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Articles 1 - 30 of 251
Full-Text Articles in Entire DC Network
Distribution And Diversity Of Ponyfishes (Perciformes, Leiognathidae) In The Waters Of Sonmiani’S Bay, Balochistan, Pakistan, Noor Hawa, Noor Us Saher
Distribution And Diversity Of Ponyfishes (Perciformes, Leiognathidae) In The Waters Of Sonmiani’S Bay, Balochistan, Pakistan, Noor Hawa, Noor Us Saher
Journal of Bioresource Management
The current research was conducted during October 2020 to September 2021 in bay waters of Sonmiani, Balochistan as aimed to fill the paucity of diversity and distribution of research for the bay waters. Monthly fish samples were collected using gill net and beach seine during high and low tide. In the present study, out of nine species, the six species were identified as a new report species belongs to Leiognathidae family. Secutor interruptus (N=132) was the most abundant species whereas the least abundant species collected during the study period was Karalla daura (N=1). Highest diversity (1.37) was estimated during the …
Using Environmental Dna (Edna) As A Tool To Detect Sharks And Rays Along The Coast Of Quintana Roo, Mexico, Sara T. Norment
Using Environmental Dna (Edna) As A Tool To Detect Sharks And Rays Along The Coast Of Quintana Roo, Mexico, Sara T. Norment
All HCAS Student Capstones, Theses, and Dissertations
Elasmobranchs play a critical ecological role in marine environments, yet many populations worldwide remain poorly known and monitored. This is particularly true in Mexico despite its high biodiversity and ongoing fishing pressures. Traditional monitoring methods, such as commercial fisheries and fishery-independent surveys using longlines or nets, are often limited, leaving important knowledge gaps. Previous studies have shown that environmental DNA (eDNA), small traces of DNA left behind in the water column from feces, skin, or mucus, is a transformative, non-invasive tool for detecting elasmobranch presence and diversity across marine ecosystems.
This project used eDNA metabarcoding to detect and identify elasmobranch …
Long-Term Spatiotemporal Change In Coral Reef Fish Populations And Communities In The Philippines, John Christopher Whalen
Long-Term Spatiotemporal Change In Coral Reef Fish Populations And Communities In The Philippines, John Christopher Whalen
Biological Sciences Theses & Dissertations
The Visayas Region of the Philippines is a global epicenter of marine fish biodiversity. Hypotheses attribute this peak of species richness within the Coral Triangle to processes that occur at geological time scales. However, changes in biodiversity may occur on ecological time scales, allowing for the assessment of the potential impact of anthropogenic activities. Recent declines in genetic, species, and ecosystem diversity have been observed in the tropics, including the Philippines. Within the Philippines the Visayas Region is considered the epicenter of species adversity due to anthropogenic stressors such as habitat degradation, overfishing, and harvesting individuals for the aquarium trade. …
Environmental Assessment Of The Shatt Al-Basra Canal: Petroleum Hydrocarbons, Heavy Metals And Water Quality, Mohammed A. Jasim Aldoghachi, Bassam A. B. Alabdul Aziz, Shurooq Al-Mosawi
Environmental Assessment Of The Shatt Al-Basra Canal: Petroleum Hydrocarbons, Heavy Metals And Water Quality, Mohammed A. Jasim Aldoghachi, Bassam A. B. Alabdul Aziz, Shurooq Al-Mosawi
Journal of King Abdulaziz University: Marine Science
The environmental assessment of the Shatt al-Basra Canal in the area of the regulatory was studied. Petroleum hydrocarbons and heavy elements (cobalt (Co), zinc (Zn), lead (Pb), cadmium (Cd), and chromium (Cr)) in the waters of this area were analyzed. In addition, some water quality characteristics were evaluated (salinity, total dissolved solids (TDS), pH, oxygen, biological oxygen demand (BOD5), chemical oxygen demand (COD), nitrate (NO3-), nitrite (NO2-), phosphate (PO4 -3), and ammonia (NH3). Petroleum hydrocarbons had been recorded in studied area and dominated with medium-chain alkanes, namely decane …
Geographic Range And Body Size Influence Abundance Patterns In Reef Fishes, M. F. Maxwell, D. R. Barneche, R. Divieso, S. R. Floeter, O. J. Luiz, A. L. Luza, M. R. Pie, A. C. Siqueira, M. G. Bender
Geographic Range And Body Size Influence Abundance Patterns In Reef Fishes, M. F. Maxwell, D. R. Barneche, R. Divieso, S. R. Floeter, O. J. Luiz, A. L. Luza, M. R. Pie, A. C. Siqueira, M. G. Bender
Research outputs 2022 to 2026
Aim: Understanding how body size and geographic range size influence species abundance is central to macroecology. Here, we characterized these relationships for reef fishes, the world's most diverse vertebrate group, across global and regional scales. Location: Global tropical and subtropical reefs. Time Period: Current. Major Taxa Studied: Reef-associated fishes. Methods: We compiled a comprehensive dataset on abundance, body size and geographic range size for 828 reef fish species. Abundance was measured as density (ind/m2) using transect-based observational data. To analyse global-scale patterns, we applied Bayesian quantile regressions and Bayesian phylogenetic regressions to account for phylogenetic relatedness. We also …
Ecological Insights And Management Implications Of The Global Migratory Connectivity Of Green Turtles, Jaime Restrepo, Dina Nisthar, Harris Wei-Khang Heng, Lily K. Bentley, Corrie Curtice, Sarah Deland, Ei Fujioka, Patrick N. Halpin, Sarah K. Poulin, Roldán A. Valverde
Ecological Insights And Management Implications Of The Global Migratory Connectivity Of Green Turtles, Jaime Restrepo, Dina Nisthar, Harris Wei-Khang Heng, Lily K. Bentley, Corrie Curtice, Sarah Deland, Ei Fujioka, Patrick N. Halpin, Sarah K. Poulin, Roldán A. Valverde
School of Earth, Environmental, & Marine Sciences Faculty Publications
Aim
Green turtles are a widely distributed and highly migratory species; despite extensive data on their movement, there is no species-specific global synthesis on the subject. Based on three decades of published literature and building on previous global analyses, we developed a global network model of migratory connectivity for green turtles to better understand their spatial biology.
Location
Global.
Time Period
1990–2022.
Major Taxa Studied
Green Sea Turtle (Chelonia mydas).
Methods
We conducted a structured literature review extracting georeferenced information on the movement of green turtles from 1990 to 2022, aggregating this information into a single connectivity model, …
Pollutant Load Reduction In Sarasota Bay, Florida (Usa): Target Development, Implementation, And Outcomes, David Tomasko, Mike Wessel, Jon Perry, Chris Anastasiou, Ryan Gandy
Pollutant Load Reduction In Sarasota Bay, Florida (Usa): Target Development, Implementation, And Outcomes, David Tomasko, Mike Wessel, Jon Perry, Chris Anastasiou, Ryan Gandy
Gulf and Caribbean Research
Between 2006 and 2012, seagrass coverage across Sarasota Bay expanded by 1,108 ha, a 28% increase. During the subsequent years of 2012−2020, 830 ha of seagrass were lost, a 16% decline. In response to these findings, resource management efforts focused on determining the likely reason(s) why those 2 periods had such contrasting trends, to come up with strategies to reverse these losses. Based on results from the seagrass data, the 7—y period of 2006−2012 was designated a “reference period” and water quality data were compared against the subsequent 7—y designated “degraded period” of 2013−2019. Annual average chlorophyll-a (chl-a …
Preliminary Survey Of Subtidal Crustaceans On Southeast Sapelo Island, Georgia, Elise C. Mirabella, Kali Holierhoek, Kristine N. White Ph.D.
Preliminary Survey Of Subtidal Crustaceans On Southeast Sapelo Island, Georgia, Elise C. Mirabella, Kali Holierhoek, Kristine N. White Ph.D.
Georgia Journal of Science
The subtidal zone is the area below the low tide line that supports a wide variety of organisms, including subtidal crustaceans, which are understudied on Sapelo Island, GA. To investigate the impact of wave action on biodiversity and develop baseline data, the biodiversity of subtidal crustaceans from two beaches was compared. It was hypothesized that the beach protected from wave action would have higher biodiversity than the beach exposed to wave action. To collect the crustaceans, three different sampling methods were used on each beach: D-net, beam trawl, and Yabbi pump. The beach exposed to wave action yielded higher biodiversity …
Edna Surveys For The Critically Endangered Caribbean Staghorn Coral, Acropora Cervicornis (Lamarck, 1816), Pari Elaine Cribbins
Edna Surveys For The Critically Endangered Caribbean Staghorn Coral, Acropora Cervicornis (Lamarck, 1816), Pari Elaine Cribbins
All HCAS Student Capstones, Theses, and Dissertations
Historically, Acropora cervicornis was a dominant coral on Caribbean reef systems, but an outbreak of white band disease in the late 1970s marked the beginning of devastating, multi-decadal population declines that led to the coral being listed as “critically endangered” on the IUCN Red List in 2022. Today, after a record-setting marine heat wave in 2023 triggered a mass bleaching event on Florida’s Coral Reef (FCR), A. cervicornis is considered functionally extinct on the FCR. While individuals of A. cervicornis do remain on the FCR, the small population size of the coral makes in situ surveys difficult. However, surveys using …
Taxonomy Of Endophytic Fungi Associated With Vallisneria Neotropicalis, Md. Arafat Rashid
Taxonomy Of Endophytic Fungi Associated With Vallisneria Neotropicalis, Md. Arafat Rashid
Graduate Theses and Dissertations (2019 - present)
This study presents the first comprehensive taxonomic and ecological investigation of endophytic fungi (EF) associated with the submerged aquatic macrophyte Vallisneria neotropicalis in the southern United States. Over a 12 month period, from April 2023 to March 2024, leaf samples were collected from two distinct sites in Mobile Bay, Alabama a disturbed, brackish Causeway location and a cleaner, less impacted site at Meaher State Park. Using culture dependent methods, a total of 257 fungal endophytes were isolated from 1,200 leaf segments. All isolates belonged to the phylum Ascomycota, distributed across 3 classes, 6 orders, 10 families, and 19 taxa. The …
Emerging Policies On Marine Biodiversity Beyond National Jurisdiction Governance, Jessie Neta Jeffrey
Emerging Policies On Marine Biodiversity Beyond National Jurisdiction Governance, Jessie Neta Jeffrey
World Maritime University Dissertations
No abstract provided.
Identification Of Crustose Coralline Algae Species In Florida And Their Ability To Induce Larval Settlement Of Caribbean Corals, Danielle Macias
Identification Of Crustose Coralline Algae Species In Florida And Their Ability To Induce Larval Settlement Of Caribbean Corals, Danielle Macias
All HCAS Student Capstones, Theses, and Dissertations
Crustose coralline algae (CCA) are a diverse, globally spread and yet poorly studied group of benthic organisms. They act as settlement cues for coral larvae, but this interaction is often species-specific, as CCA species can be either inducers or inhibitors to larval settlement and metamorphosis. Despite this importance, information on Caribbean CCA distribution, diversity, and impact on coral species is limited due to the difficulty in identifying them. In the present study, CCA samples were collected from seven different reef sites in the southeastern region of Florida’s Coral Reef and genetically identified using molecular analyses. Some of the samples collected …
Advancing Marine Animal Movement Studies Using An Open Innovation Framework, Jacob Levenson
Advancing Marine Animal Movement Studies Using An Open Innovation Framework, Jacob Levenson
Graduate Doctoral Dissertations
This dissertation investigates the application of open innovation to migratory marine animal movement studies, addressing critical challenges in understanding, managing and ultimately conserving highly mobile and migratory species (HMMS). The species examined herein, including manta rays, sea turtles, and marine mammals, face threats including habitat disruption and behavioral changes to adapt to anthropogenic stressors. Traditional monitoring techniques, while valuable, are often costly, limited in scale, and protected by proprietary intellectual property, all of which decrease accessibility. Ambitious conservation goals, such as protecting 30% of the ocean by 2030, require more data that are indubitably sharable and thus will need to …
Ecological Specialisation Of Reef Fishes Peaks In Global Biodiversity Hotspots, Zoé Delecambre, Renato A. Morais, Alexandre C. Siqueira, Emma Paul Costesec, Caroline E. Dubé, Sergio R. Floeter, Alan M. Friedlander, Fabien Leprieur, Yves Letourneur, Lucas T. Nunes, Jordan M. Casey, Valeriano Parravicini
Ecological Specialisation Of Reef Fishes Peaks In Global Biodiversity Hotspots, Zoé Delecambre, Renato A. Morais, Alexandre C. Siqueira, Emma Paul Costesec, Caroline E. Dubé, Sergio R. Floeter, Alan M. Friedlander, Fabien Leprieur, Yves Letourneur, Lucas T. Nunes, Jordan M. Casey, Valeriano Parravicini
Research outputs 2022 to 2026
Aim: The role of ecological specialisation in shaping biogeographic and evolutionary patterns remains unresolved. To date, few studies have quantitatively examined consumer niche breadth at a global scale. We describe global biogeographic and diversification patterns of specialisation, measured using trophic and thermal niches, for a highly diverse assemblage of consumers: reef fishes. First, we investigated the confluence of specialisation with global biogeographic patterns in species richness and reef area. Then, we tested whether these patterns could be explained by differences in diversification rates and geographic ranges. Location: Tropical reefs across the globe. Time Period: Present. Major Taxa Studied: Reef fishes. …
Pluredecadal Patterns Of The Harmful Algal Blooms In The Highly Dynamic Marine Ecosystem Of Alexandria (Egypt): A Review, Samia K. Mikhail, Wagdy Labib
Pluredecadal Patterns Of The Harmful Algal Blooms In The Highly Dynamic Marine Ecosystem Of Alexandria (Egypt): A Review, Samia K. Mikhail, Wagdy Labib
Blue Economy
The long-term study of phytoplankton variability in the coastal waters of Alexandria encounters significant challenges due to several factors such as inconsistency in sampling efforts conducted across various spatial and temporal scales, limitations of short-term monitoring methods, rapid urbanization and economic expansion, and their diverse eco-environmental impacts. The article analyzes a quantitative and qualitative dataset on algal bloom variabilities in Alexandria marine ecosystem from 1992 to 2023, highlighting changes in bloom patterns and trends such as annual cycles, short-term trends, rapid turnover rates of bloom structures, recurrent blooms of various classes, escalation in the frequency and magnitude, unusual episodic events, …
Determining The Physiological And Behavioral Tolerance To Hypoxia In Two Species Of Rockfish (Sebastes Spp.), Makenna Chan
Determining The Physiological And Behavioral Tolerance To Hypoxia In Two Species Of Rockfish (Sebastes Spp.), Makenna Chan
Theses
In the eastern North Pacific, the oxygen minimum zone naturally shoals seasonally and impacts demersal fish habitat along the continental margins and on offshore seamounts. This hypoxic layer has been shoaling in recent decades, likely affecting the habitat and distribution of commercially-important fish species such as rockfishes (genus Sebastes). Respirometry and shuttle box behavioral experiments were used to determine the hypoxia sensitivities of two rockfish species with contrasting movement patterns and habitat use: cowcod (Sebastes levis) and bocaccio (Sebastes paucispinis). Although both species inhabit similar deep-water, rocky-reef habitat, they have different lifestyles, in which cowcod …
Development And Validation Of Rapid Edna Detection Method For Yellow Mud Turtle, Kinosternon Flavescens: A Field Study In South Texas, Usa, Sakib Tahmid Rishan, Richard Kline, Md Saydur Rahman
Development And Validation Of Rapid Edna Detection Method For Yellow Mud Turtle, Kinosternon Flavescens: A Field Study In South Texas, Usa, Sakib Tahmid Rishan, Richard Kline, Md Saydur Rahman
School of Earth, Environmental, & Marine Sciences Faculty Publications
The conservation of freshwater turtle species depends on precise and effective monitoring techniques. Environmental DNA (eDNA) analysis is a potential method for identifying cryptic and elusive turtle species in aquatic ecosystems. eDNA analysis can help to identify key regions for conservation efforts and monitor changes in population levels over time. This study aims to evaluate the effectiveness of a rapid eDNA detection method for the yellow mud turtle (Kinosternon flavescens, an indicator species that is endangered in some states in the USA), which inhabits local oxbow lakes (e.g., resacas) in Cameron County, South Texas. A species-specific nested PCR …
Pygoscelis Penguins Prefer Different Oceanographic And Terrestrial Habitats During The Austral Summer, Katherine L. Gallagher, Rachel Herman, Katherine Walton, Michael S. Dinniman, Heather J. Lynch
Pygoscelis Penguins Prefer Different Oceanographic And Terrestrial Habitats During The Austral Summer, Katherine L. Gallagher, Rachel Herman, Katherine Walton, Michael S. Dinniman, Heather J. Lynch
OES Faculty Publications
Pygoscelis penguins interact with both terrestrial and marine environments, especially during the austral summer when they raise their chicks. Accessible ice-free ground spaces serve as locations for penguins to build colonies and successfully raise chicks while the surrounding marine environment serves as the foraging grounds for adult birds. Penguins must be able to navigate through the waters around their colonies to forage for Antarctic krill (Euphausia superba), their primary prey during the austral summer. Krill, whose distributions are driven partially by the surrounding physics and partially by their behaviors, must also be plentiful in the waters near the …
Environmental Dna Identifies Coastal Plant Community Shift 1,000 Years Ago In Torrens Island, South Australia, Nicole R. Foster, Alice R. Jones, Oscar Serrano, Anna Lafratta, Paul S. Lavery, Kor-Jent Van Dijk, Ed Biffin, Bronwyn M. Gillanders, Jennifer Young, Pere Masque, Patricia S. Gadd, Geraldine E. Jacobsen, Atun Zawadzki, Andria Greene, Michelle Waycott
Environmental Dna Identifies Coastal Plant Community Shift 1,000 Years Ago In Torrens Island, South Australia, Nicole R. Foster, Alice R. Jones, Oscar Serrano, Anna Lafratta, Paul S. Lavery, Kor-Jent Van Dijk, Ed Biffin, Bronwyn M. Gillanders, Jennifer Young, Pere Masque, Patricia S. Gadd, Geraldine E. Jacobsen, Atun Zawadzki, Andria Greene, Michelle Waycott
Research outputs 2022 to 2026
Anthropogenic activities are causing detrimental changes to coastal plants– namely seagrass, mangrove, and tidal marshes. Looking beyond recent times to past vegetation dynamics is critical to assess the response and resilience of an environment to change. Here, we develop a high-resolution multi-proxy approach, providing a new evidence base to decipher long-term change in coastal plant communities. Combining targeted environmental DNA analysis with chemical analysis of soils, we reconstructed 4,000 years of change at a temperate wetland on Torrens Island South Australia and identified an ecosystem shift that occurred ~ 1000 years ago. What was once a subtidal seagrass system shifted …
In Hot Water: Uncertainties In Projecting Marine Heatwaves Impacts On Seagrass Meadows, Paula S. Hatum, Kathryn Mcmahon, Kerrie Mengersen, Jennifer K. Mcwhorter, Paul P.Y. Wu
In Hot Water: Uncertainties In Projecting Marine Heatwaves Impacts On Seagrass Meadows, Paula S. Hatum, Kathryn Mcmahon, Kerrie Mengersen, Jennifer K. Mcwhorter, Paul P.Y. Wu
Research outputs 2022 to 2026
Seagrass ecosystems, vital as primary producer habitats for maintaining high biodiversity and delivering numerous ecosystem services, face increasing threats from climate change, particularly marine heatwaves. This study introduces a pioneering methodology that integrates Dynamic Bayesian Networks of ecosystem resilience with climate projections, aiming to enhance our understanding of seagrass responses to extreme climate events. We developed cutting-edge metrics for measuring shoot density and biomass in terms of population and site extinction, presented as annual ratios relative to their respective baselines. These metrics include associated uncertainties and projected recovery times. This innovative approach was applied in a case study focusing on …
Trophic Ecology Of Black Swallowers (Scombriformes: Chiasmodontidae: Chiasmodon) In The Deep-Pelagic Gulf Of Mexico, Travis J. Kirk
Trophic Ecology Of Black Swallowers (Scombriformes: Chiasmodontidae: Chiasmodon) In The Deep-Pelagic Gulf Of Mexico, Travis J. Kirk
All HCAS Student Capstones, Theses, and Dissertations
The ecology of deep-pelagic predatory fishes remains poorly understood despite their importance as ecosystem regulators and energy transfer vectors. This study investigated the trophic ecology of three species of the predatory fish genus Chiasmodon (“black swallowers”) in the Gulf of Mexico, a region that serves as an analog for the global low-latitude deep pelagial, the world’s largest cumulative ecosystem. Foraging habits (e.g., selectivity, chronology, daily ration) of an “advanced” evolutionary fish in a system that is otherwise dominated by basal fish taxa, were quantitatively estimated via high-resolution stomach content analysis. A quantitative dataset of both predator and prey abundance, the …
An Aggregation Of The Pandalid Shrimp, Heterocarpus Ensifer, On Deep Reef Habitats Of The West Florida Slope, Eastern Gulf Of Mexico, Steve W. Ross
An Aggregation Of The Pandalid Shrimp, Heterocarpus Ensifer, On Deep Reef Habitats Of The West Florida Slope, Eastern Gulf Of Mexico, Steve W. Ross
Gulf and Caribbean Research
Heterocarpus ensifer A. Milne—Edwards (1881) (Crustacea: Pandalidae), armed nylon shrimp, is widely distributed in the western and eastern North Atlantic Ocean. In the western Atlantic this shrimp occurs from off North Carolina to Brazil and in the Gulf of Mexico (GOM), western Bahamas, and Caribbean Sea at depths of 170—885 m. Despite its widespread occurrence, ecology or biology information for this species are sparse, and in situ observations of abundance, behavior and habitat preferences are particularly lacking. During extensive submersible and ROV observations on and near deep—reefs in the north—central and eastern GOM, a remarkably large aggregation of H. ensifer …
Monitoring Faunal Responses To Biodegradable Oyster Reef Restoration Materials With Camera Traps, Tara L. Blanchard
Monitoring Faunal Responses To Biodegradable Oyster Reef Restoration Materials With Camera Traps, Tara L. Blanchard
Honors Undergraduate Theses
Restoration of the oyster reefs has become increasingly crucial due to great population declines around the globe. Intertidal oyster reefs provide essential foraging and loafing grounds to many faunal species, including several threatened/endangered wading bird species. Biodegradable oyster reef restoration materials have been introduced to avoid potential plastic pollution from traditional materials. Studies have shown success regarding oyster recruitment rates to these materials. However, their impacts on fauna using restored oyster reefs are unknown. This project aims to evaluate oyster reef restoration using biodegradable materials to increase faunal diversity, abundance, and foraging behaviors. Camera traps were deployed to observe fauna …
Escarpments Within Mediterranean Seagrass Posidonia Oceanica Meadows Increase Habitat Heterogeneity And Structural Complexity Enhancing Fish Diversity And Biomass, Enric Gomis, Enric Ballesteros, Irene Bernabeu, Karina Inostroza, Miguel A. Mateo, Oscar Serrano
Escarpments Within Mediterranean Seagrass Posidonia Oceanica Meadows Increase Habitat Heterogeneity And Structural Complexity Enhancing Fish Diversity And Biomass, Enric Gomis, Enric Ballesteros, Irene Bernabeu, Karina Inostroza, Miguel A. Mateo, Oscar Serrano
Research outputs 2022 to 2026
Seagrass meadows provide important ecosystem services including carbon sequestration, coastal protection from erosion, and sustained biodiversity and fisheries thereby improving the wellbeing and livelihoods of coastal communities. The erosion of millenary deposits of intertwined roots and rhizomes of Posidonia results in the formation of three-dimensional structures named escarpments that constitute a biogenic reef habitat. However, the natural history of seagrass escarpments including their formation processes and their role as habitat for reef fauna and flora remains poorly understood. This research located and characterized Posidonia oceanica escarpments in Menorca (Balearic Islands) and compared structural complexity and fish assemblages among seagrass escarpments, …
The Endoparasite Fauna Of Mesopredatory Mesopelagic Teleosts, Alexander U. Rayburn
The Endoparasite Fauna Of Mesopredatory Mesopelagic Teleosts, Alexander U. Rayburn
All HCAS Student Capstones, Theses, and Dissertations
The ecology of the mesopelagic zone is an understudied area of the open ocean, with few diet studies even for dominant fish species. Since endoparasites are generally transmitted trophically, descriptions of the parasite communities within fishes can often provide additional insights on food web interactions. This project assesses the endoparasite faunal community of mesopredatory mesopelagic teleosts to better understand mesopelagic food webs in the South Atlantic Bight. Fishes in the Families Alepisauridae (lancetfishes), Gempylidae (snake mackerels), Bramidae (pomfrets), and Scombrolabracidae (longfin escolar) are frequent bycatch in the pelagic longline fishery targeting swordfish Xiphias gladius and thunnid tunas, yet the ecology …
Utility Of Body And Otolith Morphometry To Discriminate Cryptic Juveniles Of Two Sympatric Red Snappers (Perciformes: Lutjanidae), Miwa Takahashi, Corey B. Wakefield, Stephen J. Newman, Kyle B. Hillcoat, Benjamin J. Saunders, Euan S. Harvey
Utility Of Body And Otolith Morphometry To Discriminate Cryptic Juveniles Of Two Sympatric Red Snappers (Perciformes: Lutjanidae), Miwa Takahashi, Corey B. Wakefield, Stephen J. Newman, Kyle B. Hillcoat, Benjamin J. Saunders, Euan S. Harvey
Fisheries Research Articles
The sympatric red snappers, Lutjanus erythropterus and Lutjanus malabaricus, are highly valued by commercial and recreational fishers along the tropical northern coasts of Australia and throughout their distribution. Studies on the life history and ecology of these congeners are confounded by difficulties in distinguishing the cryptic juveniles of each species (i.e., < 200 mm total length). This study aimed to validate a robust and cost-effective method to discriminate these juveniles using body and/or otolith morphometric data in a multivariate analysis. Juvenile samples were collected from the northwest (n = 71) and northeast (n = 19) coasts of Australia, and species identification was confirmed using DNA barcoding. The most parsimonious multivariate models achieved accurate species prediction rates of 98.8%, which consisted of just three body variables (dorsal fin length, the distance from the snout to the anterior edge of the eye, and either jaw length or distance from the snout to the preoperculum). The high level of discrimination for these cryptic juveniles highlights the robustness of this morphometric approach. The slightly lower rate of discrimination using otolith morphology (84.9%) was associated with greater regional variation in L. malabaricus between the northwest and northeast coasts. Slight variations in otolith shape are typically used to determine stock structure, which highlights the potential need to collect samples over a broader area of a species geographic range when using an otolith morphometric discrimination model. The method outlined in this study could be applied to distinguish other cryptic congeneric fish species, including from archived otolith collections. Moreover, this method has the potential to be utilized in assessing species compositions using body measurements from in situ stereo-video.
The Effect Of Water Flow Rates On The Survival And Growth Rates Of Three Caribbean Bouldering Coral Species Juveniles In An Indoor Versus Outdoor Environment, Ian Michael Johnson
The Effect Of Water Flow Rates On The Survival And Growth Rates Of Three Caribbean Bouldering Coral Species Juveniles In An Indoor Versus Outdoor Environment, Ian Michael Johnson
All HCAS Student Capstones, Theses, and Dissertations
Coral reefs are vital ecosystems for the world’s oceans and humanity; however, they are threatened by climate change, disease, and local anthropogenic stressors, and need assistance to recover. Traditional reef restoration efforts (fragmentation and outplanting are helping but are limited in effectiveness by not increasing genetic diversity. Ex situ sexual propagation for corals provides new, genetically different coral recruits. However, this process is laborious, expensive and time consuming, especially at the scale required to effectively contribute to the widespread recovery. To lower costs, two key parameters that require optimization to hasten the growth of coral recruits are water flow and …
Sulfur Cycling Connects Microbiomes And Biogeochemistry In Deep-Sea Hydrothermal Plumes, Zhichao Zhou, Patricia Q. Tran, Alyssa M. Adams, Kristopher Kieft, John A. Breier, Caroline S. Fortunato, Cody S. Sheik, Julie A. Huber, Meng Li, Gregory J. Dick, Karthik Anantharaman
Sulfur Cycling Connects Microbiomes And Biogeochemistry In Deep-Sea Hydrothermal Plumes, Zhichao Zhou, Patricia Q. Tran, Alyssa M. Adams, Kristopher Kieft, John A. Breier, Caroline S. Fortunato, Cody S. Sheik, Julie A. Huber, Meng Li, Gregory J. Dick, Karthik Anantharaman
School of Earth, Environmental, & Marine Sciences Faculty Publications
In globally distributed deep-sea hydrothermal vent plumes, microbiomes are shaped by the redox energy landscapes created by reduced hydrothermal vent fluids mixing with oxidized seawater. Plumes can disperse over thousands of kilometers and their characteristics are determined by geochemical sources from vents, e.g., hydrothermal inputs, nutrients, and trace metals. However, the impacts of plume biogeochemistry on the oceans are poorly constrained due to a lack of integrated understanding of microbiomes, population genetics, and geochemistry. Here, we use microbial genomes to understand links between biogeography, evolution, and metabolic connectivity, and elucidate their impacts on biogeochemical cycling in the deep sea. Using …
Fun Azores: A Functional Trait Database For The Meio-, Macro-, And Megafauna From The Azores Marine Park (Mid-Atlantic Ridge), Neus Campanyà-Llovet, Amanda E. Bates, Daphne Cuvelier, Eva Giacomello, Diana Catarino, Andrew J. Gooday, Björn Berning, Blanca Figuerola, Manuel A. E. Malaquias, Carlos J. Moura, Joana R. Xavier, Tracey Sutton, Laurence Fauconnet, Sofia P. Ramalho, Bárbara De Moura Neves, Gui M. Machado, Tammy Horton, Andrey V. Gebruk, Kirill Minin, Joël Bried, Tina Molodtsova, Mónica A. Silva, Anna Dilman, Antonina Kremenetskaia, Eudriano F. S. Costa, Jameson Clarke, Helen R. Martins, Christopher K. Pham, Marina Carreiro-Silva, Ana Colaço
Fun Azores: A Functional Trait Database For The Meio-, Macro-, And Megafauna From The Azores Marine Park (Mid-Atlantic Ridge), Neus Campanyà-Llovet, Amanda E. Bates, Daphne Cuvelier, Eva Giacomello, Diana Catarino, Andrew J. Gooday, Björn Berning, Blanca Figuerola, Manuel A. E. Malaquias, Carlos J. Moura, Joana R. Xavier, Tracey Sutton, Laurence Fauconnet, Sofia P. Ramalho, Bárbara De Moura Neves, Gui M. Machado, Tammy Horton, Andrey V. Gebruk, Kirill Minin, Joël Bried, Tina Molodtsova, Mónica A. Silva, Anna Dilman, Antonina Kremenetskaia, Eudriano F. S. Costa, Jameson Clarke, Helen R. Martins, Christopher K. Pham, Marina Carreiro-Silva, Ana Colaço
Marine & Environmental Sciences Faculty Articles
Trait-based approaches that complement taxonomy-based studies have increased in popularity among the scientific community over the last decades. The collection of biological and ecological characteristics of species (i.e., traits) provides insight into species and ecosystem vulnerability to environmental and anthropogenic changes, as well as ecosystem functioning. Here, we present the FUN Azores trait database, describe our approach, evaluate its scope, compare it to other marine trait databases, and explore the spatial distribution of its traits with “functional maps.” While most of the available trait databases to date contain essential information to understand the functional diversity of a taxonomic or functional …
Nutrient-Rich Submarine Groundwater Discharge Increases Algal Carbon Uptake In A Tropical Reef Ecosystem, Florybeth Flores La Valle, Julian M. Jacobs, Florence I. Thomas, Craig E. Nelson
Nutrient-Rich Submarine Groundwater Discharge Increases Algal Carbon Uptake In A Tropical Reef Ecosystem, Florybeth Flores La Valle, Julian M. Jacobs, Florence I. Thomas, Craig E. Nelson
All Faculty Open Access Publications
Submarine groundwater discharge (SGD) in high volcanic islands can be an important source of freshwater and nutrients to coral reefs. High inorganic nutrient content is generally thought to augment primary production in coastal systems but when this is delivered via a freshwater vector as is the case with SGD in this study, the effects on productivity are unclear. In the current literature, there is limited evidence for a direct association between SGD and primary productivity of reefs. To elucidate the response of primary productivity to SGD, we conducted spatially and temporally explicit in situ benthic chamber experiments on a reef …