Digital Commons Network^™

The Impact Of Sample Processing And Media Chemistry On The Culturable Diversity Of Bacteria Isolated From A Cave, Katey E. Bender, Katelyn Glover, Alexander Archey, Hazel A. Barton

International Journal of Speleology

Although molecular approaches can identify members of microbial communities in the environment, genomic information does not necessarily correlate with environmental phenotype. Understanding functional roles can be done by cultivating representative species, yet the culturablility of bacteria from caves remains low, at 0.02%, limiting our understanding of microbial community interactions and processes. We have investigated several factors influencing culturability of bacteria from a single sample location in Maxwelton Sink Cave, WV, USA. Extended incubation of inoculated plates showed a significant increase in colony counts from two to four weeks, indicating that extended incubations increase culturability. There were no significant differences in …

Culture-Based Analysis Of ‘Cave Silver’ Biofilms On Rocks In The Former Homestake Mine In South Dakota, Usa, Amanpreet K. Brar, David Bergmann

International Journal of Speleology

Tunnels in a warm, humid area of the 1478 m level of the Sanford Underground Research Facility (SURF), located in a former gold mine in South Dakota, USA, host irregular, thin whitish, iridescent biofilms, which appear superficially similar to ‘cave silver’ biofilms described from limestone and lava tube caves, despite the higher rock temperature (32°C) and differing rock surface (phyllite) present at SURF. In this study, we investigated the diversity of cultivable bacteria constituting the cave silver by using several media: CN agar, CN gellan gum and 0.1X R2A agar. The highest colony count (CFU/g of sample) was observed on …

Diversity Of Cultured Bacteria From The Perennial Ice Block Of Scarisoara Ice Cave, Romania, Corina Iţcuş, Mădălina-Denisa Pascu, Traian Brad, Aurel Perşoiu, Cristina Purcarea

International Journal of Speleology

Cave ice ecosystems represent a poorly investigated glacial environment. Diversity of cave ice bacteria and their distribution in perennial ice deposits of this underground glacial habitat could constitute a proxy for microbial response to climatic and environmental changes. Scarisoara Ice Cave (Romania) hosts one of the oldest and largest cave ice blocks worldwide. Here we report on cultured microbial diversity of recent, 400, and 900 years-old perennial ice from this cave, representing the first characterization of a chronological distribution of cave-ice bacteria. Total cell density measured by SYBR Green I epifluorescence microscopy varied in the 2.4 x 10⁴ – …

Airborne Microorganisms In Lascaux Cave (France), Pedro M Martin-Sanchez, Valme Jurado, Estefania Porca, Fabiola Bastian, Delphine Lacanette, Claude Alabouvette, Cesareo Saiz-Jimenez

International Journal of Speleology

Lascaux Cave in France contains valuable Palaeolithic paintings. The importance of the paintings, one of the finest examples of European rock art paintings, was recognized shortly after their discovery in 1940. In the 60’s of the past century the cave received a huge number of visitors and suffered a microbial crisis due to the impact of massive tourism and the previous adaptation works carried out to facilitate visits. In 1963, the cave was closed due to the damage produced by visitors’ breath, lighting and algal growth on the paintings. In 2001, an outbreak of the fungus Fusarium solani covered the …

Diversity Of Cultivable Bacteria Involved In The Formation Of Macroscopic Microbial Colonies (Cave Silver) On The Walls Of A Cave In Slovenia, Blagajana Herzog Velikonja, Rok Tkavc, Lejla Pašić

International Journal of Speleology

Karstic caves often support white, yellow, grey or pink microbial colonies that are termed ‘cave silver’ by speleologists. Using various sample pre-treatments and culture media, a wide variety of bacteria associated with these colonies were recovered from a cave in Slovenia, Pajsarjeva jama. Decreasing the inoculum size resulted in significant increases in viable counts, while pre-treatments had the opposite effect with the exception of microwave irradiation. While all growth media yielded viable counts, the maximal counts were observed on a low-nutrient TWA medium.

Based on the 16S rRNA gene sequence of OTU representatives, the majority of the 80 isolates examined …

Comparative Microbial Sampling From Eutrophic Caves In Slovenia And Slovakia Using Rida ®Count Test Kits, Janez Mulec, Václav Krištůfek, Alica Chroňáková

International Journal of Speleology

RIDA®COUNT test plates were used as an easy-to-handle and rapid indicator of microbial counts in karst ecosystems of several caves in Slovakia and Slovenia. All of the caves had a high organic input from water streams, tourists, roosting bat colonies or terrestrial surroundings. We sampled swabs, water and air samples to test robustness and universality of the RIDA®COUNT test kit (R-Biopharm AG, Germany, http://www.r-biopharm.com/) for quantification of total bacteria, coliforms, yeast and mold. Using data from swabs (colony-forming units per cm²) we proposed a scale for description of biocontamination level or superficial microbial load of cave niches. Based …

A New Foodweb Based On Microbes In Calcitic Caves: The Cansiliella (Beetles) Case In Northern Italy, Maurizio G. Paoletti, Mattia Beggio, Angelo Leandro Dreon, Alberto Pamio, Tiziano Gomiero, Mauro Brilli, Luca Dorigo, Giuseppe Concheri, Andrea Squartini, Annette Summers Engel

International Journal of Speleology

The troglobitic beetle, Cansiliella servadeii percolating water on moonmilk, a speleothem formation in Grotta della Foos, Italy. Results from analyses of stable isotopes of carbon and nitrogen suggest that acquires and assimilates dissolved allochthonous organic carbon, inorganic nitrogen, and possibly phosphorus and other nutrients from the microbial fauna associated with moonmilk.

Pathogenic And Opportunistic Microorganisms In Caves, Valme Jurado, Leonila Laiz, Veronica Rodriguez-Nava, Patrick Boiron, Bernardo Hermosin, Sergio Sanchez-Moral, Cesareo Saiz-Jimenez

International Journal of Speleology

With today’s leisure tourism, the frequency of visits to many caves makes it necessary to know about possible potentially pathogenic microorganisms in caves, determine their reservoirs, and inform the public about the consequences of such visits. Our data reveal that caves could be a potential danger to visitors because of the presence of opportunistic microorganisms, whose existence and possible development in humans is currently unknown.

Ultraviolet Radiation Sensitivity In Cave Bacteria: Evidence Of Adaptation To The Subsurface?, Jessica R. Snider, Caitlin Goin, Robert V. Miller, Penelope J. Boston, Diana E. Northup

International Journal of Speleology

We hypothesize that a reduced capacity to withstand or repair cellular damage from ultraviolet radiation may be present in cave-adapted microorganisms that never experience such conditions. However, a small number of previous studies have shown that some subsurface bacteria do not show greater sensitivity to ultraviolet radiation (UVR) than surface bacteria. To estimate UVR sensitivity in cave bacteria, bacterial isolates were collected from Carlsbad Cavern, New Mexico, U.S.A., and percent survival following exposure to various UVC and UVA radiation doses was determined. Cave bacteria from Left Hand Tunnel in Carlsbad Cavern and surface bacteria from soil and rocks above Carlsbad …

Lights And Shadows On The Conservation Of A Rock Art Cave: The Case Of Lascaux Cave, Fabiola Bastian, Claude Alabouvette

International Journal of Speleology

Lascaux Cave was discovered in 1940. Twenty years after the first microbial contamination signs appeared. In the last forty years the cave suffered different fungal invasions. Here we discuss the past, present and future of the cave and the conservation of its rock art paintings to the light of data obtained using culture-dependent and –independent methods.

Deposition Of Calcium Carbonate In Karst Caves: Role Of Bacteria In Stiffe's Cave, Claudia Ercole, Paola Cacchio, Giorgio Cappuccio, Aldo Lepidi

International Journal of Speleology

Bacteria make a significant contribution to the accumulation of carbonate in severa! natural habitats where large amounts of carbonates are deposited. However, the role played by microbial communities in speleothem formation (stalactites, stalagmites etc.) in caves is still unclear. In bacteria carbonate is formed by autotrophic pathways, which deplete CO₂ from the environment, and by heterotrophic pathways, leading to active or passive precipitation. We isolated cultivable heterotrophic microbial strains, able to induce CaCO₃ precipitation in vitro, from samples taken from speleothems in the galleries of Stiffe’s cave, L’Aquila, Italy. We found a large number of bacteria in the …