Digital Commons Network^™

Satellites, Urban Heat, And Environmental Justice: Community As The Bridge Between Analysis And Action, Joshua B. Fisher, Ambar Rivera, Ava Cison, Ashley Agatep, Kainani Tacazon, Sophia Spiegleman, Alison Mckenery, Rio E. Fisher, Reginald Archer, Jason A. Douglas

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Heat waves are increasing in frequency, intensity, magnitude, and duration, causing a disproportionate impact on marginalized communities exposed to urban heat islands. Newly emerging spaceborne thermal sensing instruments, such as ECOSTRESS and Hydrosat, now have the capabilities to measure urban surface temperatures accurately at the block level (< 100 m) and with enough frequency to capture transient heat waves (daily to subweekly). Such data are critical for monitoring and informing policy and mitigation efforts, such as resurfacing, green space, cooling stations, and medical mobilization. These serve to advance environmental justice and reduce health risks—and deaths—among the most vulnerable: minority, low-income, elderly, those with physical- and mental-health preconditions, unhoused, children, and outdoor workers. While scientists have increasingly used satellite data to quantify urban heat islands and risks to communities, there remains a significant gap in action resulting from such analyses—a figurative and literal “valley of death.” Reviewing over 500 scientific publications, we identify a critical lack of engagement with the communities being analyzed (10.9%; n = 58); yet, community engagement is key to bridging such analysis with subsequent action. Here, we demonstrate how participatory community engagement directly with data and analysis leads to increased policy changes and mitigation efforts. Our framework has immediate implications for how scientists may augment their work and thought processes to achieve …

Environmental Monitoring In Shallow Lakes: Public Health Threats In Urban Waters, Kyleigh E. Johnson

Theses and Dissertations

Lakes are an integral part of urban and suburban communities, providing ecological, recreational, and public health benefits. Many of these lakes are located in densely populated areas and are subject to urban influences on water quality. Algal toxins and Escherichia coli are two common recreational concerns. Algal toxins come from harmful algal blooms that are influenced by nutrient availability and temperature, while bacteria are often introduced through run-off and animal waste. Sampling every 3-4 weeks from May-October 2025 allowed for the assessment of seasonal patterns and site-specific differences across nine lakes in the Richmond area. The highest bacterial concentrations appeared …

Indigenizing Aquaculture: In Pursuit Of An Integrated Multi-Trophic Aquaculture System For Enhanced Self-Sufficiency In Akaroa Harbour, Aotearoa New Zealand, Cali R. Trainor

Capstone Collection

This study assessed the feasibility of integrating two pre-existing aquaculture activities in Akaroa Harbour, Aotearoa New Zealand into an integrated multi-trophic aquaculture (IMTA) system. The cultivation of giant kelp (Macrocystis pyrifera) presents an opportunity to improve the sustainability of Chinook salmon (Oncorhynchus tshawytscha) farming by introducing alternative food sources for salmon, which can be used to produce fish feed locally, enhancing the self-sufficiency of the community and boosting the holistic efficiency of the system. Macroinvertebrates residing in giant kelp wrack were collected, identified, and quantified to determine if any of the Macrocystis-associated specimens could serve as …

Emerging Policies On Marine Biodiversity Beyond National Jurisdiction Governance, Jessie Neta Jeffrey

World Maritime University Dissertations

No abstract provided.

Using Triple Oxygen Isotopes To Investigate Water Usage In Desert Ecosystems, Cloe V. Knutson

Earth and Planetary Sciences ETDs

In arid environments, maintaining water balance can be more critical for survival than obtaining food. As droughts intensify, understanding how animals manage body water is essential. Triple oxygen isotope analysis provides a novel way to trace water sources in animals, distinguishing contributions from free water, food-derived oxygen, and atmospheric O₂. We developed an equilibration method using CO₂–H₂O oxygen exchange and measured δ^’18O and Δ^’17O values via tunable infrared laser direct spectroscopy (TILDAS). Validated against traditional fluorination methods, this technique enables streamlined analysis of whole blood and plant samples. Applied to …

Metabarcoding-Biomass Relationships And Internal Standards For Quantitative Dna Metabarcoding, Frances Webber

Open Access Master's Theses

DNA metabarcoding has been widely adopted due to its power in investigating the composition of protistan communities, accurately identifying even small and cryptic taxa. However, the compositional nature of DNA metabarcoding results, and the distortion of natural abundances due to variation of the often-used 18S rRNA gene copy number over several orders of magnitude, renders these results semi-quantitative at best, limiting the application of DNA metabarcoding to ecological study. Here, we constructed mock communities from uni-algal cultures of taxonomically diverse phytoplankton and conducted metabarcoding using multiple primer sets and both DNA and cDNA as PCR templates. For each culture, chlorophyll …

Pygoscelis Penguins Prefer Different Oceanographic And Terrestrial Habitats During The Austral Summer, Katherine L. Gallagher, Rachel Herman, Katherine Walton, Michael S. Dinniman, Heather J. Lynch

OES Faculty Publications

Pygoscelis penguins interact with both terrestrial and marine environments, especially during the austral summer when they raise their chicks. Accessible ice-free ground spaces serve as locations for penguins to build colonies and successfully raise chicks while the surrounding marine environment serves as the foraging grounds for adult birds. Penguins must be able to navigate through the waters around their colonies to forage for Antarctic krill (Euphausia superba), their primary prey during the austral summer. Krill, whose distributions are driven partially by the surrounding physics and partially by their behaviors, must also be plentiful in the waters near the …

Investigating The Effectiveness Of Best Management Practices In Reducing Fecal Bacteria In Narrow River, Rhode Island, Katherine Thompson

Open Access Master's Theses

Fecal bacterial contamination shapes how communities manage and use estuarine waters, with consequences for ecosystem health and public access. In Rhode Island's Narrow River, elevated concentrations of fecal coliforms and enterococci have restricted shellfishing for decades despite ongoing management efforts. From 2004 to 2018, local organizations implemented Best Management Practices (BMPs) to address water quality challenges, yet their effectiveness remains incompletely understood. This study analyzes three decades of monitoring data using linear regression, generalized additive models, and Before After Control Impact methods to evaluate BMP effectiveness and identify key drivers of contamination. Linear regression revealed spatially variable trends, with bacterial …

A Paradigm For Ecological Dynamics In Predator-Prey Systems: Applications To Climate Change, Grayson D. Adams, Aditi Ghosh Dr.

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Sargassum In The Florida Keys: Assessment Using High Resolution Remote Sensing, Sarah “Sully” Sullivan

USF Tampa Graduate Theses and Dissertations

Pelagic Sargassum in the Atlantic Ocean, one type of floating macroalgae, has increased in biomass and extent since 2011, bringing environmental, health, and economic issues to coastal communities. The introduction of large quantities of Sargassum to the Florida Keys, a tourism hub renowned for coral reef and marine diversity, poses a potentially devastating threat. Currently, Sargassum mats are widely monitored using medium resolution satellite imagery such as those collected by the Moderate Resolution Imaging Spectroradiometer (MODIS, 1km) and spectral band difference algorithms such as the Alternative Floating Algae Index (AFAI), but the resulting maps lack the detail and nearshore certainty …

Consequences Of The Megafauna Extinction: Changes In Food Web Networks On The Edwards Plateau Across The Pleistocene–Holocene Transition, Quentin A. Smith Jr.

School of Biological Sciences: Dissertations, Theses, and Student Research

We are experiencing biodiversity loss due to climate change and human impacts, which is not only harmful to the environment but can also alter the composition of communities and interactions among species. The late Pleistocene experienced a loss of large-bodied mammals which resulted in significant changes in community structure due to changes in body size, diet, and species associations. The impact of these changes on species interactions and community structure across the Pleistocene-Holocene transition remains poorly understood. Using a robust data set of species composition, stable isotopes, body size, and climate variables, we constructed and compared ecological networks of mammal …

Quantification Of Belowground Biomass And Sediment Accretion In Mangroves Of Different Coastal Environmental Settings Of The Costa Rican Pacific Coast, Denise M. Poveda

LSU Master's Theses

The adaptation of intertidal ecosystems such as mangroves to anticipated accelerated relative sea level rise is dependent on net increase of sediment surface elevations and forest migration inland. Ecosystem models developed to simulate trajectories of ecosystem adaptations have determined that rates of soil formation are most sensitive to surface sediment (organic and inorganic) deposition and subsurface organic production by mangrove roots. Mangrove belowground biomass contributes to soil organic matter accumulation, while mangrove litter has minor contribution due to export and annual decay. In addition to belowground biomass production, inorganic sediment loading is also key contribution to soil formation and accretion. …

The Role Of Geomorphological Context In Vegetative Succession Within The Breiðamerkurjökull Glacial Foreland, Lucas Nerbonne

Independent Study Project (ISP) Collection

As glaciers retreat worldwide at an accelerating pace, understanding primary succession in these newly exposed landscapes becomes increasingly critical. This study examines the initial vegetative colonization patterns in glacial forelands, focusing on the influence of geomorphological formations of resulting plant communities. By analyzing vegetative communities in glaciofluvial and push moraine deposits, this study highlights how the more varied, channelized morphologies of fluvial deposits create potential microclimates better conducive to heterogenous plant colonization than the homogenous terrain of the nearby push moraine. Vegetative coverage, sediment size, and species abundance was collected at 480 sites across 6 different historical glacial extents across …

State Of Coastal And Marine Resources: Sablayan, Occidental Mindoro, Ma Celina J. Añonuevo, Jemelyn Grace P. Baldisimo, Denmark B. Racamara, Mary Joyce P. Velos, Joseph Benedict T. Garcia, Frederico B. Sabban, Joey P. Cabasan, Rhea Mae Luciano, Darryl Anthony Valiño, Lovely Joy Heyres, Hazel O. Arceo

Biological Sciences Faculty Publications

[Introduction] Sablayan, situated on the western side of Mindoro Island facing the WPS (12.8564° N, 120.9101° E), is a first-class municipality in the province of Occidental Mindoro with a total land area of 2,188.8km² that is divided into 22 barangays, nine of which are along the coast. The coastline stretches for 115 km, with municipal waters covering approximately 750,000 km² (LGU-Sablayan 2008).

The Apo Reef Natural Park, one of its most prominent features, is located approximately 33 km off the coast (Figure 2.9-1) The Apo Reef Natural Park is a protected coral reef system under presidential proclamation 868 (1996) encompassing …

State Of Coastal And Marine Resources: Lian, Batangas, Joseph Benedict T. Garcia, Mary Joyce P. Velos, Jemelyn Grace P. Baldisimo, Joey P. Cabasan, Ma Celina J. Añonuevo, Denmark B. Recamara, Hazel O. Arceo

Biological Sciences Faculty Publications

[Introduction] Lian (13.9852° N, 120.6545° E) is a third-class municipality in the northwestern part of the province of Batangas. It is bounded on the north by the municipality of Nasugbu, on the east by the municipalities of Tuy and Balayan, on the west by the WPS, and on the south by the municipality of Catatagan (Figure 2.7-1). It has a total land area of 76.80km² that is divided into 19 barangays, six of which are coastal and two are integrated coastal barangays (LGU-Lian 2013). Its total population is 56,280 individuals in 15,991 households as of 2020 (PSA 2020).

The main …

Fun Azores: A Functional Trait Database For The Meio-, Macro-, And Megafauna From The Azores Marine Park (Mid-Atlantic Ridge), Neus Campanyà-Llovet, Amanda E. Bates, Daphne Cuvelier, Eva Giacomello, Diana Catarino, Andrew J. Gooday, Björn Berning, Blanca Figuerola, Manuel A. E. Malaquias, Carlos J. Moura, Joana R. Xavier, Tracey Sutton, Laurence Fauconnet, Sofia P. Ramalho, Bárbara De Moura Neves, Gui M. Machado, Tammy Horton, Andrey V. Gebruk, Kirill Minin, Joël Bried, Tina Molodtsova, Mónica A. Silva, Anna Dilman, Antonina Kremenetskaia, Eudriano F. S. Costa, Jameson Clarke, Helen R. Martins, Christopher K. Pham, Marina Carreiro-Silva, Ana Colaço

Marine & Environmental Sciences Faculty Articles

Trait-based approaches that complement taxonomy-based studies have increased in popularity among the scientific community over the last decades. The collection of biological and ecological characteristics of species (i.e., traits) provides insight into species and ecosystem vulnerability to environmental and anthropogenic changes, as well as ecosystem functioning. Here, we present the FUN Azores trait database, describe our approach, evaluate its scope, compare it to other marine trait databases, and explore the spatial distribution of its traits with “functional maps.” While most of the available trait databases to date contain essential information to understand the functional diversity of a taxonomic or functional …

Ecomorphology Of A Predatory Deep-Sea Fish Family: Does Trophic Specialization Drive Hyperspeciation?, Ryan P. Mcgonagle, David Kerstetter, Danté Fenolio, Tracey Sutton

Marine & Environmental Sciences Faculty Articles

Two of the main drivers of speciation among aquatic vertebrates are physical isolation (e.g., lakes and streams) and micro-niche availability (e.g., tropical reefs). In both regards, the mesopelagic domain of the open ocean, Earth’s second largest cumulative ecosystem (behind only the bathypelagic domain), would seem retardant. Ocean circulation makes isolation rare on both contemporary and geological time/space scales, and the lack of substrate precludes stable micro-niches. Paradoxically, some pelagic taxa demonstrate much higher-than-expected species richness on regional scales. A prime example is the dragonfish family Stomiidae, the most speciose family of mesopelagic fishes, owing largely to the subfamily Melanostomiinae (scaleless …

Physiological And Transcriptomic Responses Of Two Artemisia Californica Populations To Drought: Implications For Restoring Drought-Resilient Native Communities, Hagop S. Atamian Dr., Jennifer L. Funk

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

As climate change brings drier and more variable rainfall patterns to many arid and semi-arid regions, land managers must re-assemble appropriate plant communities for these conditions. Transcriptome sequencing can elucidate the molecular mechanisms underlying plant responses to changing environmental conditions, potentially enhancing our ability to screen suitable genotypes and species for restoration. We examined physiological and morphological traits and transcriptome sequences of coastal and inland populations of California sagebrush (Artemisia californica), a critical shrub used to restore coastal sage scrub vegetation communities, grown under low and high rainfall environments. The populations are located approximately 36 km apart but …

Benthic Habitat Mapping Of Mountain Top Bank Within The Northern Gulf Of Mexico Through Integrated Geophysical And Visual Data Analysis, Bethany Pertain

Master's Theses

Mesophotic coral ecosystems (MCEs) are among the seafloor ecosystems that have been poorly studied throughout the world’s oceans, but they are a vital and diverse ecosystem that should be prioritized for future mapping and ecological studies. Priority should be given to them because they possess natural, social, and economic values, and face a variety of threats, all of which, if not better understood will result in the loss of this unique ecosystem. Insights into these ecosystems, among other deep-sea environments, are lacking due to difficulty accessing them, inherent lag between data collection by an autonomous system and observation by a …

Futures On Dry Ground: Anthropology And Coastal Planning, Theodore Hilton, Sheehan Moore

Publications and Research

Around the world, governments, industry, and other actors are creating plans to save coasts from environmental crisis. Louisiana is one prominent example: levees and other measures protect oil and gas infrastructure from inundation as the wetlands buffer rapidly erodes—in large part due to that same industry. The state’s primary answer to land loss is a $50 billion Coastal Master Plan. To illuminate such responses in Louisiana and globally, this article reviews emerging literature and frames an anthropology of coastal planning around three themes: (1) novel orientations toward time and space, (2) the reproduction of power and capital in the name …

Abundance And Distribution Of Fish Larvae In The Central Coast Of The Algerian Sea, Etsouri Mohamed, Khames Ghollame Ellah Yacine, Seridji Rabea

Journal of Marine Science and Technology–Taiwan

This study was conducted on a seasonal basis in five (5) stations along the central Algerian coast between April 2013 and April 2014 aboard professional fishing boats. Horizontal plankton tows with a WP2-type net were used to collect ichthyoplankton samples. At each station, temperature, salinity, and chlorophyll-a levels were measured. We identified the larvae of 18 species from 11 different families by sorting ichthyoplankton (Clupeidae, Engraulidae, Gobidae, Gonostomatidae, Mugilidae, Myctophidae, Scombridae, Sparidae, Carangidae, Labridae, Blennidae). Redundancy analysis (RDA) was used to determine the relationship between the abundance of harvested larvae and environmental variables. The results show a clear dominance of …

Larval Ecology Of Atlantic Bluefin Tuna (Thunnus Thynnus): New Insights From Otolith Microstructure, Biotic, And Abiotic Analyses From The Gulf Of Mexico And Mediterranean Sea, Estrella Malca

All HCAS Student Capstones, Theses, and Dissertations

Atlantic bluefin tuna (ABT), Thunnus thynnus, spawn in the Gulf of Mexico (GoM) and the Mediterranean Sea (MED). Spawning occurs within narrow temporal and environmental parameters. Efforts to characterize growth of ABT in wild conditions revealed a wide range of growth variability during the early life stages. This series of studies examined potential biotic and abiotic influences of larval growth from seven ABT cohorts, and identified several key drivers of growth for this commercially valuable species. A detailed investigation of larval dynamics using otolith microstructure was conducted as follows. First, companion growth curves and stable isotope analysis from the same …

The Significance Of Cephalopod Beaks As A Research Tool: An Update, José C. Xavier, Alexey V. Golikov, José P. Queirós, Catalina Perales-Raya, Rigoberto Rosas-Luis, José Abreu, Giambattista Bello, Paco Bustamante, Juan C. Capaz, Valerie H. Dimkovikj, Angel F. González, Hugo Guímaro, Airam Guerra-Marrero, José N. Gomes-Pereira, Jorge Hernández-Urcera, Tsunemi Kubodera, Vladimir Laptikhovsky, Evgenia Lefkaditou, Fedor Lishchenko

Marine Science

The use of cephalopod beaks in ecological and population dynamics studies has allowed major advances of our knowledge on the role of cephalopods in marine ecosystems in the last 60 years. Since the 1960’s, with the pioneering research by Malcolm Clarke and colleagues, cephalopod beaks (also named jaws or mandibles) have been described to species level and their measurements have been shown to be related to cephalopod body size and mass, which permitted important information to be obtained on numerous biological and ecological aspects of cephalopods in marine ecosystems. In the last decade, a range of new techniques has been …

Spatial Variation In Hard Bottom Coral Communities Of The Coastal West Florida Shelf, Nicole Blank, Sandra D. Brooke, Brian K. Walker

Marine & Environmental Sciences Faculty Articles

Hard bottom coral and sponge communities differ along portions of the West Florida Shelf (WFS) in species occurrence, diversity, and/or size. However, the composition and spatial distribution of these communities are not well understood. Community transitions have been proposed in the central portion of the WFS around Tampa Bay, Cedar Key, and as far south as Charlotte Harbor, but supporting data are sparse. Fifteen sites in three regions of Florida were surveyed for species distribution, density, and demographics. Distinct communities were found between St Teresa, Hudson, and Tarpon Springs. Coral and sponge densities were highest off Tarpon Springs followed by …

Limited Rigor In Studies Of Raptor Mortality And Mitigation At Wind Power Facilities, Tara J. Conkling, Christopher J.W. Mcclure, Sandra Cuadros, Scott R. Loss, Todd E. Katzner

United States Geological Survey: Staff Publications

Wind power is an expanding source of renewable energy. However, there are ecological challenges related to wind energy generation, including collisions of wildlife with turbines. Lack of rigor, and variation in study design, together limit efforts to understand the broad-scale effects of wind power infrastructure on wildlife populations. It is not clear, however, whether these types of limitations apply to groups of birds such as raptors that are particularly vulnerable to negative effects of wind energy. We reviewed 672 peer-reviewed publications, unpublished reports, and citations from 321 wind facilities in 12 countries to evaluate methods used to monitor and mitigate …

Growth And Reproduction In Gulf Of Mexico Black Corals (Antipatharians) In Field And Laboratory Studies, Victoria E. Salinas

Theses and Dissertations

Black corals provide an important ecosystem of marine life and are found throughout all the oceans of the world at depths between 2 and 8,600 m. However, little is understood about their life history and the factors that control the distribution of black corals, particularly in the Gulf of Mexico (GoM). Given the impacts of the Deepwater Horizon oil spill on soft corals (e.g., black corals and octocorals) in the GoM, studies of their growth and reproductive biology in both natural and aquaculture environments are crucial for restoration efforts. The objectives of this study were to examine reproductive processes, compare …

In Situ Observations Of Fish Attraction To Light-Emitting Diodes On An Undersea Observation Deck, Makoto Tomiyasu, Yoko Tanouchi, Yasuzumi Fujimori, Minato Kaji, Takuma Hayashi, Naoto Matsubara, Hiroki Yasuma, Susumu Shimizu, Seiji Katakura

Journal of Marine Science and Technology–Taiwan

Many fisheries employ fishing lights to manipulate the behaviors of target fish and to attract them toward the light; however, relatively few long-time observations of fish attraction have been performed in the field. Here, an underwater observation deck was used to examine the differences in the fish-attracting effect of light-emitting diode (LED) lights on the number of attracted fish and on their behavior in the field, using white-edged rockfish as the target species. A total of 604 ± 324, 307 ± 203 and 171 ± 106 white-edged rockfish individuals were attracted to the observation window when it was illuminated with …

Anthropogenic Impacts On The Glowworm Cave, Waitomo, New Zealand: A Microclimate Management Approach, Chris Hendy, David J. Merritt, Shannon Corkill

International Journal of Speleology

Waitomo Glowworm Cave is a highly visited cave where the highlight is viewing the bioluminescence display of a large colony of glowworms. The visitation levels result in the build-up of anthropogenic CO₂, to the extent that it could cause corrosion of speleothems. The cave experiences chimney-effect ventilation with air flowing either upward or downward through the main cave chambers depending on air density differences between the cave and the outside environment. Lack of airflow leads to CO₂ build-up; however, unrestricted airflow can draw in cool, dry air which is harmful to the glowworms. Consequently, airflow is managed …

Validation Of The Use Of Clathromorphum Compactum Growth And Skeletal Δ18o As A Proxy For Seawater Conditions, Teagan Mcmahon

Pitzer Senior Theses

Crustose coralline algae (CCA) are important organisms that create benthic habitat in the photic zone of oceans worldwide. CCAs mechanisms of photosynthesis and calcification may, in some cases, make them vulnerable to climate change and ocean acidification. Therefore, CCA are important not only for their ecological role within ecosystems but also for their ability to indicate the effects that ocean acidification and climate change may have on other marine calcifying organisms. Some species of CCA are known to be useful recorders of paleo oceanic conditions. These climate archives and reconstructions of past environmental conditions are important for understanding past changes …

Lake Huron Shoreline Analysis, Shubham Satish Nandanwar

Theses and Dissertations (Comprehensive)

Lake Huron is a popular tourist destination and is home to several businesses and residents. Since the shoreline is dynamic and is subject to change over the years due to several factors such as a change in water level, soil type, human encroachment, etc., these locations tend to encounter floods due to increased water levels and wind speed. This causes erosion and loss to the properties along the shoreline.

This study is based on two areas of interest named Pinery Provincial Park and Sauble Beach which are located on the shoreline of Lake Huron where Pinery Provincial Park is a …