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Analysis Of 3d Cone-Beam Ct Image Reconstruction Performance On A Fpga, Devin Held

Electronic Thesis and Dissertation Repository

Efficient and accurate tomographic image reconstruction has been an intensive topic of research due to the increasing everyday usage in areas such as radiology, biology, and materials science. Computed tomography (CT) scans are used to analyze internal structures through capture of x-ray images. Cone-beam CT scans project a cone-shaped x-ray to capture 2D image data from a single focal point, rotating around the object. CT scans are prone to multiple artifacts, including motion blur, streaks, and pixel irregularities, therefore must be run through image reconstruction software to reduce visual artifacts. The most common algorithm used is the Feldkamp, Davis, and …

Creating Functional Materials With Phosphorus, Tyler John Cuthbert

Electronic Thesis and Dissertation Repository

Understanding the relationship between small molecules or polymers and how they affect the properties of materials they compose is the basis of materials science. Using unique and versatile components can impart useful and interesting properties to materials. Here, we aimed to extend this understanding to phosphorus, and the known properties it possesses. This included the production of photopolymerizable coatings containing phosphonium molecules and polymers for antifouling and antibacterial applications. The synthesis and characterization of these phosphonium components was completed and materials were produced utilizing UV curing technology. Addition of these components produced coatings that could resist bacteria attachment and efficiently …

Static Magnetic Field Interactions Of Medical Devices In The Mri Environment, Spencer Baird Parent

Electronic Thesis and Dissertation Repository

Background: The current procedures and guidelines for testing medical devices require that conservative testing be carried-out using the “worst-case” device or device configuration for each interaction (force, torque, heating, et cetera) of importance, and the results of those tests be used to inform regulatory labeling for that device. One of the most difficult elements of carrying out the above procedure is the determination of what represents a “worst-case” device or device configuration. A simulation “pipeline” would enable a systematic procedure for identification of the worst-case device or device configuration for magnetic force from an otherwise impossibly large set of options. …

Control Of Matrix Metalloproteinases In A Periodontitis Model: Molecules That Trigger Or Inhibit Mmp Production, Catalina Matias Orozco

Theses and Dissertations

In periodontitis, there is a disruption in the homeostasis of the oral microbiome by peridontopathogenic bacteria. However, while bacteria is essential for periodontitis to occur, the severity, pattern and progression of the disease is not solely determined by the microbial burden, and in fact has a lot to do with the overwhelming host inflammatory response. The response can vary even in two individuals with similar periodontopathogenic profiles. The host response leads to extracellular matrix (ECM) destruction, loss of attachment, alveolar bone resorption and eventually, edentulism. The host's reaction is orchestrated by proinflammatory cytokines and chemokines and matrix metalloproteinases (MMPs). MMPs …

Gastrointestinal Health As A Stimulus For Native American Attraction To Medicinal Asteraceae And Further Implications For Human Evolution, Christopher David Stiegler

Graduate Theses and Dissertations

The Asteraceae, or the daisy family, is the largest family of flowering plants in the world, and its ethnobotanical, medical, and economic value is readily apparent cross-culturally. The aim of this thesis is to examine why constituent genera of the Aster family have remained such an integral part of human medicinal plant knowledge, and thereby to reveal any potential physiological, biological, or evolutionary mechanisms underlining human patterns of use regarding the Asteraceae. The present study focuses specifically on Native American plant knowledge made available by the expansive database in the works Daniel Moerman (Moerman 2003). Frequencies of plant use and …

Giant Beaver (Castoroides) Palaeoecology Inferred From Stable Isotopes, Tessa Plint

Electronic Thesis and Dissertation Repository

Stable isotope analysis was used to explore unresolved questions about the palaeoecology of the extinct Pleistocene giant beaver (Castoroides). The δ¹³C, δ¹⁵N, and δ¹⁸O of bone collagen and structural carbonate from enamel served as proxies for palaeodiet and palaeoclimate. A new baseline for freshwater and terrestrial plant δ¹³C and δ¹⁵N was utilized in a mixing model (SIAR) to assess rodent feeding niche. SIAR analysis indicated that Castoroides’ consumed a diet of predominantly macrophytes, making them reliant on wetland habitat for food. Based on isotopic data for potential …

Students' Reasoning With Haptic Technologies: A Qualitative Study In The Electromagnetism Domain, Sadhana Balachandran

Open Access Theses

With abundant applications in the medical training and entertainment industry, haptic technology is slowly making its way into the realm of science education, particularly in conveying abstract and non-visible concepts. Electric field is one such abstract concept. Past studies have shown that learning concepts such as electric fields in a traditional classroom can be quite challenging since students have a hard time visualizing the phenomena and applying its effects to reason. Furthermore, these concepts are the building blocks for more complex concepts such as matter and molecular interactions. Visuo-haptic devices provide a great platform to enable students to visualize and …

An Evaluation Of Paleomagnetic Techniques To Determine Emplacement Temperatures Of Pyroclastic Density Currents At Mount St. Helens, Devin Gerzich

Theses and Dissertations

During a volcanic eruption, pyroclastic density currents (PDCs) deposit new pumice and ash and rip out and transport lithic fragments from past eruptions. Magnetic minerals in the lithic fragments, such as titanomagnetite, may be partially or completely remagnetized, depending on their emplacement temperature with respect to their Curie and blocking temperatures. By finding the temperature at which this remagnetized overprint is removed, the emplacement temperature of the pyroclastic flow is estimated. This method assumes that the rock magnetic properties that govern magnetic unblocking are constant given a specific magnetic mineral composition, but recent studies demonstrate that Curie temperatures (Tc) in …

Silver-Polymer Nanocomposites, Anita N. Paul

Electronic Theses and Dissertations

The objective of this research was the development of an efficient method for the preparation of silver-polymer nanocomposites containing finely dispersed silver nanoparticles. The surface of nanosilver was functionalized by thiolation with 2-aminoethanethiol. Amino-modified nanosilver was covalently bonded to polyacrylic acid, biodegradable polymers like acid terminated polylactic acid, ester terminated poly(DL-lactide-co-glycolide) and acid terminated poly(DL lactide-co-glycolide) in the presence of diisopropylcarbodiimide by carbodiimide method. Esterification of the carboxyl groups of Ag-polyacrylic acid by hydrochloric acid in methanol resulted in the formation of a stable colloidal dispersion of Ag nanoparticles in the polymer matrix. It was observed that not just acid …

Can Skeletal Morphology Support New Molecular Phylogenies Of Antedonidae (Crinoidea: Comatulida)?, Brenna Hays

HCNSO Student Theses and Dissertations

Antedonidae (Crinoidea: Comatulida) is the largest of extant crinoid families; it currently includes ~155 accepted species in 50 genera and accounts for ~23% of extant crinoid species (~29% of feather stars) and 27% of genera. Molecular phylogenies have returned the family as polyphyletic, with several clades scattered among non-antedonid sister groups (Hemery 2011, Hemery et al. 2013, Rouse et al. in prep.). Traditional morphological characteristics are thus inadequate for reconstructing relationships among taxa. SEM imaging was used in an effort to discover new diagnostic features that will support the molecular data, focusing on skeletal ossicles within the calyx, specifically the …

Analysis Off Dependent Discrete Choices Using Gaussian Copula, Arjun Poddar

Mathematics & Statistics Theses & Dissertations

A popular tool for analyzing product choices of consumers is the well-known conditional logit discrete choice model. Originally publicized by McFadden (1974), this model assumes that the random components of the underlying latent utility functions of the consumers follow independent Gumbel distributions. However, in practice the independence assumption may be violated and a more reasonable model should account for the dependence of the utilities. In this dissertation we use the Gaussian copula with compound symmetric and autoregressive of order one correlation matrices to construct a general multivariate model for the joint distribution of the utilities. The induced correlations on the …

Dental Microwear Variation In Teleoceras Fossiger (Rhinocerotidae) From The Miocene (Hemphillian) Of Kansas, With Consideration Of Masticatory Processes And Enamel Microstructure, Kelsie Abrams

Master's Theses

Dental microwear analysis is the study of microscopic features on the surfaces of teeth, and is used to reconstruct and analyze diet in extinct and extant animals. Microwear analysis on ungulates is typically conducted on the paracone or protoconid of the second molar, as these cusps are usually the first point of contact between upper and lower teeth during the chewing stroke. However, the exact method of mastication varies in different groups of ungulates, and the influence of mastication on the location and production of microwear features has been studied very little. Additionally, the role of highly specialized enamel microstructure …

Taphonomy Of A Lance Formation(Maastrichtian, Wy) Dinosaur Bonebed With A Focus On Tooth Traces, Matthew A. Mclain

Loma Linda University Electronic Theses, Dissertations & Projects

The Rose Quarry bonebed found in the Maastrichtian Lance Formation of eastern Wyoming possesses a complex blendof taphonomic signatures. Disarticulated, disassociated, fragmented bones of various states of abrasion from dinosaurs, turtles, and crocodilians are clustered together in a channelized sandstone unit. The mismatched taphonomic signatures of the bonebed suggest that it is amixed assemblage, containing bones with different taphonomic histories that were washed together by a flood event. Sedimentological data,includingthe presence of large mud clasts in the bonebed,agree well with this hypothesis. The abundant breakage of the bones in the Rose Quarry bonebed is attributed mainly to trampling. This study …

Measuring Accuracy Of Two 3d Printing Materials, Mudassir Ali

Master of Technology Management Plan II Graduate Projects

Part accuracy is one of the important aspect in the manufacturing industry. The overall inaccuracy of the parts being built by RP technology has been one of the major challenges that need to be overcome. Though all the printing materials come with specifications, but the suppliers and manufactures does not specify the accuracy of the materials. In this study we established a study which compares the accuracy of the materials in consideration and performed an experiment to establish the superiority of a material in terms of accuracy over each other. The purpose of this project was to compare the dimensional …

Investigation Of Lung Structure-Function Relationships Using Hyperpolarized Noble Gases, Robert P. Thomen

Arts & Sciences Electronic Theses and Dissertations

Magnetic Resonance Imaging (MRI) is an application of the nuclear magnetic resonance (NMR) phenomenon to non-invasively generate 3D tomographic images. MRI is an emerging modality for the lung, but it suffers from low sensitivity due to inherent low tissue density and short T₂*. Hyperpolarization is a process by which the nuclear contribution to NMR signal is greatly enhanced to more than 100,000 times that of samples in thermal equilibrium. The noble gases ³He and ¹²⁹Xe are most often hyperpolarized by transfer of light angular momentum through the electron of a vaporized alkali metal to the noble …

The Stratigraphic Position Of Fossil Vertebrates From The Pojoaque Member Of The Tesuque Formation (Middle Miocene, Late Barstovian) Near Española, New Mexico, Garrett R. Williamson

Electronic Theses and Dissertations

The stratigraphy of the Pojoaque Member of the Tesuque Formation near Española, NM is not well understood. This region, during the Middle Miocene, represented a dynamic alluvial fan-fluvial-lacustrine environment within the Española Basin while the Rio Grande Rift was active. Cavazza (1986) identified two paleodrainage systems (lithosome A, basin-margin facies and B, basin-floor facies) by means of sandstone and conglomerate petrology, paleocurrent, and sedimentary facies analyses. After x-ray diffraction analyses of claystones within lithosome B, mordenite was discovered, which is a zeolite mineral commonly found within volcanic rocks. This is significant because the presence of mordenite confirms Cavazza’s (1986) conclusion …

Population Projection And Habitat Preference Modeling Of The Endangered James Spinymussel (Pleurobema Collina), Marisa Draper

Senior Honors Projects, 2010-2019

The James Spinymussel (Pleurobema collina) is an endangered mussel species at the top of Virginia’s conservation list. The James Spinymussel plays a critical role in the environment by filtering and cleaning stream water while providing shelter and food for macroinvertebrates; however, conservation efforts are complicated by the mussels’ burrowing behavior, camouflage, and complex life cycle. The goals of the research conducted were to estimate detection probabilities that could be used to predict species presence and facilitate field work, and to track individually marked mussels to test for habitat preferences. Using existing literature and mark-recapture field data, these goals were accomplished …

Description, Taphonomy, And Paleoecology Of The Late Pleistocene Peccaries (Artiodactyla: Tayassuidae) From Bat Cave, Pulaski County, Missouri, Aaron L. Woodruff

Electronic Theses and Dissertations

The late Pleistocene faunal assemblage from Bat Cave, central Ozarks, Missouri provides an opportunity to assess specific aspects of behavior, ecology, and ontogeny of the extinct peccary Platygonus compressus. All identifiable elements referable to this taxon were catalogued and examined, and a minimum number of individuals of 70 was determined for the sample. The presence of distinct, non-overlapping age groups suggests that P. compressus utilized Bat Cave on a seasonal basis. A predator-prey relationship with Canis dirus, the second most abundant vertebrate from the Bat Cave site, is also described in this study. Damage patterns suggest that the …

Dietary Effects On The Stoichiometry Of Growth, Regulation, And Wastes Of Ozark Stream Insect Detritivores, Halvor Matthew Halvorson

Graduate Theses and Dissertations

A widespread stressor, anthropogenic nitrogen (N) and phosphorus (P) pollution can increase resource nutrient content and alter animal community composition in freshwater ecosystems. In this dissertation, I used ecological stoichiometry theory to examine effects of diet nutrient content and leaf litter type on growth, regulation, and wastes of aquatic invertebrate detritivores. I tested effects of leaf litter diet carbon:phosphorus (C:P) on growth and stoichiometric regulation of the detritivorous caddisfly Pycnopsyche lepida and used results to determine a threshold elemental ratio of oak litter C:P=1620 that confers peak growth of this species. This empirical, growth-based approach provided a more accurate estimate …

Surface And Interfacial Design And Control Of High Performing Thermoplastics: Polysulfones And Beyond, Katrina Marie Knauer

Dissertations

The study of a class of materials almost always begins with the development of an understanding of properties in the bulk state. However, it is the study of surface critical phenomena that has led to a number of new important insights into polymer behavior. A systematic understanding of physical properties in the immediate vicinity of surface and interfacial layers, which cannot be deduced by simple extrapolation of bulk properties, is of significant importance for advancements in polymer applications where the interface drives performance, such as in membranes, coatings, drug-delivery systems, medical devices, and composites.

First, the surface and interfacial modification …

Improving And Understanding Inter-Filament Bonding In 3d-Printed Polymers, Madeline S. Stark

Chancellor’s Honors Program Projects

No abstract provided.

Peccaries (Artiodactyla: Tayassuidae) From The Late Miocene To Early Pliocene Gray Fossil Site: Regional Implications With A Review Of Tayassuinae, Evan M. Doughty

Electronic Theses and Dissertations

Analysis of the Gray Fossil Site peccary material indicates the presence of up to three species. Comparisons with the tayassuid material known from the Tyner Farm and Bone Valley Formation of Florida allows the identification of Mylohyus elmorei and at the GFS. Within the GFS material, Prosthennops cf. P. serus and cf. Catagonus sp. are also tentatively recognized but further verification is required. The known range for Prosthennops is expanded into the Appalachian region. Presence of M. elmorei at the Gray Fossil Site provides the first known occurrence of this species outside of the Palmetto fauna of Florida, indicating that …

Inference For A Zero-Inflated Conway-Maxwell-Poisson Regression For Clustered Count Data., Hyoyoung Choo-Wosoba

Electronic Theses and Dissertations

This dissertation is directed toward developing a statistical methodology with applications of the Conway-Maxwell-Poisson (CMP) distribution (Conway, R. W., and Maxwell, W. L., 1962) to count data. The count data for this dissertation exhibit three different characteristics: clustering, zero inflation, and dispersion. Clustering suggests that observations within clusters are correlated, and the zero inflation phenomenon occurs when the data exhibit excessive zero counts. Dispersion implies that the mean is greater/smaller than the variance unlike a Poisson distribution. The dissertation starts with an introduction of inference for a zero-inflated clustered count data in the first chapter. Then, it presents novel methodologies …

A Log Rank Test For Clustered Data Under Informative Within-Cluster Group Size., Mary Elizabeth Gregg

Electronic Theses and Dissertations

The log rank test is a popular nonparametric test for comparing the marginal survival distribution of two groups. When data are organized within clusters and the size of clusters or the distribution of group membership within a cluster is related to an outcome of interest, traditional methods of data analysis can be biased. In this thesis, we develop a within-cluster group weighted log rank test to compare marginal survival time distributions between groups from clustered data, correcting for cluster size and intra-cluster group size informativeness. The performance of this new test is compared with the unweighted and cluster-weighted log rank …

Integrated Analysis Of Mirna/Mrna Expression And Gene Methylation Using Sparse Canonical Correlation Analysis., Dake Yang

Electronic Theses and Dissertations

MicroRNAs (miRNAs) are a large number of small endogenous non-coding RNA molecules (18-25 nucleotides in length) which regulate expression of genes post-transcriptionally. While a variety of algorithms exist for determining the targets of miRNAs, they are generally based on sequence information and frequently produce lists consisting of thousands of genes. Canonical correlation analysis (CCA) is a multivariate statistical method that can be used to find linear relationships between two data sets, and here we apply CCA to find the linear combination of differentially expressed miRNAs and their corresponding target genes having maximal negative correlation. Due to the high dimensionality, sparse …

Some Contributions To Nonparametric And Semiparametric Inference For Clustered And Multistate Data., Sandipan Dutta

Electronic Theses and Dissertations

This dissertation is composed of research projects that involve methods which can be broadly classified as either nonparametric or semiparametric. Chapter 1 provides an introduction of the problems addressed in these projects, a brief review of the related works that have done so far, and an outline of the methods developed in this dissertation. Chapter 2 describes in details the first project which aims at developing a rank-sum test for clustered data where an outcome from group in a cluster is associated with the number of observations belonging to that group in that cluster. Chapter 3 proposes the use of …

Least-Squares Mapping From Kinematic Data To Acoustic Synthesis Parameters For Rehabilitative Acoustic Learning, Xiangyu Zhou

Master's Theses (2009 -)

Thousands of people suffer from dysarthria resulting from neurological injury of the motor component of the motor-speech system, and need to rely on alternative methods to communicate in daily life, such as body language or text-to-speech [1] . However, there are currently very few effective rehabilitative therapies for helping these patients improve their speech. Because of this, research is needed to develop better rehabilitative therapies. One such area of research is the use of involuntary acoustic learning. The Speech and Swallowing lab at Marquette University has an Electromagnetic Articulography (EMA) system to collect kinematic data and a software system called …

Tunable Controlled Release Of Molecular Species From Halloysite Nanotubes, Divya Narayan Elumalai

Doctoral Dissertations

Encouraged by potential applications in rust coatings, self-healing composites, selective delivery of drugs, and catalysis, the transport of molecular species through Halloysite nanotubes (HNTs), specifically the storage and controlled release of these molecules, has attracted strong interest in recent years. HNTs are a naturally occurring biocompatible nanomaterial that are abundantly and readily available. They are alumosilicate based tubular clay nanotubes with an inner lumen of 15 nm and a length of 600-900 nm. The size of the inner lumen of HNTs may be adjusted by etching. The lumen can be loaded with functional agents like antioxidants, anticorrosion agents, flame-retardant agents, …

Novel Techniques In Chemical Ecology To Examine Life Histories In Fishes, Orian Tzadik

USF Tampa Graduate Theses and Dissertations

Diet and movements in fishes are often logistically challenging to study. Trace element and stable isotope analyses have advanced these fields considerably, but are still constrained by methodological impediments, such as the tendency towards lethal sampling. Studying endangered fishes is particularly challenging as representative samples are difficult to obtain. However, the information gained from such studies is often critical to the recovery of endangered fishes as knowledge of life history attributes has the potential to greatly influence the success of management strategies.

I tested the viability of using fin rays in fishes as a non-lethal approach to study diet and …

Inference On Time-To-Event Distribution From Retrospective Data With Imperfect Recall., Sedigheh Salehabadi Dr.

Doctoral Theses

Time-to-event data arises from measurements of time till the occurrence of an event of interest. Such data are common in the fields of biology, epidemiology, pub- lic health, medical research, economics and industry. The event of interest can be the death of a human being (Klein and Moeschberger, 2003), failure of a machine (Zhiguo et al., 2007), onset of menarche in adolescent and young adult females (Bergsten-Brucefors, 1976; Chumlea et al., 2003; Mirzaei, Sengupta and Das, 2015), onset (or relapse) of a disease (Klein and Moeschberger, 2003), dental develop- ment (Demirjian, Goldstien and Tanner, 1973; Eveleth and Tanner, 1990), breast …