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Marine Biology

University of South Florida

Bacteria

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Coral-Associated Bacterial Diversity Is Conserved Across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, Steve W. Ross Apr 2016

Coral-Associated Bacterial Diversity Is Conserved Across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, Steve W. Ross

Marine Science Faculty Publications

Cold-water corals, similar to tropical corals, contain diverse and complex microbial assemblages. These bacteria provide essential biological functions within coral holobionts, facilitating increased nutrient utilization and production of antimicrobial compounds. To date, few cold-water octocoral species have been analyzed to explore the diversity and abundance of their microbial associates. For this study, 23 samples of the family Anthothelidae were collected from Norfolk (n = 12) and Baltimore Canyons (n = 11) from the western Atlantic in August 2012 and May 2013. Genetic testing found that these samples comprised two Anthothela species (Anthothela grandiflora and Anthothela sp.) and Alcyonium grandiflorum. DNA …


Assessing The Impacts Of Oil-Associated Marine Snow Formation And Sedimentation During And After The Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, David Hollander Mar 2016

Assessing The Impacts Of Oil-Associated Marine Snow Formation And Sedimentation During And After The Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, David Hollander

Marine Science Faculty Publications

The Deepwater Horizon oil spill was the largest in US history, unprecedented for the depth and volume of oil released, the amount of dispersants applied, and the unexpected, protracted sedimentation of oil-associated marine snow (MOS) to the seafloor. Marine snow formation, incorporation of oil, and subsequent gravitational settling to the seafloor (i.e., MOSSFA: Marine Oil Snow Sedimentation and Flocculent Accumulation) was a significant pathway for the distribution and fate of oil, accounting for as much as 14% of the total oil released. Long residence times of oil on the seafloor will result in prolonged exposure by benthic organisms and economically …


The Gut Of Geographically Disparate Ciona Intestinalis Harbors A Core Microbiota, Larry J. Dishaw, Jaime Flores-Torres, Simon Lax, Kristina Gemayel, Brittany Leigh, Daniela Melillo, M. Gail Mueller, Lenina Natale, Ivana Zucchetti, Rosaria De Santis, Maria Rosaria Pinto, Gary W. Litman, Jack W. Gilbert Apr 2014

The Gut Of Geographically Disparate Ciona Intestinalis Harbors A Core Microbiota, Larry J. Dishaw, Jaime Flores-Torres, Simon Lax, Kristina Gemayel, Brittany Leigh, Daniela Melillo, M. Gail Mueller, Lenina Natale, Ivana Zucchetti, Rosaria De Santis, Maria Rosaria Pinto, Gary W. Litman, Jack W. Gilbert

Marine Science Faculty Publications

It is now widely understood that all animals engage in complex interactions with bacteria (or microbes) throughout their various life stages. This ancient exchange can involve cooperation and has resulted in a wide range of evolved host-microbial interdependencies, including those observed in the gut. Ciona intestinalis, a filter-feeding basal chordate and classic developmental model that can be experimentally manipulated, is being employed to help define these relationships. Ciona larvae are first exposed internally to microbes upon the initiation of feeding in metamorphosed individuals; however, whether or not these microbes subsequently colonize the gut and whether or not Ciona forms …


Simulation Of Carbon-Nitrogen Cycling During Spring Upwelling In The Cariaco Basin, John J. Walsh, Dwight A. Dieterle, Frank E. Muller-Karger, Richard Bohrer, W. Paul Bissett, Ramon J. Varela, Ruben Aparicio, Rafael Diaz, Robert Thunell, Gordon T. Taylor, Mary I. Scranton, Kent A. Fanning, Edward T. Peltzer Apr 1999

Simulation Of Carbon-Nitrogen Cycling During Spring Upwelling In The Cariaco Basin, John J. Walsh, Dwight A. Dieterle, Frank E. Muller-Karger, Richard Bohrer, W. Paul Bissett, Ramon J. Varela, Ruben Aparicio, Rafael Diaz, Robert Thunell, Gordon T. Taylor, Mary I. Scranton, Kent A. Fanning, Edward T. Peltzer

Marine Science Faculty Publications

Coupled biological-physical models of carbon-nitrogen cycling by phytoplankton, zooplankton, and bacteria assess the impacts of nitrogen fixation and upwelled nitrate during new production within the shelf environs of the Cariaco Basin. During spring upwelling in response to a mean wind forcing of 8 m s(-1), the physical model matches remote-sensing and hydrographic estimates of surface temperature. Within the three-dimensional flow field, the steady solutions of the biological model of a simple food web of diatoms, adult calanoid copepods, and ammonifying/nitrifying bacteria approximate within similar to 9% the mean spring observations of settling fluxes caught by a sediment trap at similar …


Occurrence Of Lysogenic Bacteria In Marine Microbial Communities As Determined By Prophage Induction, Sunny C. Jiang, John H Paul Oct 1996

Occurrence Of Lysogenic Bacteria In Marine Microbial Communities As Determined By Prophage Induction, Sunny C. Jiang, John H Paul

Marine Science Faculty Publications

Viruses are abundant and dynamic members of the marine microbial community, and it is important to understand their role in the ecology of natural microbial populations. We have previously found lysogenic bacteria to be a significant proportion (43%) of the cultivable heterotrophic microbial population. As the majority of marine bacteria are not cultivable using standard plating methods, we measured the proportion of marine lysogenic bacteria in natural communities by prophage induction. Mitomycin C, UV radiation, sunlight, temperature and pressure were used to induce prophage in lysogenic bacteria from estuarine, coastal and oligotrophic offshore environments. To determine if hydrocarbon pollutants may …