Digital Commons Network^™

Enso-Induced Oceanographic Anomalies And Their Potential Impacts On Coral Species In The Phoenix Islands Protected Area, Jason T. Gonsalves

Master's Theses

The 2015/16 El Niño event is one of the strongest El Niño Southern Oscillation (ENSO) events on record. Coral reefs in the Phoenix Islands Protected Area (PIPA) were exposed to the effects of the 2015/16 El Niño event and experienced moderate to severe coral bleaching and mortality. This study examines the variability in three key oceanographic variables before, during, and after the 2015/16 El Niño event within PIPA: sea surface temperature (SST), sea surface salinity (SSS), and estimated chlorophyll-a (chl-a) as a proxy for regional productivity. I used remote sensing data for SST, SSS, and estimated chl-a coupled with in-situ …

Distribution Modeling Predicts Pacific Newt (Genus Taricha) Road Mortality Near Remote Lakes In Santa Clara County, California, Anna Petrosky

Master's Theses

The California newt (Taricha torosa) is listed as a State Species of Special Concern across its southern range due to habitat degradation and loss, and limited studies indicate it may be experiencing these threats in its northern range as well. This project assesses where the California newt may be encountering roads as migration barriers and experiencing high mortality in western Santa Clara County, California, in an effort to inform future conservation efforts. I conducted surveys of California newt roadkill on roads bordering two reservoirs used as breeding habitat and accessed roadkill data collected by the Lexington Reservoir Newt Patrol. Roadkill …

Baseline Nutrition Knowledge And Feasibility Of A Whatsapp-Delivered Nutrition Education Intervention Among California Wildland-Urban Interface Firefighters, Lauren E. Anderson

Master's Theses

Wildland firefighters perform physically demanding work under challenging environmental conditions that place substantial demands on nutritional health and occupational performance. Despite the importance of nutrition in supporting physical performance, recovery, and long-term health, limited research has examined nutrition knowledge and dietary behaviors among California wildland firefighters or evaluated the feasibility of remotely delivered nutrition education interventions within this occupational population. Therefore, the purpose of this pilot study was to assess baseline nutrition knowledge, nutrition self-efficacy, and dietary behaviors while evaluating the feasibility of a 12-week WhatsApp-delivered nutrition education intervention among California wildland firefighters.

Twenty-four firefighters completed the baseline assessment and …

A Genetic Analysis Of The Rare Endemic Astragalus Ripleyi Barneby, Juan Antonio Jaramillo-Chico

Master's Theses

Astragalus ripleyi Barneby is a rare endemic species found in the San Luis Valley of the southern portions of the Rocky Mountains in Colorado and New Mexico. Though not federally listed as endangered, the species is on the Bureau of Land Management’s Sensitive Species List, warranting protection and continued management. This study aims to provide information about the genetic health of the species to inform conservation efforts and provide updated management recommendations. A genetic health analysis was conducted investigating the levels of diversity present in the species, how genetic diversity is structured across the known range of the species and …

Fish Meal Serum Modulates Mitochondrial Membrane Potential In Steroidogenic Cells: Implications For Luteoprotection In Cattle, Tyra Marie Goodluck

Master's Theses

The bovine corpus luteum (CL) is a transient endocrine gland that forms after ovulation and produces progesterone, a hormone crucial for early pregnancy. The cattle industry faces tremendous losses annually due to early embryonic mortality within the first 100 days of gestation, where approximately 16% occur during a critical timeframe known as the maternal recognition of pregnancy (MRP). In a normal estrous cycle, if no viable embryo is present, the uterus secretes prostaglandin F2α (PGF2α) during the late luteal phase, triggering luteal regression. One key action of PGF2α is reducing luteal blood flow, leading to hypoxia. This hypoxic state induces …

The Acute Effect Of A Single Dose Of Berberine On Blood Glucose Response Following A Standardized Meal And 2-Mile Walk Performance In Healthy Adults, Victor Emmanuel Obaro

Master's Theses

It is clear that exercise improves overall health status, and it is possible that berberine (BR) may work through some similar mechanisms to improve health status as well.  Purpose: The purpose of this study was to explore the acute effects of a single dose of BR on health status following a standardized meal and a 2 mile walk treadmill protocol with outcomes including blood glucose (BG), blood pressure (BP), heart rate (HR), rate of perceived exertion (RPE), and a two-mile walk time trial performance. Methods: This study used a cross-over design where 14 healthy, young adults were given berberine (BBR) …

Multidimensional Determinants Of Gait, Balance, And Softball Performance In Female Youth: Biomechanics, Resource Access, And Psychosocial Factors, Allie G. Mcauliffe

Master's Theses

Movement quality is a fundamental indicator of healthy childhood development and supports physical, emotional, psychosocial, and cognitive well-being. Movement quality is influenced by multiple biomechanical, environmental, and psychosocial factors, yet the relationships among them remain poorly understood in underrepresented populations such as female youth, particularly in softball. Previous studies have largely examined biomechanics, resource access, and psychosocial experience independently, and few have investigated how these factors interact in female youth softball players. To address this gap, this study compared gait and balance characteristics between softball (N = 34) and non-softball (N = 7) female youth, examined associations between resource access, …

Id-More Vision: Real-Data Machine-Learning Assessment For A Digital-Twin-Inspired, Xr-Ready Rehabilitation Prototype, Rickey L. Clark

Master's Theses

Rehabilitation assessment often relies on periodic observation, while many XR prototypes show scripted rather than recorded-motion evidence. iD-MORE Vision is an offline pipeline trained on KIMORE and IRDS and linked through JSON packets to a two-mode Unity desktop prototype. Both datasets include controls and rehabilitation participants with neurologic, musculoskeletal, or mobility impairments. This improves relevance but does not clinically validate the system.

Under fixed subject-wise splits, the primary five-seed Random Forest predicted KIMORE clinician scores with MAE 6.087 ± 0.044 cTS and R² 0.568 ± 0.006; the subject-level R² interval crossed zero. The primary IRDS five-run CUDA GRU averaged 0.877 …

A Comparison Of Survival, Growth, And Stress Resilience In Three Different Lineages Of The Pacific Oyster (Crassostrea Gigas) Farmed On The California Central Coast, Victoria F. Hanshaw

Master's Theses

Aquaculture of Pacific oysters on the US West Coast is routinely impacted by seasonal unexplained mortality events. To better understand these large-scale mortality events in oyster aquaculture, shellfish growers and scientists in California have partnered together to conduct comparative, multi-estuary farm trials of discrete Pacific oyster (Crassostrea gigas) lineages. In this thesis we investigate how the more recently imported Midori lineage performs compared to the historically used Miyagi lineage, as well as a Hybrid (Midori x Miyagi) lineage. As part of a 7-month long field study from April-November of 2024 in Morro Bay and Tomales Bay, California, we evaluated …

Hardware-In-The-Loop Evaluation Of Sensor-Source Selection For Prosthetic Locomotion Intent Recognition, Victoria Asencio-Clemens

Master's Theses

Active lower-limb prostheses use intent-recognition systems to identify a user’s locomotion mode and select an appropriate control strategy, but sensor configurations that perform well offline may be unsuitable for resource-constrained embedded hardware. Existing sensor-selection methods generally prioritize classification accuracy without directly accounting for processing latency, memory usage, or other hardware-dependent requirements. To address this limitation, this thesis develops a hardware-in-the-loop source-selection framework for embedded classification of level walking, ramp ascent, ramp descent, stair ascent, and stair descent using multimodal biomechanical data from transtibial amputee participants. Subject-specific linear support vector machine classifiers were evaluated using trial-held-out validation, and candidate configurations from …

Development And Evaluation Of Alternative Mandrel Materials For The Fabrication Of In-House Silicone Vascular Models, Cole Capitani

Master's Theses

Dr. Kristen Cardinal’s Tissue Engineering Laboratory at California Polytechnic State University, San Luis Obispo develops tissue-engineered blood vessel mimics (BVMs) for preclinical testing of neurovascular devices. These BVMs are reliant on silicone vascular models that define the vessel geometry, support endothelial cell attachment, and allow devices to be evaluated in a controlled in vitro environment. Previous work in the lab established injection molding as a viable method for fabricating silicone vascular models and utilized acrylonitrile butadiene styrene (ABS) for sacrificial mandrels. However, this workflow relied on the use of acetone for mandrel dissolution, required single-use mandrels, had extended post-processing times, …

Comparing Online Versus In-Person Administration Of Cognitive Tasks And Evaluating Their Predictive Utility Of Inattention Symptoms And Related Behaviors, Cameron Pothoven

Master's Theses

Attention-Deficit/Hyperactivity Disorder (ADHD) is a neurodevelopmental disorder associated with less developed working memory (WM) processes, theorized to be a core contributing factor in the development of ADHD and a predictor of ADHD symptom severity (Alderson et al., 2013; Rapport et al., 2008). Objective measures inclusive of working memory tasks, when used in conjunction with self-report measures, have been previously shown to increase the accuracy of diagnosing ADHD (Marshal et al., 2021. However, given that WM is typically assessed by a trained clinician, it is unclear how accurate and comparable online administration of adapted WM tasks are to their in-person counterparts. …

Blue Crab Reproductive Output And Phenology In A Changing Climate, Blaise Rohan

Master's Theses

Globally, ecosystems are experiencing rising temperatures due to climate change, with potential consequences for reproductive investment and timing in many species. Blue crabs, Callinectes sapidus, support valuable commercial fisheries throughout the U.S. Atlantic and Gulf coasts, and understanding variation in reproductive output has important management and conservation implications. This study examined two components of blue crab reproduction: (1) reproductive investment across populations spanning multiple latitudes (New York, New Jersey, North Carolina, Mississippi, and Texas), using a space-for-time substitution to assess the effects of varying thermal regimes on fecundity and egg quality, and (2) spawning phenology in North Carolina from …

Impacts Of Agricultural Microplastics On The Growth Of Marine Phytoplankton In Monterey Bay, Olivia A. Pawlyk

Master's Theses

Agricultural plastics are an emerging source of microplastics (MPs) to coastal marine environments, yet their effects on marine phytoplankton remain poorly understood. In coastal regions surrounding Monterey Bay (California, USA), plastic mulch used in agriculture can fragment into MPs during weathering and removal, entering marine waters via runoff and wind transport. This study investigated the effects of environmentally relevant concentrations of agricultural MPs on the growth and physiology of four marine phytoplankton species: two harmful algal bloom (HAB) taxa (Alexandrium sp. and Pseudo-nitzschia multiseries) and two non-HAB taxa (Thalassiosira sp. and Prorocentrum sp.). Each species was cultured independently and exposed …

Impacts Of Physical Extremes On The Reproductive Output And Dispersal Of Stephanocystis Osmundacea, Jessica J. Franks

Master's Theses

Population replenishment is vital for species survival and depends on reproductive output and recruitment success. Many marine organisms rely on both short- and long-distance dispersal to sustain and expand their populations. Marine dispersal involves microscopic or planktonic stages that are influenced by currents, physical processes, and biological traits such as planktonic duration and sinking behavior. Depth and light gradients affect primary producer growth, impacting reproduction, especially in morphologically plastic seaweeds. This study examined how depth-related factors influence reproductive morphology, reproductive output, and dispersal of the subtidal brown seaweed Stephanocystis osmundacea in central California. Using field, lab, and computational methods, depth-driven …

A Socio-Ecological Study Of Coyote And Human Interactions In San Francisco Bay Open Space Preserves, Zhiyi Zhou

Master's Theses

Urban open space preserves support both intensive recreation and wildlife, but the information on carnivore activity and visitor perceptions is limited. This study combined camera-trap monitoring and on-site visitor surveys to evaluate activity patterns of medium- to large-bodied mammals and perceptions of coyotes at Windy Hill and Rancho San Antonio Open Space Preserves (South San Francisco Bay Area). From October 2024 to July 2025, thirteen cameras recorded 213,681 photo events; detections were standardized as detections per 1,000 camera-hours. Ten mammal species and two avian species were detected, including four focal carnivores: coyote (Canis latrans), bobcat (Lynx rufus), mountain lion (Puma …

Health Literacy, Health Information Seeking Behavior, And Vocal Hygiene Amongst Video Game Voice Actors In The United States, Wendy Lau

Master's Theses

Video game voice actors (VGVAs) perform vocally demanding tasks to bring video game characters to life, and are at high risk for voice disorders. This exploratory study aims to characterize vocal health in VGVAs by investigating the relationships between health literacy, health information seeking behavior, and vocal hygiene practices. Thirty-one VGVAs completed an anonymous online survey. Data were analyzed using a mixed-methods approach: quantitative health literacy scores were calculated, and qualitative data underwent inductive thematic analysis in NVivo. Results show that VGVAs are highly proactive with their vocal health due to their desire for career longevity and their professional vocal …

“Being An Arab Is Like Fighting For Your Joy”: Exploring Bicultural Identity, Racialization, And Psychological Well-Being Among Us-Born Arab Americans, Hisham Nsier

Master's Theses

Bicultural identity development in Arab Americans, who must manage sometimes conflicting cultural expectations, is understudied. Even less is known about Arab Americans born in the United States (US-born AA), who are American by birth yet are alienated from society due to differences between their ‘white’ racialization and their cultural identities. The current study aimed to examine the relationship between bicultural identity, racialization, and psychological well-being at the intersection of US-born AA’s co-existing identities. Eight adult US-born AAs (Mage = 28 years, SD = 4) were recruited from professional Listservs and WhatsApp affinity groups. Qualitative semi-structured interviews were conducted and analyzed …

Counting Your Chickens Before They Hatch: Understanding Anticipatory Savoring And How And Why People Approach Or Avoid The Anticipation Of Future Positive Events, Asura Louise Osborne

Master's Theses

In this study, discretion between the styles used to anticipate positive events is the focus of a Confirmatory Factor Analysis (CFA) conducted on the Index of Anticipatory Styles (IAS). The IAS is a 45-item survey used to measure types of savoring in response to future positive events. This work expands the savoring literature to examine approach- and avoidant-type anticipatory savoring. Approach-type anticipatory savoring discriminates between Enjoyment, Coping, Control, Recalled Anticipation, and Downplaying. Avoidant-type savoring parses between Avoidance of anticipation because events may not occur, Avoidance of anticipation because events may fail to live up to expectations, Jinxing, and Counterproductivity. CFA …

City Farm Slo: A Case Study Of Nonprofit Regenerative Agriculture, Carver Tunnell

Master's Theses

The focus of this thesis is to create a case study on City Farm SLO, a nonprofit based in San Luis Obispo, California, that has engaged in education and regenerative agriculture on City owned land since 2013. This case study is intended for use in undergraduate agribusiness and natural resource management courses, to encourage thoughtful discussion surrounding nonprofit and regenerative agricultural systems. The case presents the nonprofit at a time of relative success, having recently secured a lease renewal, extending stewardship 40 years into the future. However, the reliance on grants and donations threatens the security of the operation going …

Trim-Transfer: A Transfer Learning Approach For Cross-Trim Level Can Intrusion Detection, Baylor J. Whitehead

Master's Theses

Modern vehicles contain many Electronic Control Units (ECUs) that communicate through CAN. While CAN enables efficient data communication, it lacks built in authentication and encryption, allowing adversarial actors to inject malicious CAN messages. This limitation has motivated the development of CAN intrusion detection systems (IDS). However, deploying IDS across a vehicle lineup requires collecting large labeled datasets and retraining models, increasing development cost and limiting scalability.

This thesis investigates the use of transfer learning with LSTM-based deep neural networks to reduce retraining cost while maintaining model detection performance. A baseline LSTM model is trained using CAN data from a base …

Exploring Regenerative Vegetable Systems On The Central Coast Of California, Una S. O'Connell

Master's Theses

As climate change and current agricultural practices place pressure on the long term sustainability and resilience of food production systems, there is growing interest in whether existing agricultural systems can adapt to maintain productivity while improving environmental outcomes.

This study evaluated the effects of regenerative versus standard organic vegetable production systems on yield, insect communities, and weed suppression across three field trials conducted on California's Central Coast. In addition, I collected baseline soil health data for all trials. Trials 1 and 2 were carried out at the Cal Poly San Luis Obispo Organic Farm using cabbage and broccoli as cash …

Developing A Humpback Whale Vocalization Detector Using Machine Learning Models, Lucas Kantorowski

Master's Theses

Humpback whale songs are notoriously complex. Identification of humpback whale song units requires bioacousticians to tediously listen, analyze, and annotate collected sound data. Even sparse data requires listening to the entirety of the collected acoustic data. In this study, three hours of audio containing over one-thousand humpback whale song units was collected in Monterey Bay, California.

Prior studies have seen success using convolutional neural networks by performing image classification on hundreds of hours worth of spectrograms. Our study uses traditional machine learning models, as they are less computationally demanding, and require less data.

We use time splitting and Mel-frequency cepstrum …

Movement And Space Use Of Weaned Northern Elephant Seal (Mirounga Angustirostris) Pups During Their First At-Sea Foraging Migration, Katie Saenger

Master's Theses

The northern elephant seal (Mirounga angustirostris) is a marine mammal known for engaging in long foraging migrations at sea. Adult male northern elephant seals follow pathways along the western coast of North America towards Alaska and adult female northern elephant seals follow pathways to open ocean in the North Pacific. However, there is little information on weaned northern elephant seal pup foraging behavior during their first foraging migration. This lack of knowledge is significant because northern elephant seals have a mortality rate of >50% in the first year. This project aimed to better understand the at-sea migratory movement …

Evaluation Of Alternative Solvents For Electrospinning Occluded Scaffolds To Model Intracranial Atherosclerotic Disease In Blood Vessel Mimics, Olivia D. Rankin

Master's Theses

Intracranial atherosclerotic disease (ICAD) is characterized by a buildup of fatty plaque within the walls of arteries supplying the brain, resulting in vessel narrowing, restricted blood flow, and increased risk of ischemic stroke. While various treatments exist for ICAD, most are accompanied by high recurrent stroke rates and other adverse events, highlighting the need for further investigation and models for pre-clinical testing. Tissue engineered Blood Vessel Mimics (BVMs), consisting of a polymer scaffold sodded with human vascular cells, serve as physiologically relevant in vitro models for vascular device testing. This thesis focused on the application of alternative solvents to a …

Xylem: A Comparative Analysis Of Gpu Dispatch Pipelines For Large-Scale, Procedural Environments, Srinivas Sundararaman

Master's Theses

The real-time rendering of large-scale, procedural scenes presents a significant performance challenge for traditional CPU-bound rendering pipelines. The high volume of draw calls and the need for complex culling and level-of-detail management create bottlenecks that limit scene complexity and visual fidelity. This thesis investigates the evolution of GPU-driven rendering paradigms via the Xylem renderer within NVIDIA’s Donut rendering framework as a solution to these challenges.

A comprehensive benchmarking framework is developed to implement and quantitatively analyze three distinct rendering strategies for a procedurally generated, parameterizable, large-scale forest scene. The evaluated pipelines include: (1) traditional instanced rendering, (2) compute-driven indirect rendering …

Integration Of Robotic Arm And Conveyor With Programmable Logic Controller, Drake A. Small

Master's Theses

To meet new curriculum demands brought on by Cal Poly's upcoming switch to semesters, a new, cross-disciplinary lab module was developed for EE 435 (Industrial Power Control and Automation). The module emphasizes career-applicable skills, preparing students for the field of controls engineering within the manufacturing industry. These skills include robotic control, computer networking and configuration, and embedded systems. The work focused on integrating a collaborative robot arm to pick-and-place boxes on a conveyor. A myCobot 320 Pi and an Ultimation Powered Roller MDR Conveyor were integrated with the existing PLC system using Modbus RTU and EtherNet/IP communication protocols, respectively. A …

A History Of The Underground Comix Scene: The Seriousness Of An Unserious Genre, Harris Darcie Shugart

Master's Theses

The Underground Comix Scene of the 1960s and 1970s was born out of an age of censorship. The Comics Code Authority, a regulatory body created by the Comics Magazine Association of America in 1954, established guidelines requiring publishing houses to self-regulate following a recommendation from the United States Senate Subcommittee on Juvenile Delinquency in 1953. Comix with an X, for their X-rated nature, represent an emerging counter-culture in the latter half of the 1960s and the 1970s, with an epicenter of San Francisco. These comix and their artists were not interested in obtaining the looming ‘Seal of Approval’ from the …

Evaluation Of Laser Doppler Flowmetry And Transillumination Laser Speckle Contrast Imaging To Measure Blood Flow Change In Ischemia Mouse Hindlimb Models, Simon Park

Master's Theses

Peripheral Artery Disease (PAD), caused by plaque buildup and narrowing of the arteries, reduces blood flow to the extremities. Promoting collateral arteriogenesis can help redirect blood flow. However, simple growth of collaterals may not be enough to reverse PAD. Instead, the ability for the collaterals to vasodilate and control blood flow is important, meaning assessing collateral function is important for the arteriogenesis assesment. Although microscopy techniques can measure vasodilation, contrast limitations in larger vessels such as collaterals make blood flow measurements difficult. Techniques such as ultrasound or magnetic resonance imaging (MRI) can measure blood flow but have limitations with cost …

Computational Modeling To Evaluate Bipolar Flexible Electrode Designs For Use In Sciatic Nerve Stimulation, Krystyna S. Allman

Master's Theses

Peripheral nerve stimulation is clinically used to manage pain, rehabilitate motor function, and promote nerve regeneration. The sciatic nerve is often studied for stimulation due to its accessibility and clinical relevance. A conventional nerve cuff electrode is the least invasive method for nerve stimulation, but the mismatch of mechanical properties of the electrode with the nerve tissue can cause damage to the nerve and the electrode itself. This study investigated a novel bipolar, gold nanowire-based cuff electrode design and its ability to selectively activate fibers in the rat sciatic nerve at varying interelectrode spacings. In COMSOL, A finite element model …