Subtropical Region Of Brazil, Rogerio Caetano Da Costa, Adilson Fransozo, Maria Lucia Negreiros-Fransozo

Gulf and Caribbean Research

The present study analyzes the abundance and distribution of the rock shrimp Sicyonia dorsalis, in relation to water temperature, salinity, depth, organic matter content, and sediment texture in Mar Virado (MV), Ubatuba (UBA) and Ubatumirim (UBM), 3 distinct bays along the northern coast of São Paulo State (23°S, 45°W), Brazil. Six transects were taken in each bay, 4 being parallel to the coastline and 2 next to the rocky shores. Monthly samples were taken over a 2-year period (1998 and 1999) with a shrimp fishing boat equipped with double-rig nets. A total of 2,498 specimens was obtained with 804 …

Phylogeny Of The Characeae (Charophyta) And Biogeography Of Chara (Characeae) Inferred From Ribosomal Rna Genes., Susan T. Meiers

LSU Historical Dissertations and Theses

This dissertation examined generic, subsection, and infraspecific aspects of the phylogeny of the Characeae, and biogeography of Chara subsections and Chara haitensis. These relationships were inferred from cladistic and maximum likelihood analyses of sequence data for 18S and ITS regions of nuclear-encoded ribosomal RNA genes. Morphologically-based phylogenetic hypotheses of Wood and Imahori (1965) and Khan and Sarma (1984) concerning the six extant members of Characeae were tested. The analyses supported: monophyly of family Characeae, tribe Chareae, and of Lamprothamnium; placement of Nitellopsis basal to tribe Chareae; and an unresolved relationship between Lamprothamnium and Chara. Neither the hypothesis of Wood and …

Introduction: One Hundred Years Of Natural History In Turkmenistan, Victor Fet

Biological Sciences Faculty Research

As part of the famous “Great Game” between the Russian and British Empires in Central Asia, Turkmenistan was the last colonial prize of the Russian tsars; its delineation from Afghanistan was completed only in the 1890s. The Russian Empire’s Transcaspian Region (Zakaspiiskaya Oblast) was roughly what Turkmenistan is today; its neighbors were the semi-independent emirate of Bokhara to the east and khanate of Khiva to the north, both remnants of medieval Muslim empires.

This book combines the results of basic scientific research in biogeography and ecology; its purpose is to give a fairly comprehensive account of the nature of Turkmenistan. …

The Cladocera Of Lake West Okoboji, Iowa - Revisited, Kenneth L. Lang

Journal of the Iowa Academy of Science: JIAS

Seven stations, established in 1968 to sample Cladocera, were sampled again, using the same methods, in 1988. Seven species, all of them in low abundance, are new records for Lake West Okoboji. In 1988, there was little difference 1) in the ranking of the stations relative to abundance of cladocerans, 2) the distribution and abundance of the species by habitat-type, 3) the seasonality of the predominant species in the specific habitats, 4) the temporal patterns of the number of species and total cladoceran abundance in the specific habitats, compared to 1968. On the average there were more species but lower …

A Bibliography Of Varietal Resistance To The Rice Gall Midge, Orseolia Oryzae (Wood-Mason), P. K. Pathak, E. A. Heinrichs

Department of Entomology: Faculty Publications

This bibliography contains 330 published and unpublished references for the period 1881-1981. References are arranged alphabetically by author and are also classified by country and by subjects (mass rearing, screening, evaluation and utilization of resistant varieties, breeding for and inheritance of resistance, and biotype variation). Tables list resistant varieties identified, varietal sources used in breeding programs, varieties which have been released for cultivation by farmers and biotype classification.

The Life Cycle And Ecology Of Octospiniferoides Chandleri Bullock 1957 (Acanthocephala)., David Joseph Demont

LSU Historical Dissertations and Theses

No abstract provided.