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Full-Text Articles in Physics
Hill Functions For Stochastic Gene Regulatory Networks From Master Equations With Split Nodes And Time-Scale Separation, Ovidiu Lipan, Cameron Ferwerda
Hill Functions For Stochastic Gene Regulatory Networks From Master Equations With Split Nodes And Time-Scale Separation, Ovidiu Lipan, Cameron Ferwerda
Physics Faculty Publications
The deterministic Hill function depends only on the average values of molecule numbers. To account for the fluctuations in the molecule numbers, the argument of the Hill function needs to contain the means, the standard deviations, and the correlations. Here we present a method that allows for stochastic Hill functions to be constructed from the dynamical evolution of stochastic biocircuits with specific topologies. These stochastic Hill functions are presented in a closed analytical form so that they can be easily incorporated in models for large genetic regulatory networks. Using a repressive biocircuit as an example, we show by Monte Carlo …
Surface Impedance And Optimum Surface Resistance Of A Superconductor With An Imperfect Surface, Alex Gurevich, Takayuki Kubo
Surface Impedance And Optimum Surface Resistance Of A Superconductor With An Imperfect Surface, Alex Gurevich, Takayuki Kubo
Physics Faculty Publications
We calculate a low-frequency surface impedance of a dirty, s-wave superconductor with an imperfect surface incorporating either a thin layer with a reduced pairing constant or a thin, proximity-coupled normal layer. Such structures model realistic surfaces of superconducting materials which can contain oxide layers, absorbed impurities, or nonstoichiometric composition. We solved the Usadel equations self-consistently and obtained spatial distributions of the order parameter and the quasiparticle density of states which then were used to calculate a low-frequency surface resistance Rs (T) and the magnetic penetration depth λ(T) as functions of temperature in the limit of local London electrodynamics. It …
Nonperturbative Evolution Of Parton Quasi-Distributions, A. V. Radyushkin
Nonperturbative Evolution Of Parton Quasi-Distributions, A. V. Radyushkin
Physics Faculty Publications
Using the formalism of parton virtuality distribution functions (VDFs) we establish a connection between the transverse momentum dependent distributions (TMDs) F(x,k2⊥) and quasi-distributions (PQDs) Q(y,p3) introduced recently by X. Ji for lattice QCD extraction of parton distributions f(x). We build models for PQDs from the VDF-based models for soft TMDs, and analyze the p3 dependence of the resulting PQDs. We observe a strong nonperturbative evolution of PQDs for small and moderately large values of p3 reflecting the transverse momentum dependence of TMDs. Thus, the study of PQDs on the lattice …
"Hammer" Events, Neutrino Energies, And Nucleon-Nucleon Correlations, L. B. Weinstein, O. Hen, Eli Piasetzky
"Hammer" Events, Neutrino Energies, And Nucleon-Nucleon Correlations, L. B. Weinstein, O. Hen, Eli Piasetzky
Physics Faculty Publications
Background: Accelerator-based neutrino oscillation measurements depend on observing a difference between the expected and measured rate of neutrino-nucleus interactions at different neutrino energies or different distances from the neutrino source. Neutrino-nucleus scattering cross sections are complicated and depend on the neutrino beam energy, the neutrino-nucleus interaction, and the structure of the nucleus. Knowledge of the incident neutrino energy spectrum and neutrino-detector interactions are crucial for analyzing neutrino oscillation experiments. The ArgoNeut liquid argon time projection chamber (lArTPC) observed charged-current neutrino-argon scattering events with two protons back-to-back in the final state ("hammer" events) which they associated with short-range correlated (SRC) nucleon-nucleon …
Issues And Opportunities In Exotic Hadrons, R.A. Briceño, T. D. Cohen, S. Coito, J. J. Dudek, E. Eichten, R. E. Mitchell
Issues And Opportunities In Exotic Hadrons, R.A. Briceño, T. D. Cohen, S. Coito, J. J. Dudek, E. Eichten, R. E. Mitchell
Physics Faculty Publications
The last few years have been witness to a proliferation of new results concerning heavy exotic hadrons. Experimentally, many new signals have been discovered that could be pointing towards the existence of tetraquarks, pentaquarks, and other exotic configurations of quarks and gluons. Theoretically, advances in lattice field theory techniques place us at the cusp of understanding complex coupled-channel phenomena, modelling grows more sophisticated, and effective field theories are being applied to an ever greater range of situations. It is thus an opportune time to evaluate the status of the field. In the following, a series of high priority experimental and …
Fragmentation Of Fast Josephson Vortices And Breakdown Of Ordered States By Moving Topological Defects, Ahmad Sheikhzada, Alex Gurevich
Fragmentation Of Fast Josephson Vortices And Breakdown Of Ordered States By Moving Topological Defects, Ahmad Sheikhzada, Alex Gurevich
Physics Faculty Publications
Topological defects such as vortices, dislocations or domain walls define many important effects in superconductivity, superfluidity, magnetism, liquid crystals, and plasticity of solids. Here we address the breakdown of the topologically-protected stability of such defects driven by strong external forces. We focus on Josephson vortices that appear at planar weak links of suppressed superconductivity which have attracted much attention for electronic applications, new sources of THz radiation, and low-dissipative computing. Our numerical simulations show that a rapidly moving vortex driven by a constant current becomes unstable with respect to generation of vortex-antivortex pairs caused by Cherenkov radiation. As a result, …
Separated Response Functions In Exclusive, Forward Π± Electroproduction On Deuterium, G. M. Huber, H. P. Blok, A. Klein, L. M. Qin, K. Vansyoc, Jefferson Lab, Fπ Collaboration
Separated Response Functions In Exclusive, Forward Π± Electroproduction On Deuterium, G. M. Huber, H. P. Blok, A. Klein, L. M. Qin, K. Vansyoc, Jefferson Lab, Fπ Collaboration
Physics Faculty Publications
Background: Measurements of forward exclusive meson production at different squared four-momenta of the exchanged virtual photon, Q2, and at different four-momentum transfer, t, can be used to probe QCD's transition from meson-nucleon degrees of freedom at long distances to quark-gluon degrees of freedom at short scales. Ratios of separated response functions in π- and π+ electroproduction are particularly informative. The ratio for transverse photons may allow this transition to be more easily observed, while the ratio for longitudinal photons provides a crucial verification of the assumed pole dominance, needed for reliable extraction of the pion form …
Energy Dependence Of Moments Of Net-Proton Multiplicity Distributions At Rhic, L. Adamczyk, J. K. Adkins, S. Bültmann, I. Koralt, D. Plyku, Star Collaboration
Energy Dependence Of Moments Of Net-Proton Multiplicity Distributions At Rhic, L. Adamczyk, J. K. Adkins, S. Bültmann, I. Koralt, D. Plyku, Star Collaboration
Physics Faculty Publications
We report the beam energy (√ˢᴺᴺ = 7.7-200 GeV) and collision centrality dependence of the mean (M), standard deviation (σ), skewness (S), and kurtosis (κ) of the net-proton multiplicity distributions in Au + Au collisions. The measurements are carried out by the STAR experiment at midrapidity (|y| < 0.5) and within the transverse momentum range 0.4 < pT < 0.8 GeV/c in the first phase of the Beam Energy Scan program at the Relativistic Heavy Ion Collider. These measurements are important for understanding the quantum chromodynamic phase diagram. The products of the moments, Sσ and Kσ2, are sensitive to the correlation length of the hot and dense medium created in the collisions and are related to the ratios of baryon number susceptibilities of corresponding orders. The products of moments are found to have values significantly below the Skellam expectation and close to expectations based on independent …
Anomalous Centrality Evolution Of Two-Particle Angular Correlations From Au-Au Collisions At √ˢᴺᴺ = 62 And 200 Gev, G. Agakishiev, M. M. Aggarwal, S. Bueltmann, I. Koralt, D. Plyku, Star Collaboration
Anomalous Centrality Evolution Of Two-Particle Angular Correlations From Au-Au Collisions At √ˢᴺᴺ = 62 And 200 Gev, G. Agakishiev, M. M. Aggarwal, S. Bueltmann, I. Koralt, D. Plyku, Star Collaboration
Physics Faculty Publications
We present two-dimensional (2D) two-particle angular correlations measured with the STAR detector on relative pseudorapidity η and ϕ for charged particles from Au-Au collisions at √ˢᴺᴺ = 62 and 200 GeV with transverse momentum pt ≥ 0.15 GeV/c, │η│ ≤ 1, and 2 π in azimuth. Observed correlations include a same-side (relative azimuth <π/2) 2D peak, a closely related away-side azimuth dipole, and an azimuth quadrupole conventionally associated with elliptic flow. The same-side 2D peak and away-side dipole are explained by semihard parton scattering and fragmentation (minijets) in proton-proton and peripheral nucleus-nucleus collisions. Those structures follow N-N binary-collision scaling in Au-Au collisions until midcentrality, where a transition to a qualitatively different centrality trend occurs within one 10% centrality bin. Above the transition point the number of same-side and away-side correlated pairs increases rapidly relative to binary-collision scaling, the η width of the same-side 2D peak also increases rapidly (η elongation), and the ϕ width actually decreases significantly. Those centrality trends are in marked contrast with conventional expectations for jet quenching in a dense medium. The observed centrality trends are compared to perturbative QCD predictions computed in HIJING, which serve as a theoretical baseline, and to the expected trends for semihard parton scattering and fragmentation in a thermalized opaque medium predicted by theoretical calculations and phenomenological models. We are unable to reconcile a semihard parton scattering and fragmentation origin for the observed correlation structure and centrality trends with heavy-ion collision scenarios that invoke rapid parton thermalization. If the collision system turns out to be effectively opaque to few-GeV partons the present observations would be inconsistent with the minijet picture discussed here.
Measurement Of The Differential Cross Section For The Reaction Γn →Π⁻P From Deuterium, M. J. Amaryan, H. Badasaryan, S. L. Careccia, G. E. Dodge, C. E. Hyde, S. E. Kuhn, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Zhang, Et Al., The Clas Collaboration
Measurement Of The Differential Cross Section For The Reaction Γn →Π⁻P From Deuterium, M. J. Amaryan, H. Badasaryan, S. L. Careccia, G. E. Dodge, C. E. Hyde, S. E. Kuhn, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Zhang, Et Al., The Clas Collaboration
Physics Faculty Publications
We report a measurement of the differential cross section for the γn →π⁻p process from the CLAS detector at Jefferson Laboratory in Hall B for photon energies between 1.0 and 3.5 GeV and pion center-of-mass (c.m.) angles (𝜃 c.m.) between 50° and 115°. We confirm a previous indication of a broad enhancement around a c.m. energy (√ s) of 2.1 GeV at 𝜃c.m. = 90° in the scaled differential cross section s7 dσdt and a rapid falloff in a center-of-mass energy region of about 400 MeV following the enhancement. Our data show an angular dependence of …
Electroproduction Of P Π⁺Π⁻ Off Protons At 0.2 < Q² < 0.6 Gev² And 1.3 < W < 1.57 Gev With The Clas Detector, M. J. Amaryan, H. Baghdasaryan, M. Bektasoglu, S. Bültmann, S. L. Careccia, G. E. Dodge, G. Gavalian, N. Guler, C. E. Hyde, W. Kim, A. Klein, F. J. Klein, A. Klimenko, S. E. Kuhn, S. Tkachenko, L. B. Weinstein, Et Al., Clas Collaboration
Electroproduction Of P Π⁺Π⁻ Off Protons At 0.2 < Q² < 0.6 Gev² And 1.3 < W < 1.57 Gev With The Clas Detector, M. J. Amaryan, H. Baghdasaryan, M. Bektasoglu, S. Bültmann, S. L. Careccia, G. E. Dodge, G. Gavalian, N. Guler, C. E. Hyde, W. Kim, A. Klein, F. J. Klein, A. Klimenko, S. E. Kuhn, S. Tkachenko, L. B. Weinstein, Et Al., Clas Collaboration
Physics Faculty Publications
This paper reports on the most comprehensive data set obtained on differential and fully integrated cross sections for the process ep → e'pπ+π-. The data were collected with the CLAS detector at Jefferson Laboratory. Measurements were carried out in the as yet unexplored kinematic region of photon virtuality 0.2 < Q2 < 0.6 GeV2 and invariant mass of the final hadron system W from 1.3 to 1.57 GeV. For the first time, nine independent one-fold differential cross sections were determined in each bin of W and Q2 covered by the measurements. A phenomenological analysis of the data allowed …
Cross Sections And Beam Asymmetries For E ⃗ P → Enπ+ In The Nucleon Resonance Region For 1.7 ⩽ Q2 ⩽ 4.5 Gev2, M. J. Amaryan, H. Bagdasaryan, S. Bültmann, K. V. Dharmawardane, G. E. Dodge, G. Gavalian, N. Guler, C. E. Hyde-Wright, N. Kalantarians, A. Klein, A. V. Klimenko, S. E. Kuhn, J. Lachniet, R. A. Niyazov, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Zhang, Et Al., The Clas Collaboration
Cross Sections And Beam Asymmetries For E ⃗ P → Enπ+ In The Nucleon Resonance Region For 1.7 ⩽ Q2 ⩽ 4.5 Gev2, M. J. Amaryan, H. Bagdasaryan, S. Bültmann, K. V. Dharmawardane, G. E. Dodge, G. Gavalian, N. Guler, C. E. Hyde-Wright, N. Kalantarians, A. Klein, A. V. Klimenko, S. E. Kuhn, J. Lachniet, R. A. Niyazov, F. Sabatié, S. Tkachenko, L. B. Weinstein, J. Zhang, Et Al., The Clas Collaboration
Physics Faculty Publications
The exclusive electroproduction process e ⃗ p → e'nπ+ was measured in the range of the photon virtuality Q2 =1.7-4.5 GeV2, and the invariant mass range for the n π+ system of W=1.15-1.7 GeV using the CEBAF Large Acceptance Spectrometer. For the first time, these kinematics are probed in exclusive π+ production from protons with nearly full coverage in the azimuthal and polar angles of the nπ+ center-of-mass system. The nπ+ channel has particular sensitivity to the isospin 1/2 excited nucleon states, and together with the pπ0 final state will serve …
Plasma Emission Redistribution In A Single Cylce Of A Pulsed Dc Magnetron, W. Zhu, G. Buyle, J. Lopez, S. Shanmugmurthy, A. Belkind, K. Becker, R. De Gryse
Plasma Emission Redistribution In A Single Cylce Of A Pulsed Dc Magnetron, W. Zhu, G. Buyle, J. Lopez, S. Shanmugmurthy, A. Belkind, K. Becker, R. De Gryse
Physics Faculty Publications
Time-resolved images of the optical emissions from a pulsed dc titanium target planar rectangular sputtering magnetron plasma were taken using Argon spectral filters and a Roper Scientific ICCD camera with a time resolution of 0.05-0.2 μs. At the beginning of the 'on-time', when the power is turned on, the discharge initially starts preferentially in two opposite curved sections ('cross corners') of the magnetron race track, where it exhibits the most intense plasma emissions. During the rest of the 'on-time', the emissions from the straight sections of the race track of the magnetron are always slightly more intense than the emissions …
Complete Angular Distribution Measurements Of Two-Body Deuteron Photodisintegration Between 0.5 And 3 Gev, H. Bagdasaryan, H. Bektasoglu, G. E. Dodge, T. A. Forest, C. E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, F. Sabatié, S. Stepanyan, L. B. Weinstein, J. Yun, Et Al., The Clas Collaboration
Complete Angular Distribution Measurements Of Two-Body Deuteron Photodisintegration Between 0.5 And 3 Gev, H. Bagdasaryan, H. Bektasoglu, G. E. Dodge, T. A. Forest, C. E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, F. Sabatié, S. Stepanyan, L. B. Weinstein, J. Yun, Et Al., The Clas Collaboration
Physics Faculty Publications
Nearly complete angular distributions of the two-body deuteron photodisintegration differential cross section have been measured using the CEBAF Large Acceptance Spectrometer detector and the tagged photon beam at the Thomas Jefferson National Accelerator Facility. The data cover photon energies between 0.5 and 3.0 GeV and center-of-mass proton scattering angles 10°–160°. The data show a persistent forward-backward angle asymmetry over the explored energy range, and are well described by the nonperturbative quark gluon string model.
Ep → Ep Π⁰ Reaction Studied In The Δ(1232) Mass Region Using Polarization Asymmetries, M. Bektasoglu, L. Ciciani, K.V. Dharmawardane, G. E. Dodge, T.A. Forest, C.E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, S. Stepanyan, L. B. Weinstein, Et Al., Clas Collaboration
Ep → Ep Π⁰ Reaction Studied In The Δ(1232) Mass Region Using Polarization Asymmetries, M. Bektasoglu, L. Ciciani, K.V. Dharmawardane, G. E. Dodge, T.A. Forest, C.E. Hyde-Wright, A. Klein, A. V. Klimenko, S. E. Kuhn, S. Stepanyan, L. B. Weinstein, Et Al., Clas Collaboration
Physics Faculty Publications
Measurements of the angular distributions of target and double-spin asymmetries for the Δ+(1232) in the exclusive channel → p(→e,e'p)π0 obtained at the Jefferson Lab in the Q2 range from 0.5 to 1.5 GeV2/c2 are presented. Results of the asymmetries are compared with the unitary isobar model [D. Drechsel , Nucl. Phys. A645, 145 (1999)], dynamical models [T. Sato and T. S. Lee, Phys. Rev. C 54, 2660 (1996); S. S. Kamalov , Phys. Lett. B 27, 522 (2001)], and the effective Lagrangian theory [R. M. Davidson , Phys. Rev. …
First Measurement Of Transferred Polarization In The Exclusive →E P → E'K+ →Λ, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, C. E. Hyde-Wright, A. V. Klimenko, S. E. Kuhn, R. A. Niyazov, L. M. Qin, L. B. Weinstein, J. Yun
First Measurement Of Transferred Polarization In The Exclusive →E P → E'K+ →Λ, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, T. A. Forest, C. E. Hyde-Wright, A. V. Klimenko, S. E. Kuhn, R. A. Niyazov, L. M. Qin, L. B. Weinstein, J. Yun
Physics Faculty Publications
The first measurements of the transferred polarization for the exclusive →ep → e'K+ →Λ over right arrow reaction have been performed at Jefferson Laboratory using the CLAS spectrometer. A 2.567 GeV beam was used to measure the hyperon polarization over Q2 from 0.3 to 1.5 (GeV/c)2, W from 1.6 to 2.15 GeV, and over the full K+ center-of-mass angular range. Comparison with predictions of hadrodynamic models indicates strong sensitivity to the underlying resonance contributions. A nonrelativistic quark-model interpretation of our data suggests that the s -s quark pair is produced with spins predominantly …
Η Photoproduction On The Proton For Photon Energies From 0.75 To 1.95 Gev, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, C. E. Hyde-Wright, A. Klein, S. E. Kuhn, S. Stepanyan, J. Yun, Et Al., Clas Collaboration
Η Photoproduction On The Proton For Photon Energies From 0.75 To 1.95 Gev, M. Bektasoglu, K. V. Dharmawardane, G. E. Dodge, C. E. Hyde-Wright, A. Klein, S. E. Kuhn, S. Stepanyan, J. Yun, Et Al., Clas Collaboration
Physics Faculty Publications
Differential cross sections for γp→ηp have been measured with tagged real photons for incident photon energies from 0.75 to 1.95 GeV. Mesons were identified by missing mass reconstruction using kinematical information for protons scattered in the production process. The data provide the first extensive angular distribution measurements for the process above W = 1.75 GeV. Comparison with preliminary results from a constituent quark model support the suggestion that a third S11 resonance with mass ∼1.8 GeV couples to the ηN channel.
Two-Body Photodisintegration Of The Deuteron Up To 2.8 Gev, J. E. Belz, D. H. Potterveld, S. E. Kuhn, J.F. J. Van Den Brand, J. L. White, B. Zeidman, Et Al.
Two-Body Photodisintegration Of The Deuteron Up To 2.8 Gev, J. E. Belz, D. H. Potterveld, S. E. Kuhn, J.F. J. Van Den Brand, J. L. White, B. Zeidman, Et Al.
Physics Faculty Publications
Measurements were performed for the photodisintegration cross section of the deuteron for photon energies from 1.6 to 2.8 GeV and center-of-mass angles from 37° to 90°. The measured energy dependence of the cross section at θc.m. = 90° is in agreement with the constituent counting rules.
A-Dependence Of Nuclear Transparency In Quasielastic A (E, E'P) At High Q², T. G. O'Neill, W. Lorenzon, P. Anthony, R. G. Arnold, J. Arrington, E. J. Beise, J. E. Belz, P. E. Bosted, H.- J. Bulten, M. S. Chapman, K. P. Coulter, F. Dietrich, R. Ent, M. Epstein, B. W. Filippone, H. Gao, R. A. Gearhart, D. F. Geesaman, J.- O. Hansen, R. J. Holt, H. E. Jackson, C. E. Jones, C. E. Keppel, E. R. Kinney, S. Kuhn, K. Lee, A. Lung, N.C.R. Makins, D.J. Margaziotis, R. D. Mckeown, R. G. Milner, B. Mueller, J. Napolitano, J. Nelson, V. Papavassiliou, G. G. Petratos, D. H. Potterveld, S. E. Rock, M. Spengos, Z. M. Szalata, L. H. Tao, K. Van Bibber, J.F.J. Van Den Brand, J. L. White, B. Zeidman
A-Dependence Of Nuclear Transparency In Quasielastic A (E, E'P) At High Q², T. G. O'Neill, W. Lorenzon, P. Anthony, R. G. Arnold, J. Arrington, E. J. Beise, J. E. Belz, P. E. Bosted, H.- J. Bulten, M. S. Chapman, K. P. Coulter, F. Dietrich, R. Ent, M. Epstein, B. W. Filippone, H. Gao, R. A. Gearhart, D. F. Geesaman, J.- O. Hansen, R. J. Holt, H. E. Jackson, C. E. Jones, C. E. Keppel, E. R. Kinney, S. Kuhn, K. Lee, A. Lung, N.C.R. Makins, D.J. Margaziotis, R. D. Mckeown, R. G. Milner, B. Mueller, J. Napolitano, J. Nelson, V. Papavassiliou, G. G. Petratos, D. H. Potterveld, S. E. Rock, M. Spengos, Z. M. Szalata, L. H. Tao, K. Van Bibber, J.F.J. Van Den Brand, J. L. White, B. Zeidman
Physics Faculty Publications
The A-dependence of the quasielastic A(e, ef'p) reaction has been studied at SLAC with 2H, C, Fe, and Au nuclei at momentum transfers Q2 = 1, 3, 5, and 6.8 (GeV/c)2. We extract the nuclear transparency T(A, Q2), a measure of the average probability that the struck proton escapes from the nucleus A without interaction. Several calculations predict a significant increase in T with momentum transfer, a phenomenon known as Color Transparency. Within the measurement uncertainty, no increase is seen for any of the nuclei studied.