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Biology

Theses and Dissertations

2020

Evolution

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Identifying Positive Selection In Multiple Subspecies Of Xylella Fastidiosa, Daniel Doroteo Flores Aug 2020

Identifying Positive Selection In Multiple Subspecies Of Xylella Fastidiosa, Daniel Doroteo Flores

Theses and Dissertations

For this study, we will be looking to identify positive selection in eight genomes of the bacterial plant pathogen Xylella fastidiosa. A previous study used a branching method that identified 2 genes with positive selection along with a site-specific method identifying 34 genes showing positive selection. This current study focused specifically on the site-specific method, resulting in 28 genes (of 1,039 tested) showing positive selection. Of the 28 genes showing positive selection, 12 of them come from the pathogenicity, virulence and cellular structural categories. The remaining genes are found in the biosynthesis, metabolism, macro metabolism, and cellular process categories. …


Characterization And Analysis Of The Avian Epidermal Differentiation Complex And Implications In Feather Evolution, Anthony Chastine Davis Jul 2020

Characterization And Analysis Of The Avian Epidermal Differentiation Complex And Implications In Feather Evolution, Anthony Chastine Davis

Theses and Dissertations

Since the most recent major mass-extinction event ~65 million years ago, birds have expanded to now occupy a wide range of habitats and exhibit diverse lifestyles. A major reason for this evolutionary success is the mechanical resilience and diversity of their epidermal appendages such as feathers, scales, and beaks. The diversity of these appendages, specifically feathers has played a critical role in their evolutionary success. The feathers of birds vary substantially across different species, as well as at different life stages and anatomical locations on an individual bird. Several of the genetic elements involved in the development and structure of …