Physics Commons^™

Optimization Of A Boundary Element Approach To Electromagnet Design With Application To A Host Of Current Problems In Magnetic Resonance Imaging, Chad T. Harris

Electronic Thesis and Dissertation Repository

Magnetic resonance imaging (MRI) has proven to be a valuable methodological approach in both basic research and clinical practice. However, significant hardware advances are still needed in order to further improve and extend the applications of the technique. The present dissertation predominantly addresses gradient and shim coil design (sub-systems of the MR system).

A design study to investigate gradient performance over a set of surface geometries ranging in curvature from planar to a full cylinder using the boundary element (BE) method is presented. The results of this study serve as a guide for future planar and pseudo-planar gradient systems for …

The Study Of Nanophotonic Switching Mechanisms In Photonic And Metallic Heterostructures, Joel Cox

Electronic Thesis and Dissertation Repository

In this thesis, nanophotonic switching mechanisms and light-matter interactions are explored in photonic and metallic heterostructures and nanocomposites. These heterostructures are made using various combinations of photonic crystals (PCs), quantum dots (QDs), and graphene or metal nanoparticles (MNPs).

PC heterostructures are formed by combining different PCs so that photons in a specific energy range can propagate in certain regions along one direction and cannot propagate in others. This band structure engineering is used to form photonic quantum wells (PQWs) that have discrete energy states along one dimension. By simulating the photon transmission along the direction of confinement, resonant photon tunnelling …

Approaches Toward Combining Positron Emission Tomography With Magnetic Resonance Imaging, Geron A. Bindseil

Electronic Thesis and Dissertation Repository

Positron emission tomography (PET) and magnetic resonance imaging (MRI) provide complementary information, and there has been a great deal of research effort to combine these two modalities. A major engineering hurdle is that photomultiplier tubes (PMT), used in conventional PET detectors, are sensitive to magnetic field. This thesis explores the design considerations of different ways of combining small animal PMT-based PET systems with MRI through experimentation, modelling and Monte Carlo simulation. A proof-of-principle hybrid PET and field-cycled MRI system was built and the first multimodality images are shown. A Siemens Inveon PET was exposed to magnetic fields of different strengths …

Hybrid Lattice Boltzmann - Molecular Dynamics Simulations With Both Simple And Complex Fluids, Frances E. Mackay

Electronic Thesis and Dissertation Repository

The behaviour and properties of colloidal suspensions strongly depend on the interactions arising between the immersed colloidal particles and the solvent. However, modelling such interactions is not at all straightforward; the larger time and length scales experienced by the colloidal particles compared to the solvent molecules makes all-atom molecular dynamics (MD) simulations of such systems completely impractical. Therefore a coarse-grained representation of the fluid is required, along with a method to couple this fluid to the colloidal particles.

In the first part of this thesis, we propose a new method for coupling both point and composite MD particles to an …

Implementation,Validation And Application Of An Automated Motion Correction Algorithm In Hepatic Perfusion Ct For Image-Guided Radiotherapy, Nikolaj Kg Jensen

Electronic Thesis and Dissertation Repository

Functional imaging holds promise in guiding, evaluating and predicting efficacy of cancer treatment. Perfusion imaging provides high resolution functional information generated by applying a model to a dynamic series of contrast enhanced anatomical images.

The objectives of this thesis are: 1) to develop and validate a registration algorithm to reduce breathing motion artifacts in hepatic perfusion CT, and 2) to evaluate the potential of perfusion CT to improve radiotherapy of liver cancer.

An automated one-dimensional correlation-based registration algorithm was developed and validated in phantom and pig studies and against manual registration of patient scans. This algorithm was used to register …

On The Physical Explanation For Quantum Computational Speedup, Michael Cuffaro

Electronic Thesis and Dissertation Repository

The aim of this dissertation is to clarify the debate over the explanation of quantum speedup and to submit, for the reader’s consideration, a tentative resolution to it. In particular, I argue that the physical explanation for quantum speedup is precisely the fact that the phenomenon of quantum entanglement enables a quantum computer to fully exploit the representational capacity of Hilbert space. This is impossible for classical systems, joint states of which must always be representable as product states. I begin the dissertation by considering, in Chapter 2, the most popular of the candidate physical explanations for quantum speedup: the …

Carbon Nitride And Conjugated Polymer Composite Materials, Josh Byers

Electronic Thesis and Dissertation Repository

The semiconductor and photovoltaic properties of carbon nitride (CNx) thin films prepared using a reactive magnetron sputtering technique were investigated both individually and as composites with the organic conjugated polymers polybithiophene (PBT) and poly(3-hextlthiophene) (P3HT). At low nitrogen content, the film structure was dominated by graphitic sp² percolation networks, whereas at higher nitrogen contents CNx films started to demonstrate semiconductor properties, as evidenced by the occurrence of photoconductivity and the development of a space charge region. When CNx was deposited onto a PBT substrate, it was found to function as an acceptor material improving the photocurrent generation both in …

The Study Of Optoelectronics In Semiconductor And Metallic Nanoparticle Hybrid Systems, Daniel G. Schindel

Electronic Thesis and Dissertation Repository

This thesis examines optoelectronics of photonic crystals and photonic nanofibers, especially with quantum dots and metallic nanoparticles doped into them. The simulations produced focus on the quantum dots, which are presented in an ensemble of 3-level systems.

In order to consider a photonic nanofiber in isolation, a model was developed for the density of photonic states. We studied two profiles, a square cross-section and a circular cross-section. In addition, we consider two architectures, one where a photonic crystal surrounds a dielectric fiber, and one where the fiber is another photonic crystal. We found several photonic nanofibers with a single bound …

Theory Of Model Kohn-Sham Potentials And Its Applications, Alex P. Gaiduk

Electronic Thesis and Dissertation Repository

The purpose of Kohn-Sham density functional theory is to develop increasingly accurate approximations to the exchange-correlation functional or to the corresponding potential. When one chooses to approximate the potential, the resulting model must be integrable, that is, a functional derivative of some density functional. Non-integrable potentials produce unphysical results such as energies that are not translationally or rotationally invariant. The thesis introduces methods for constructing integrable model potentials, developing properly invariant energy functionals from model potentials, and designing model potentials that yield accurate electronic excitation energies. Integrable potentials can be constructed using powerful analytic integrability conditions derived in this work. …

Fast Absolute Quantification Of In Vivo Water And Fat Content With Magnetic Resonance Imaging, Yifan Cui

Electronic Thesis and Dissertation Repository

Quantitative water fat imaging offers a non-invasive method for monitoring and staging diseases associated with changes in either water or fat content in tissue. In this work absolute water and fat mass density measurement with in vivo Magnetic Resonance Imaging (MRI) is demonstrated. T₁ independent, T₂^* corrected chemical shift based water-fat separated images are acquired. By placing a phantom with known mass density in the field of view for signal intensity calibration, absolute water or fat mass density can be computed, assuming the B₁⁺ (transmit) and B₁^- (receive) fields can be measured. Phantom …

Synthesis And Characterization Of Copper Nanoparticles And Copper-Polymer Nanocomposites For Plasmonic Photovoltaic Applications, Sabastine Chukwuemeka Ezugwu

Electronic Thesis and Dissertation Repository

Deposition techniques for the fabrication of metal nanostructures influence their morphological properties, which in turn control their optical behavior. Here, copper nanoparticles (np-Cu’s) were grown using a deposition system that was specifically set up during this work, and is based on a radio frequency (RF) sputtering source that can operate at high temperature and under bias voltage. The effect of deposition conditions (RF power, chamber pressure and substrate bias voltage) on RF sputtered np-Cu’s using RF sputtering has been studied. The study included a comparison between the morphological and optical properties of as-grown np-Cu’s and thermally treated samples. The characterization …

Multi-Sensor Calibration And Validation Of The Uwo-Pcl Water Vapour Lidar, Robin Wing

Electronic Thesis and Dissertation Repository

The Purple Crow Lidar (PCL) has recently participated in a water vapour validation cam- paign with the NASA/GSFC Atmospheric Laboratory for Validation/Interagency Collaboration and Education (ALVICE) Lidar. The purpose of this calibration campaign is to insure that PCL water vapour measurements are of sufficient quality for use in scientific investigations of atmo- spheric change, and to be included in the Network for the Detection of Atmospheric Climate Change (NDACC) data base. The detection of long term changes in water vapour concentra- tion, particularly in the upper troposphere and lower stratosphere (UTLS) is an issue of pressing scientific, ecological and societal …

Simultaneous Radar And Video Meteors, Robert J. Weryk

Electronic Thesis and Dissertation Repository

The goal of this thesis is to better understand the physical and chemical properties of meteoroids by using simultaneous radar and video observations of meteors. The Canadian Meteor Orbit Radar (CMOR) and several Gen-III image-intensified CCD cameras were used to measure common meteors and validate metric errors determined through Monte Carlo modelling and to relate radar electron line density (q) to video photon radiant power (I). By adopting an ionisation coefficient from Jones (1997) and using recorded measurements of q/I, a corresponding estimate of the fraction of meteoroid kinetic energy loss converted into light (luminous efficiency) was found.

It was …

The Behavior Of A Falling Particle In A Funnel, Tahani Hassn Aldahri

Electronic Thesis and Dissertation Repository

Recent theoretical work has suggested that a frictional, inelastic, spherical particle falling under gravity through a symmetric funnel will display interesting behavior as a function of the angle of the funnel walls. We have studied this system experimentally, using high-speed video to record the particle trajectories. By analyzing the video images, we have analyzed the time the ball spends in the funnel and its energy loss as functions of the angle of the walls with respect to the horizontal. The coefficient of restitution was also varied by using different balls and funnel materials. We found some similarities and differences between …

Influence Of Quantum Dot Structure On The Optical Properties Of Group Iv Materials Fabricated By Ion Implantation, Eric G. Barbagiovanni

Electronic Thesis and Dissertation Repository

In nanostructures (NSs), to acquire a fundamental understanding of the electronic states by studying the optical properties is inherently complicated. A widely used simplification to this problem comes about by developing a model for a small scale representation of types of NSs and applying it to a hierarchy of fabrication methods. However, this methodology fails to account for structural differences incurred by the fabrication method that lead to differences in the optical properties. Proper modelling is realized by first considering the proper range of experimental parameters individually as inputs to a theoretical model and applying the correct parameters to the …

Topics In Field Theory, Alexander Patrushev

Electronic Thesis and Dissertation Repository

This thesis consists of different projects in classical and quantum field theory on a curved background which are connected by a common usage of theoretical ideas as well as cal- culation techniques. The introduction clarifies such connections. In the second chapter we apply the Dirac constraint formalism to the second and first order 1 + 1 dimensional gravitational action coupled to a scalar field. The third chapter is devoted to a calculation of the one loop effective action for a spinor field coupled to a constant background chiral vector field. In the fourth chapter we find a new expression for …

Molecular Dynamics Studies Of Water Flow In Carbon Nanotubes, Alexander D. Marshall

Electronic Thesis and Dissertation Repository

We present classical molecular dynamics (MD) simulations providing insight into the behaviour of water. We focus on confined water, the properties of which are often significantly different from the properties of bulk water.

First, we performed several simulations investigating the handling of long-range interactions in GROMACS [1], a MD simulation package. Selection of simulation protocols such as handling of long-range interactions is often overlooked, sometimes to the significant detriment of the final result [2, 3, 4]. Ensuring that the chosen simulation protocols are appropriate is a critical step in computer simulation.

Second, we performed MD simulations where water flowed between …

Preoperative Planning Of Robotics-Assisted Minimally Invasive Cardiac Surgery Under Uncertainty, Hamidreza Azimian

Electronic Thesis and Dissertation Repository

In this thesis, a computational framework for patient-specific preoperative planning of Robotics-Assisted Minimally Invasive Cardiac Surgery (RAMICS) is developed. It is expected that preoperative planning of RAMICS will improve the rate of success by considering robot kinematics, patient-specific thoracic anatomy, and procedure-specific intraoperative conditions. Given the significant anatomical features localized in the preoperative computed tomography images of a patient's thorax, port locations and robot orientations (with respect to the patient's body coordinate frame) are determined to optimize characteristics such as dexterity, reachability, tool approach angles and maneuverability. In this thesis, two approaches for preoperative planning of RAMICS are proposed that …

Phase Field Crystal Approach To The Solidification Of Ferromagnetic Materials, Niloufar Faghihi

Electronic Thesis and Dissertation Repository

The dependence of the magnetic hardness on the microstructure of magnetic solids is investigated, using a field theoretical approach, called the Magnetic Phase Field Crystal model. We constructed the free energy by extending the Phase Field Crystal (PFC) formalism and including terms to incorporate the ferromagnetic phase transition and the anisotropic magneto-elastic effects, i.e., the magnetostriction effect. Using this model we performed both analytical calculations and numerical simulations to study the coupling between the magnetic and elastic properties in ferromagnetic solids. By analytically minimizing the free energy, we calculated the equilibrium phases of the system to be liquid, non-magnetic …

Mri-Based Attenuation Correction In Emission Computed Tomography, Harry R. Marshall

Electronic Thesis and Dissertation Repository

The hybridization of magnetic resonance imaging (MRI) with positron emission tomography (PET) or single photon emission computed tomography (SPECT) enables the collection of an assortment of biological data in spatial and temporal register. However, both PET and SPECT are subject to photon attenuation, a process that degrades image quality and precludes quantification. To correct for the effects of attenuation, the spatial distribution of linear attenuation coefficients (μ-coefficients) within and about the patient must be available. Unfortunately, extracting μ-coefficients from MRI is non-trivial. In this thesis, I explore the problem of MRI-based attenuation correction (AC) in emission tomography.

In particular, I …

Electrohydrodynamic Enhancement Of Heat Transfer And Mass Transport In Gaseous Media, Bulk Dielectric Liquids And Dielectric Thin Liquid Films, Seyed Reza Mahmoudi

Electronic Thesis and Dissertation Repository

Controlling transport phenomena in liquid and gaseous media through electrostatic forces has brought new important scientific and industrial applications. Although numerous EHD applications have been explored and extensively studied so far, the fast-growing technologies, mainly in the semiconductor industry, introduce new challenges and demands. These challenges require enhancement of heat transfer and mass transport in small scales (sometimes in molecular scales) to remove highly concentrated heat fluxes from reduced size devices. Electric field induced flows, or electrohydrodynamics (EHD), have shown promise in both macro and micro-scale devices.

Several existing problems in EHD heat transfer enhancements were investigated in this thesis. …

A Method To Measure The Detective Quantum Efficiency Of Radiographic Systems In Clinical Setting, Michael C. Mcdonald

Electronic Thesis and Dissertation Repository

The risks associated with exposure to radiation make it critical that digital imaging systems give the best possible images for a given dose to the patient. The DQE is the most widely accepted measure of performance and dose efficiency for digital radiography systems, however it is not commonly measured in a clinical environment as part of routine quality assurance. The primary reason for this is that the data provided to the user by clinical systems has typically undergone image processing and therefore may have a non-linear characteristic response. This is a problem because the Fourier metrics of the DQE require …

Magnetic Properties And Defects In Iron Implanted Strontium Titanate Single Crystals And Thin Films, Misha Chavarha

Electronic Thesis and Dissertation Repository

Physical vapor deposition was used to grow good quality crystalline stoichiometric SrTiO₃ thin films on Si(001) substrate using a systematic approach starting from understanding of kinetics and thermodynamics of the system and finishing with the development of procedure for high quality SrTiO₃/Si interface. Growth of optimized SrTiO₃ perovskite structure on Si requires careful transformation of a thin interfacial SrSix layer into the initial SrTiO₃ lattice cells. The critical aspects of the growth, such as low temperature and low oxidant partial pressure, are explained in details. Crystallinity and stoichiometry of SrTiO₃ were verified using powder …

Hyperpolarized Noble Gas Magnetic Resonance Imaging And Dynamic Spectroscopy For Investigation Of Rat Models Of Lung Inflammation, Matthew S. Fox

Electronic Thesis and Dissertation Repository

Imaging of the lungs using non-ionizing approaches such as hyperpolarized ³He and ¹²⁹Xe magnetic resonance imaging (MRI) is a useful tool both for research and clinical applications. This work focused on development of ¹²⁹Xe MRI techniques to investigate inflammation in rat lungs. A rodent model of inflammation, specifically radiation-induced lung injury (RILI) was developed using a collimated ⁶⁰Co source. A quantitative MRI technique measuring absolute ventilated lung volume (|VLV|) was performed using ¹²⁹Xe and ³He. Following a comparison between |VLV| values obtained from rats using the previously established ³He method and those obtained …

Molecular Dynamics Studies Of Interactions Of Phospholipid Membranes With Dehydroergosterol And Penetrating Peptides, Amir Mohsen Pourmousa Abkenar

Electronic Thesis and Dissertation Repository

We have performed molecular modeling of membrane and peptide systems by employing the classical molecular dynamics method and force field parameterizations. In this thesis, our main interest is the interaction of sterols as well as peptides with membranes. The thesis consists of three related projects. The first project focuses on cholesterol (CHOL) and dehydroergosterol (DHE) interacting with palmitoyl-oleoyl phosphatidylcholine (POPC) lipid bilayers. We study the effects of both sterols on the bilayer and compare them with each other. We first study the condensing and ordering effect of these sterols. Then, we study their orientations within the bilayer and relate them …

Quantum Coherence And Interference In Metallic Photonic Crystals And Hybrid Systems, Ali Hatef

Electronic Thesis and Dissertation Repository

In the first part of the thesis, we study the absorption coefficient of quantum dots doped in metallic photonic crystals under different circumferences. We study numerically the temporal evolution of the absorption coefficient profile where a probe field is applied to monitor the absorption process in two cases, when quantum dots are embedded lightly and densely. We also studied the effect of a changing plasma frequency on the absorption profile of quantum dots two possible field configurations. We show that the changes in plasma energy can take the system from the absorption region to the transparent and gain region.

As …

High Power Systems For Dynamic Field Control And Shielding In The Mr Environment, Dustin W. Haw

Electronic Thesis and Dissertation Repository

This thesis addresses several aspects of gradient and shim coil design and fabrication. New design techniques are coupled with experimental construction methods to expand small animal insert gradient and shim technology. The design techniques are also applied to other areas of magnetic resonance hardware.

A custom 2-axis gradient insert coil is designed and fabricated for the purpose of eddy current characterization. The construction tolerances were examined via bench top inductance measurements and eddy currents measurement inside a 7.0 T head-only MR system. A great deal of freedom is available when positioning shielding coils with respect to their corresponding primary coils …

Convection Due To Spatially Distributed Heating, Mohammad Zakir Hossain

Electronic Thesis and Dissertation Repository

Convection in an infinite horizontal slot subject to spatially distributed heating has been investigated for a wide range of Prandtl numbers. The primary flow response consists of convection in the form of rolls. When heating wave number alpha is sufficiently large the convection is found to be limited to a layer adjacent to lower wall and a uniform conductive layer emerges at upper section of the slot.

Conditions leading to the emergence of secondary convection have been identified using linear stability of the above primary convection. The secondary convection gives rise to longitudinal, or transverse, or oblique rolls; or to …

Electronic And Magnetic Excitations In Graphene And Magnetic Nano-Ribbons, Maher Zakaria Ahmed Selim

Electronic Thesis and Dissertation Repository

The discovery of graphene - a 2D material with superior physical properties - in 2004 was important for the intensive global research to find alternatives to three-dimensional (3D) semiconductor materials in industry. At the same time there have been exciting advances for 2D magnetic materials on the nanometer scale. The superior properties of graphene are mainly attributed to its crystal structure and its relatively short-range interactions. These properties show that natural and artificial 2D materials are promising for new applications.

In this thesis we have carried out a comprehensive investigation of the effects of the 2D lattice structures, the roles …

Hyperthermal H2 Induced C–H Bond Cleavage: A Novel Approach To Cross-Linking Of Organic Molecules, Tomas Trebicky

Electronic Thesis and Dissertation Repository

The development of simple and effective methods of incorporating molecular moieties with desirable properties into new functional materials is one of the ultimate goals of material scientists. The work presented in this thesis demonstrates an easy way to accomplish this using a beam of gaseous H₂, which we call hyperthermal hydrogen induced cross-linking (HHIC). We prove theoretically and experimentally that when the kinetic energy of H₂ is raised to ~20 eV, it becomes a light-mass projectile which is energetic enough to knock hydrogen atoms off of organic molecules, but not other heavier atoms. By developing a reactor …