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Dnagents: Genetically Engineered Intelligent Mobile Agents, Jeremy Otho Kackley 2010 University of Southern Mississippi

Dnagents: Genetically Engineered Intelligent Mobile Agents, Jeremy Otho Kackley

Dissertations

Mobile agents are a useful paradigm for network coding providing many advantages and disadvantages. Unfortunately, widespread adoption of mobile agents has been hampered by the disadvantages, which could be said to outweigh the advantages. There is a variety of ongoing work to address these issues, and this is discussed. Ultimately, genetic algorithms are selected as the most interesting potential avenue. Genetic algorithms have many potential benefits for mobile agents. The primary benefit is the potential for agents to become even more adaptive to situational changes in the environment and/or emergent security risks. There are secondary benefits such as the ...


An F4-Style Involutive Basis Algorithm, Miao Yu 2010 University of Southern Mississippi

An F4-Style Involutive Basis Algorithm, Miao Yu

Master's Theses

How to solve a linear equation system? The echelon form of this system will be obtained by Gaussian elimination then give us the solution. Similarly, Gröbner Basis is the “nice form” of nonlinear equation systems that can span all the polynomials in the given ideal [4]. So we can use Gröbner Basis to analyze the solution of a nonlinear equation system.

But how to compute a Gröbner Basis? There exist several ways to do it. Buchberger’s algorithm is the original method [2]. Gebauer-Möller algorithm [6] is a refined Buchberger’s algorithm. The F4 algorithm [5] uses matrix reduction to ...


Synthesis, Kinetic And Photocatalytic Studies Of Porphyrin-Ruthenium-Oxo Complexes, Yan Huang 2010 Western Kentucky University

Synthesis, Kinetic And Photocatalytic Studies Of Porphyrin-Ruthenium-Oxo Complexes, Yan Huang

Masters Theses & Specialist Projects

Macrocyclic ligand-complexed transition metal-oxo intermediates are the active oxidizing species in a variety of important biological and catalytic oxidation reactions. Many transition metal catalysts have been designed to mimic the predominant oxidation catalysts in Nature, namely the cytochrome P450 enzymes. Ruthenium porphyrin complexes have been the center of the research and have successfully been utilized, as catalysts, in major oxidation reactions such as the hydroxylation of alkanes. This study focuses on kinetic and photocatalytic studies of oxidation reactions with wellcharacterized high-valent ruthenium-oxo porphyrin complexes.
The trans-dioxoruthenium(VI) porphyrins have been among the best characterized metal-oxo intermediates and their involvement ...


Algal Biomass Accrual In Relation To Nutrient Availability Along A Longitudinal Gradient In The Upper Green River, Kentucky, Mary Douglas Penick 2010 Western Kentucky University

Algal Biomass Accrual In Relation To Nutrient Availability Along A Longitudinal Gradient In The Upper Green River, Kentucky, Mary Douglas Penick

Masters Theses & Specialist Projects

Nutrient limitation in aquatic ecosystems results from a deficiency in nitrogen or phosphorus levels relative to cellular growth needs. Nutrient limitation of freshwater systems is a function of biotic and abiotic factors. Biotic factors include vascular and nonvascular plant community composition. Abiotic factors include underlying bedrock and land-use activities (e.g. agriculture, septic systems). Nutrient availability directly affects growth, productivity, and community structure of primary producers. The purpose of this study was two-fold: (1) to assess the relationship between ambient algal biomass. and in-stream nutrient levels along the longitudinal course of a river through a transition from weak to well-developed ...


On-Metal Synthesis Of Some Aryl Substituted Rhenium Η5 Cyclopenta[C] Pyridazyl Complexes, Phenahas Gandu Sriramulu 2010 Western Kentucky University

On-Metal Synthesis Of Some Aryl Substituted Rhenium Η5 Cyclopenta[C] Pyridazyl Complexes, Phenahas Gandu Sriramulu

Masters Theses & Specialist Projects

Heterocyclic organic and organometallic compounds (e.g. polypyrrole) and their derivatives have been of great interest for conductive polymers due to their novel properties and environmental stability as compared to non-aromatic analogs (e.g. polyacetylene). We are interested in synthesizing organometallic pyridazines and rhenium pyridazyl complexes for polymer research. SeveraI5,6-fused ring pyridazines (1,2-CsH3(CRNH)(CRN) have been synthesized and characterized. Additionally, pyridazyl complexes of rhenium were synthesized in three steps beginning from fulvenes 1,2-CsH3(COHR)(COR). On-Metal synthesis and characterization of (Re(CO)3 {1,2- CSH3(CRN)(CRN)}] (R=C6RtOMe, C6RtCI, C4H30) and some off-metal pyridazines ...


Community Ecology Approaches To Amphibian Conservation, Joanna Hawley 2010 Clemson University

Community Ecology Approaches To Amphibian Conservation, Joanna Hawley

All Theses

Amphibian declines have been observed globally for several decades and populations continue to decline in many areas today. Through an extensive literature review of amphibian `impact studies,' I evaluated the use of multiple species, multiple spatial and temporal scales in an effort to ascertain a more complete, community-wide perspective on the causes of amphibian declines as well as management and conservation implications aimed at reversing these declines. Additionally, I performed multivariate analysis of an amphibian community dataset from southern Maine, USA using a multi-species and scalar approach to identify potentially important environmental variables associated with high levels of amphibian reproductive ...


Understanding The Role Of Electrostatics On Protein-Protein Binding, Rooplekha C mitra 2010 Clemson University

Understanding The Role Of Electrostatics On Protein-Protein Binding, Rooplekha C Mitra

All Theses


Ionized groups carry net charge and thus play a major role in the electrostatic interactions between the ligand and receptor. So understanding the role of electrostatics on protein-protein interactions is crucial for understanding the contribution of ionizable groups to the binding. However, their ionization states depend on many factors including pH of water phase. The complexity comes from the fact that the pKa's of ionizable groups may be quite different from their standard values and even may change due to protein-protein binding. The main difficulty in modeling plausible ionization changes induced by the complex formation arises from the differences ...


A Verifying Compiler For Embedded Networked Systems, Kalyan chakradhar Regula 2010 Clemson University

A Verifying Compiler For Embedded Networked Systems, Kalyan Chakradhar Regula

All Theses

Embedded networked devices are required to produce dependable outputs and communicate with peer devices given limited computing resources. These devices monitor and control processes within the physical world. They are used in applications related to environmental monitoring, telecommunications, social networking, and also life-critical applications in domains such as health care, aeronautics, and automotive manufacturing. For such applications, software errors can be costly - both in terms of nancial and human costs. Therefore, software programs installed on these devices must meet the appropriate requirements. To guarantee this, one must verify that the implemented code meets the corresponding specications. Manual trial-and-error validation of ...


Multiple Criteria Decision Analysis For The Selection Of A Land Use Impact Method For A Life Cycle Assessment Of Switchgrass As A Bioenergy Feedstock In The Pee Dee Region Of South Carolina, Joel Kohn 2010 Clemson University

Multiple Criteria Decision Analysis For The Selection Of A Land Use Impact Method For A Life Cycle Assessment Of Switchgrass As A Bioenergy Feedstock In The Pee Dee Region Of South Carolina, Joel Kohn

All Theses

The interactions of a growing human population and increasing demand for food and energy have led to governmental and social pressures encouraging the adoption of biofuels as a substitute for fossil energy sources; however, several potential biofuel feedstocks can compete directly with food products for valuable land area. Life Cycle Assessment (LCA) is a tool that examines the environmental impacts of a product or process and can assist decision makers in the development of policy. The environmental impacts of land use are not well incorporated into LCA. As an emerging field, there is no consensus regarding the best methods by ...


Parallel √3-Subdivision With Animation In Consideration Of Geometric Complexity, Stephen Cooney 2010 Clemson University

Parallel √3-Subdivision With Animation In Consideration Of Geometric Complexity, Stephen Cooney

All Theses

We look at the broader field of geometric subdivision and the emerging field of parallel computing for the purpose of creating higher visual fidelity at an efficient pace. Primarily, we present a parallel algorithm for √3-Subdivision. When considering animation, we find that it is possible to do subdivision by providing only one variable input, with the rest being considered static. This reduces the amount of data transfer required to continually update a subdividing mesh. We can support recursive subdivision by applying the technique in passes. As a basis for analysis, we look at performance in an OpenCL implementation that utilizes ...


Architectural Strategy For Digital Platforms: Technological And Organizational Perspectives, Jason WOODARD, Joel WEST 2010 Singapore Management University

Architectural Strategy For Digital Platforms: Technological And Organizational Perspectives, Jason Woodard, Joel West

Research Collection School Of Information Systems

different spatial queries such as kNN query, range query and CNN query. A comprehensive experimental study has been conducted to


Top Quark Pair And Single Top Production At Tevatron And Lhc Energies, Nikolaos Kidonakis 2010 Kennesaw State University

Top Quark Pair And Single Top Production At Tevatron And Lhc Energies, Nikolaos Kidonakis

Faculty Publications

I present the latest calculations of total and differential cross sections for top-antitop pair production and single top quark production via all main partonic channels. Higher-order corrections from the resummation of soft gluons are added through NNLL accuracy. Detailed numerical results are presented for approximate NNLO cross sections and top quark transverse momentum distributions at the Tevatron and LHC colliders.


Spatial Variations Of Crustal Characteristics Beneath The Hoggar Swell, Algeria, Revealed By Systematic Analyses Of Receiver Functions From A Single Seismic Station, Kelly H. Liu, Stephen S. Gao 2010 Missouri University of Science and Technology

Spatial Variations Of Crustal Characteristics Beneath The Hoggar Swell, Algeria, Revealed By Systematic Analyses Of Receiver Functions From A Single Seismic Station, Kelly H. Liu, Stephen S. Gao

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The Hoggar swell in Algeria is one of the significant massifs of northwest Africa. The paucity of high-resolution geophysical studies of the crust and mantle beneath the massifs is mostly responsible for the heated debates about the depth of the source region of the Cenozoic volcanism and the closely related uncertainty about the mechanism that formed and maintains the high elevation of the swells. Here we report results from a systematic study of 1386 high-quality receiver functions (RFs) recorded by station TAM, the only permanent broadband seismic station on the Hoggar swell. The resulting crustal thickness is about 34 km ...


Cfs Prediction Of Winter Persistent Inversions In The Intermountain Region, Robert R. Gillies, Shih-Yu (Simon) Wang, Jin Ho Yoon, Scott Weaver 2010 Utah State University

Cfs Prediction Of Winter Persistent Inversions In The Intermountain Region, Robert R. Gillies, Shih-Yu (Simon) Wang, Jin Ho Yoon, Scott Weaver

Plants, Soils, and Climate Faculty Publications

A recent study by Gillies and others of persistent inversion events in the Intermountain West of the United States found a substantive linkage between the intraseasonal oscillation (ISO) and the development of persistent inversion events. Given that NCEP’s Climate Forecast System (CFS) has demonstrated skill in the prediction of the ISO as far out as 1 month, it was decided to examine the CFS forecast’s capability in the prediction of such winter persistent inversions. After initial analysis, a simple regression scheme is proposed that is coupled to the CFS output of geopotential height as a way to predict ...


Contribution Of Membrane Elastic Energy To Rhodopsin Function, Olivier Soubias, Walter E. Teague, Kirk G. Hines, Drake C. Mitchell, Klaus Gawrisch 2010 Portland State University

Contribution Of Membrane Elastic Energy To Rhodopsin Function, Olivier Soubias, Walter E. Teague, Kirk G. Hines, Drake C. Mitchell, Klaus Gawrisch

Physics Faculty Publications and Presentations

We considered the issue of whether shifts in the metarhodopsin I (MI)-metarhodopsin II (MII) equilibrium from lipid composition are fully explicable by differences in bilayer curvature elastic stress. A series of six lipids with known spontaneous radii of monolayer curvature and bending elastic moduli were added at increasing concentrations to the matrix lipid 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and the MI-MII equilibrium measured by flash photolysis followed by recording UV-vis spectra. The average area-per-lipid molecule and the membrane hydrophobic thickness were derived from measurements of the 2H NMR order parameter profile of the palmitic acid chain in POPC. For the series of ...


On Usable Authentication For Wireless Body Area Networks, Cory Cornelius, David Kotz 2010 Dartmouth College

On Usable Authentication For Wireless Body Area Networks, Cory Cornelius, David Kotz

Open Dartmouth: Faculty Open Access Articles

We examine a specific security problem in wireless body area networks (WBANs), what we call the ıt one body authentication problem. That is, how can we ensure that the wireless sensors in a WBAN are collecting data about one individual and not several individuals. We explore existing solutions to this problem and provide some analysis why these solutions are inadequate. Finally, we provide some direction towards a promising solution to the problem and how it can be used to create a usably secure WBAN.


Is Bluetooth The Right Technology For Mhealth?, Shrirang Mare, David Kotz 2010 Dartmouth College

Is Bluetooth The Right Technology For Mhealth?, Shrirang Mare, David Kotz

Open Dartmouth: Faculty Open Access Articles

Many people believe mobile healthcare (mHealth) would help alleviate the rising cost of healthcare and improve the quality of service. Bluetooth, which is the most popular wireless technology for personal medical devices, is used for most of the mHealth sensing applications. In this paper we raise the question – Is Bluetooth the right technology for mHealth? To instigate the discussion we discuss some shortcomings of Bluetooth and also point out an alternative solution.


Can I Access Your Data? Privacy Management In Mhealth, Aarathi Prasad, David Kotz 2010 Dartmouth College

Can I Access Your Data? Privacy Management In Mhealth, Aarathi Prasad, David Kotz

Open Dartmouth: Faculty Open Access Articles

Mobile health (mHealth) has become important in the field of healthcare information technology, as patients begin to use mobile medical sensors to record their daily activities and vital signs. Since their medical data is collected by their sensors, the patients may wish to control data collection and distribution, so as to protect their data and share it only when the need arises. It must be possible for patients to grant or deny access to the data on the storage unit (mobile phones or personal health records (PHR)). Thus, an efficient framework is required for managing patient consent electronically, i.e ...


Photoreactive Crystalline Quasiracemates, Rebecca C. Grove, Steven H. Malehorn, Meghan E. Breen, Kraig A. Wheeler 2010 Eastern Illinois University

Photoreactive Crystalline Quasiracemates, Rebecca C. Grove, Steven H. Malehorn, Meghan E. Breen, Kraig A. Wheeler

Kraig A. Wheeler

Rationally designed racemic and quasiracemic sulfonamidecinnamic acids assemble to give hydrogen-bonded dimers with coplanar alignment of neighboring olefins. The quasiracemate phase contains near inversion-related motifs with chemically distinct components forming supramolecular heterodimers that undergo asymmetric photodimerization.


Photoreactive Crystalline Quasiracemates, Rebecca C. Grove, Steven H. Malehorn, Meghan E. Breen, Kraig A. Wheeler 2010 Eastern Illinois University

Photoreactive Crystalline Quasiracemates, Rebecca C. Grove, Steven H. Malehorn, Meghan E. Breen, Kraig A. Wheeler

Faculty Research and Creative Activity

Rationally designed racemic and quasiracemic sulfonamidecinnamic acids assemble to give hydrogen-bonded dimers with coplanar alignment of neighboring olefins. The quasiracemate phase contains near inversion-related motifs with chemically distinct components forming supramolecular heterodimers that undergo asymmetric photodimerization.


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