Other Earth Sciences Commons^™

Establishment And Partial Characterization Of A Cell Line From Burbot Lota Lota Maculosa: Susceptibility To Ihnv, Ipnv And Vhsv, Mark P. Polinski, John D. Drennan, William N. Batts, Susan C. Ireland, Kenneth D. Cain

USGS Staff -- Published Research

This study describes the development and partial characterization of a continuous fibroblastic-like cell line (BEF-1) developed from late stage embryos of North American burbot Lota lota maculosa. This cell line has been maintained for over 5 yr and 100 passages in vitro. Cells were cultured using Eagle’s minimum essential medium with Earle’s salts (MEM) supplemented with GlutaMAX ™, and 10% fetal bovine serum (FBS), pH 7.4. The addition of penicillin-streptomycinneomycin (PSN) antibiotic mixture (0.05, 0.05, 0.1 mg ml–1, respectively) did not negatively influence cell replication; however, the antimycotic Fungizone™ (2.5 μg ml–1, amphotericin B) caused cell rounding and …

Variations In Winter Surface High Pressure In The Northern Hemisphere And Climatological Impacts Of Diminishing Arctic Sea Ice, Kristen D. Fox

Dissertations & Theses in Earth and Atmospheric Sciences

This study explores the role Arctic sea ice plays in determining mean sea level pressure and 1000 hPa temperatures during Northern Hemisphere winters while focusing on an extended period of October to March. This is accomplished by investigating two regions of the same size and comparable climatic zones and elevations in the Northern Hemisphere. A breakdown of 29 years of reanalysis data into average monthly values, anomalies, trends, and comparisons between regions serves as current data to compare with a computer model control run. Ensuring the control run accurately models current atmospheric patterns, altering the model inputs to have no …

A Study Of The Sustainability Of Wild Capture Salmon In The Pacific Northwest, Justin D. Hansen

Social Sciences

No abstract provided.

Droughtscape- Spring 2010, Kelly Smith

Droughtscape, Quarterly Newsletter of NDMC, 2007-

NDMC and NC Drought Council Team Up

Drought to Intensify in Northwest and Hawaii

International Work

Impacts Recorded in Hawaii and Western States

U.S. Drought Monitor Archives Enhanced

Low-Water Impact Surveys Completed

K-12 Drought Outreach

Minimun Riparian Buffer Width For Maintaining Water Quality And Habitat Along Stevens Creek, Sammi Bray

Environmental Studies Undergraduate Student Theses

ABSTRACT Riparian buffer zones are important sites of biodiversity, sediment trapping, pollutant removal, and hydrologic regulation that have significant implications for both people and wildlife. Urbanization’s influence on and need for adequate water quality increases the need for careful planning in regards to riparian areas. Wildlife are key components in the ecosystem functions of riparian zones and require consideration in peri-urban planning as well. This study reviews relevant literature to determine the recommended minimum riparian buffer width for maintaining water quality and habitat along Stevens Creek in Lincoln, Nebraska. Only sources that listed a specific purpose related to water quality …

Relatin Dissolved Oxygen Concentration To Fish Distribution In Jarecki Lake, Adam Sutton

Environmental Studies Undergraduate Student Theses

Abstract Water temperature and dissolved oxygen (DO) profiles were measured once every month from mid July to mid February in a relatively deep sand-pit lake in southeast Nebraska. These profiles showed depleted DO concentrations below the thermocline during summer stratification indicating areas fish will likely avoid in summer months. Colder temperatures in fall caused complete mixing of the water column allowing fish to inhabit all depths of the lake. An inverse temperature stratification occurred directly below the ice during winter months as ice cover cooled the surface water to below 4 degrees Celsius. Ice cover also blocked air – water …

Comparison Of Different Aproaches To Extract Heterogeneous Objects From An Image Using An Orchards Example, Przemysław Kupidura, Gwadera Łukasz

Przemysław Kupidura

Traditional, pixel-based classification is very often an useless tool for an automatic extraction of heterogeneous types of land cover. This paper presents the application of mathematical morphology for a semi-automatic extraction of heterogenous objects using an example of orchards. Thanks to this algorithm it is possible to obtain orchards pixels of unique set of digital numbers, allowing succesful application of a traditional pixel-based classification for extraction of this class.The algorithm concerning a sequence of morphological operations of multispectral satellite images of very high resolution (VHR) is then veryfied on test images. The paper concerns also a comparison of an efficiency …

Semi-Automatic Method For A Built-Up Area Intensity Survey Using Morphological Granulometry, Przemysław Kupidura

Przemysław Kupidura

Built-up areas as a land-use type are easy to extract in a visual photo-interpretation process, however their heterogeneous character makes theirs automatic or semi-automatic extraction very complicated, even impossible using non-contextual, pixel-based methods of image classification. This paper concerns the application of the semi-automatic method of the extraction of built-up areas in satellite images. Granulometric maps, a mathematical morphology operator is used as a main tool for surveying a heterogeneity of particular parts of an aerial or satellite image. This function measures amount and size of objects in the determined neighborhood of each pixel of an image. Pixels representing built-up …

Correlation Between Normalized Difference Vegetation Index And Malaria In A Subtropical Rain Forest Undergoing Rapid Anthropogenic Alteration, Nicole M. Wayant, Diego Maldonado, Antonieta Rojas De Arias, Blanca Cousino, Douglas G. Goodin

Center for Advanced Land Management Information Technologies--Publications

Time-series of coarse-resolution greenness values derived through remote sensing have been used as a surrogate environmental variable to help monitor and predict occurrences of a number of vector-borne and zoonotic diseases, including malaria. Often, relationships between a remotely-sensed index of greenness, e.g. the normalized difference vegetation index (NDVI), and disease occurrence are established using temporal correlation analysis. However, the strength of these correlations can vary depending on type and change of land cover during the period of record as well as inter-annual variations in the climate drivers (precipitation, temperature) that control the NDVI values. In this paper, the correlation between …

Droughtscape- Winter 2010, Kelly Smith

Droughtscape, Quarterly Newsletter of NDMC, 2007-

USDM Forum Highlights

Drought Likely to Ease

Research Shows Birds Vulnerable to Drought

Drought Recedes in 2009

CA, TX Suffer Impacts from Ongoing Drought

NDMC Wishes Ryu Well

Conferees Pick SPI for Global Drought Index

Managing Drought Risk On The Ranch: A Planning Guide For Great Plains Ranchers, University Of Nebraska - Lincoln National Drought Mitigation Center

Publications of the National Drought Mitigation Center

TABLE OF CONTENTS

WHY PLAN FOR DROUGHT?......... 3

UNDERSTANDING DROUGHT........... 6

THE RANCH DROUGHT PLAN........... 9

COMMUNICATION AND PLANNING PARTNERS............ 10

RANCH VISION AND OBJECTIVES............. 11

SWOT ANALYSIS............... 12

INVENTORY OF RANCH RESOURCES................ 13

CRITICAL DATES AND TARGET POINTS................. 15

MONITORING PLAN AND SCHEDULE.................... 19

EVALUATE DROUGHT MANAGEMENT STRATEGIES............ 20

IMPLEMENT AND MONITOR THE DROUGHT PLAN............ 29

WORKSHEETS........... 30

Paleogeographic, Paleoceanographic, And Tectonic Controls On Early Late Ordovician Graptolite Diversity Patterns, Daniel Goldman, Shuang-Ye Wu

Geology Faculty Publications

The Katian Age (early Late Ordovician) was a time of significant decline in marine biodiversity, but whether this decline was a real phenomenon or an artifact of the relatively few studies devoted to this interval requires further research. We examined the pattern of graptolite faunal changes across the boundary between the Climacograptus bicornis and Diplacanthograptus caudatus graptolite zones in North America and on several other continents.

A sharp decline in species diversity occurs in the Appalachian Basin. Scores for normalized diversity dropped from 20 in the C. bicornis Zone to 7 in the D. caudatus Zone. Only 11% of the …

Regional Vs. Local Impact Of Wind On Glaciers In The Andes Mountains, Derek Ferris

Undergraduate Review

Northern Peru will face critical water resource issues in the near future as permanent ice in the Andes Mountains continues to rapidly melt. Ironically, the melt-water from these glaciers supports the culture of 100s of thousands of people living at lower elevations, particularly during the dry season, and predictions suggest some glaciers may be gone in less than 100 years. The impact of local warming of “U” shaped valleys running down the dryer western slope of the Andes range is largely disregarded in current climate model predictions because of the complexity of simulating the complex topography. Studies that compare the …

Subspecies Status And Population Genetic Structure In Piping Plover (Charadrius Melodus), Mark P. Miller, Susan M. Haig, Cheri L. Gratto-Trevor, Thomas D. Mullins

USGS Staff -- Published Research

Piping Plover (Charadrius melodus) is a migratory shorebird that is listed as endangered in Canada and the U.S. Great Lakes and as threatened throughout the rest of its breeding and winter range. We undertook a comprehensive molecular-genetic investigation to (1) address subspecific taxonomy, (2) characterize population genetic structure, and (3) infer past bottlenecks and demographic processes in this species. Analyses included individuals from 23 U.S. states and Canadian provinces and were based on mitochondrial DNA sequences (580 base pairs, n = 245) and 8 nuclear microsatellite loci (n = 229). Our findings provide support for separate Atlantic and …

Barcoding Bushmeat: Molecular Identification Of Central African And South American Harvested Vertebrates, Mitchell J. Eaton, Greta J. Meyers, Sergios-Orestis Kolokotronis, Matthew S. Leslie, Andrew P. Martin, George Amato

USGS Staff -- Published Research

The creation and use of a globally available database of DNA sequences from a standardized gene region has been proposed as a tool for species identification, assessing genetic diversity and monitoring the legal and illegal trade in wildlife species. Here, we contribute to the Barcode of Life Data System and test whether a short region of the mitochondrial cytochrome c oxidase subunit 1 (COX1) gene would reliably distinguish among a suite of commonly hunted African and South American mammal and reptile species. We used universal primers to generate reference barcode sequences of 645 bp for 23 species from five vertebrate …

Absorption And Biotransformation Of Polybrominated Diphenyl Ethers De-71 And De-79 In Chicken (Gallus Gallus), Mallard (Anas Platyrhynchos), American Kestrel (Falco Sparverius) And Black-Crowned Night-Heron (Nycticorax Nycticorax) Eggs, Moira A. Mckernan, Barnett A. Rattner, Jeff S. Hatfield, Robert C. Hale, Mary Ann Ottinger

USGS Staff -- Published Research

We recently reported that air cell administration of penta-brominated diphenyl ether (penta-BDE; DE-71) evokes biochemical and immunologic effects in chicken (Gallus gallus) embryos at very low doses, and impairs pipping (i.e., stage immediately prior to hatching) and hatching success at 1.8 µg g^-1 egg (actual dose absorbed) in American kestrels (Falco sparverius). In the present study, absorption of polybrominated diphenyl ether (PBDE) congeners was measured following air cell administration of a penta-BDE mixture (11.1 lg DE-71 g^-1 egg) or an octa-brominated diphenyl ether mixture (octa BDE; DE-79; 15.4 lg DE-79 g^{- …}

Tree-Ring Dates And Demographic Change In The Southern Colorado Plateau And Rio Grande Regions, Michael S. Berry, Larry Benson

USGS Staff -- Published Research

In this chapter, tree-ring dates from the southern Colorado Plateau, Mogollon Highlands, and Rio Grande areas (fig. 3-1) (hereafter referred to as the study area) are used to estimate regional-scale timber-harvesting and construction activities between AD 600 and 1600 (the Basketmaker III through Pueblo IV periods). Within that time span, we focus our attention particularly on the AD 1045-1300 period, a time when anomalously wet periods alternated with megadroughts (fig. 3.2). Treering- date distributions (histograms) for eight archaeological subregions within the study area have been created using a database of more than twenty-four thousand tree-ring dates from archaeological sites. These …

Evidence For Recent Population Bottlenecks In Northern Spotted Owls (Strix Occidentalis Caurina), W. Chris Funk, Eric D. Forsman, Matthew Johnson, Thomas D. Mullins, Susan M. Haig

USGS Staff -- Published Research

The northern spotted owl (Strix occidentalis caurina) is one of the most controversial threatened subspecies ever listed under the US Endangered Species Act. Despite protection of its remaining forest habitat, recent field studies show continued declines of northern spotted owls. One potential threat to northern spotted owls which has not yet been shown is loss of genetic variation from population bottlenecks. Bottlenecks can increase the probability of mating among related individuals, potentially causing inbreeding depression, and can decrease adaptive potential. Here we report evidence for recent bottlenecks in northern spotted owls using a large genetic dataset (352 individuals …

The Cleaning Of Burned And Contaminated Archaeological Maize Prior To 87sr/86sr Analysis, L.V. Benson, H. E. Taylor, T. I. Plowman, D. A. Roth, R. C. Antweiler

USGS Staff -- Published Research

Accurate trace-metal and strontium-isotope analyses of archaeological corn cobs require that metal contaminants be removed prior to chemical analysis. Archaeological cobs are often coated with construction debris, dust, or soilwhich contains mineral particles. In addition, most archaeological cobs are partially or completely burned and the burned parts incorporate mineral debris in their hardened residual structures. Unburned cobs are weak ion exchangers and most metals within a cob are not firmly bound to cob organic matter; therefore, immersing cobs in acids and rinsing them in deionized water to remove mineral contaminants may result in the undesirable loss of metals, including strontium, …

Barcoding Bushmeat: Molecular Identification Of Central African And South American Harvested Vertebrates, Mitchell J. Eaton, Greta L. Meyers, Sergios-Orestis Kolokotronis, Matthew S. Leslie, Andrew P. Martin, George Amato

USGS Staff -- Published Research

The creation and use of a globally available database of DNA sequences from a standardized gene region has been proposed as a tool for species identification, assessing genetic diversity and monitoring the legal and illegal trade in wildlife species. Here, we contribute to the Barcode of Life Data System and test whether a short region of the mitochondrial cytochrome c oxidase subunit 1 (COX1) gene would reliably distinguish among a suite of commonly hunted African and South American mammal and reptile species. We used universal primers to generate reference barcode sequences of 645 bp for 23 species from five vertebrate …