Physical Sciences and Mathematics Commons^™

Effects Of Increasing Temperature And Acidification On The Growth And Competitive Success Of Alexandrium Catenella From The Gulf Of Maine, Drajad Seto

Electronic Theses and Dissertations

The increases in ocean temperature and pCO2 due to climate change are projected to affect the growth and future prevalence of Harmful Algal Blooms (HABs) in nearshore waters, but systematic studies on the effects these climate drivers have on harmful algal species are lacking. In particular, little is known about how future climate scenarios will affect the growth of the toxic dinoflagellate Alexandrium catenella, which produces the toxins responsible for paralytic shellfish poisoning (PSP) that threaten the health and economy of coastal communities in the Gulf of Maine. I examined growth responses of A. catenella and two other naturally co-occurring …

Riding The Wave Of Microplastics In Bermuda, Molly E. Riihiluoma

Pell Scholars and Senior Theses

The presence of marine debris and microplastics in the Earth’s oceans are a global environmental issue. Bermuda’s location in the middle of the North Atlantic Gyre makes it the perfect case study for this work. As the crisis unfolds, Bermuda’s environment, economy, and population are at risk of witnessing firsthand the effects of plastic pollution. This paper relies on scholarly research as well as anecdotal evidence from retail stores and locals to compile information in order to provide necessary recommendations to benefit Bermuda’s ocean health. This research evaluates the pros and cons of policies which could mitigate the problem. Analysis …

Species Richness, Diversity, And Abundance Of Sponge Communities In Broward County, Florida, 2000-2015, Jessica Price

HCNSO Student Theses and Dissertations

Sponges (Porifera) are a major component of coral reef ecosystems. They outnumber coral species on the Florida Reef Tract, and in places, account for more living cover. Because coral reefs are a vital part of Florida’s economy, it is important to understand how local sponge assemblages vary spatially and temporally, especially as corals continue to decline. However, long-term observations of sponge assemblages (species richness, diversity and abundance) are lacking. To address this, annual photoquadrats were analyzed from a series of 25 sites off Broward County between 2000 and 2015. Variations in sponge assemblages were then compared to several natural and …

Peruvian Pinnipeds As Archivists Of Enso Effects, Mickie Rae Edwards

HCNSO Student Theses and Dissertations

Environmental fluctuations in the eastern Pacific Ocean are reflected in the tissues of some of its most vulnerable apex predators, the Peruvian fur seal (PFS) Arctocephalus australis ssp.and the South American sea lion (SASL) Otaria byronia.These large pinnipeds live in sympatry along the Pacific coastline of South America and forage within the neritic waters over the continental shelf. The coastal waters off Peru are a region of great environmental fluctuations due to periodic, oscillating El Niño- La Niña- Southern Oscillation (ENSO) events, which result in ecosystem-wide food web changes. Pinniped vibrissae (whiskers) are continuously growing keratinous tissues and …

Ecophysiology Of Lionfish Metabolic And Visual Systems: Are There Physiological Limits To Inshore Invasion?, Aaron Hasenei

HCNSO Student Theses and Dissertations

Lionfish (Pterois spp.), an invasive species native to the Indo-Pacific, have permanently established themselves throughout the greater Caribbean, Gulf of Mexico, and regions of the Western Atlantic ranging from as far north as North Carolina to central Brazil. As their fundamental range expands, lionfish threaten to migrate into estuarine environments as they have been found to tolerate low salinities and an eclectic range of temperatures. The physiological capacity of invasion was assessed by quantifying the visual ecology of lionfish utilizing corneal electroretinography (ERG) as well as their metabolic scope and hypoxia tolerances under various temperature-oxygen-regimes utilizing intermittent-flow respirometry. Seasonal …

Indirect Effects Of Ocean Warming And Acidification On The Realized Recruitment Of Agaricia Agaricites, Allan Anderson

HCNSO Student Theses and Dissertations

Over the past few decades, coral cover has declined worldwide due to overfishing, disease, and storms, and these effects have been exacerbated by ocean warming and acidification. Corals are extremely susceptible to these changes because they are already living close to their thermal and aragonite saturation thresholds. Ocean warming and acidification (OAW) may also impact coral survival and growth by impacting their settlement cues. Coral larvae use crustose coralline algae (CCA) and their associated biofilms as cues for settlement, i.e., habitat selection. Settlement cues can also be negatively affected by increased water temperature and acidity. It was hypothesized that the …

Turbulent And Electromagnetic Signature Of Small- And Fine-Scale Biological And Oceanographic Processes, Cayla Whitney Dean

HCNSO Student Theses and Dissertations

Small- and fine-scale biological and oceanographic processes may have a measurable electromagnetic signature. These types of processes inherently involve turbulence and three-dimensional dynamics. Traditional models of the electromagnetic signature of oceanographic processes are of an analytical nature, do not account for three-dimensional boundary layer dynamics or turbulence, self-inductance, and may not describe the variety of the environmental conditions occurring in the ocean. In order to address this problem, I have implemented magnetohydrodynamic (MHD) computational fluid dynamics (CFD) tools, which has allowed for the evaluation of the electromagnetic signature of a number of small- and fine-scale biological and oceanographic processes in …

Optimization Of Light Irradiance During The Early Life Of Sexually-Produced Porites Astreoides And Agaricia Agaricites Recruits, Nicholas J. Mcmahon

HCNSO Student Theses and Dissertations

Current solutions of coral restoration rely mainly on fragmentation. Though a reliable technique, this asexual form of reproduction does not benefit the genetic diversity of the coral reef. With many global and local stressors threatening corals’ existence, the resiliency of corals to future ocean conditions depends highly on sexual reproduction to produce new genotypes. New technology allows coral spawning/larval release, larval settlement and rearing to be carried out in an aquarium system. Many of the techniques necessary to maintain coral recruits are well-established, however the effects of light intensity remain to be studied for these early life stages. Newly …

Uncovering The Role Of Propagule Pressure In Determining Establishment Success Using A Synthetic Biology Approach, Michael D. Dressler

HCNSO Student Theses and Dissertations

The spread of invasive species poses a major ecological and economical threat. Consequently there are ongoing efforts to develop a generalizable mechanism to predict establishment success of non-native species. One proposed mechanism to predict establishment success is propagule pressure, which is defined as the number of individuals introduced at a given time. Although some studies have demonstrated a positive correlation between propagule pressure and establishment success, others have not, and the effect of propagule pressure on establishment success remains unclear. To address this challenge, a strain of bacteria engineered with an Allee effect, a growth dynamic that is often associated …

Aquatic Invasions: Causes, Consequences, And Solutions, Corey Ackerson, Melissa Carmichael, Olivia Carpenter, Hannah Crull, Jillian Henrichon, Maeve Mcgowan, Allison Mills, Nicholas Paolini, Everett Pierce, Nicole Scherer, Nicole Volosin, Kady Winsor, Markus Frederich

Marine Sciences Student Projects

Invasive species represent a global threat to ecosystems, human health, and the economy. A basic knowledge of invasive species biology is crucial to understand current and future impacts and implications. The purpose of this book is to provide a broad background on invasive species, and also details on specific examples through case studies.

The students in the course Aquatic Invasive Species (MAR 442) at the University of New England in Biddeford, Maine, have researched and reviewed scientific literature to educate readers about these issues. The class, comprised of twelve junior and senior Marine Science, Marine Affairs, Applied Mathematics, and Environmental …

Measuring Connective Capacity Throughout The Gulf Of Mexico Fishery Management Network, Anthony Rocha Lima

Theses and Dissertations

The Gulf of Mexico provides substantial resources along its 1,680-mile coastline, spanning 5 U.S. states and providing millions of pounds of seafood and hundreds of millions in revenue annually. Continued success of the fishery relies on the ability of a large, complex, multiagency network to find the best solutions to balance the needs of humans, as well as ensure long-term sustainability. Organizations with varying objectives require effective communication when addressing intricate ecosystem-based management topics such as endangered species and regional economies.

To better understand the connectivity within the Gulf fishery management network, an IRB reviewed survey was dispersed to the …

Spectral Sensitivity In Ray-Finned Fishes: Diversity, Ecology And Shared Descent, Lorian E. Schweikert, Robert R. Fitak, Eleanor M. Caves, Tracey Sutton, Sonke Johnsen

Marine & Environmental Sciences Faculty Articles

A major goal of sensory ecology is to identify factors that underlie sensory-trait variation. One open question centers on why fishes show the greatest diversity among vertebrates in their capacity to detect color (i.e. spectral sensitivity). Over the past several decades, λ_max values (photoreceptor class peak sensitivity) and chromacy (photoreceptor class number) have been cataloged for hundreds of fish species, yet the ecological basis of this diversity and the functional significance of high chromacy levels (e.g. tetra- and pentachromacy) remain unclear. In this study, we examined phylogenetic, physiological and ecological patterns of spectral sensitivity of ray-finned fishes (Actinoptergyii) via …

Along-Shelf Connectivity And Circumpolar Gene Flow In Antarctic Silverfish (Pleuragramma Antarctica), Jilda Alicia Caccavo, Chiara Papetti, Maj Wetjen, Rainer Knust, Julian R. Ashford, Lorenzo Zane

OES Faculty Publications

The Antarctic silverfish (Pleuragramma antarctica) is a critically important forage species with a circumpolar distribution and is unique among other notothenioid species for its wholly pelagic life cycle. Previous studies have provided mixed evidence of population structure over regional and circumpolar scales. The aim of the present study was to test the recent population hypothesis for Antarctic silverfish, which emphasizes the interplay between life history and hydrography in shaping connectivity. A total of 1067 individuals were collected over 25 years from different locations on a circumpolar scale. Samples were genotyped at fifteen microsatellites to assess population differentiation and …

Symbiotic Unicellular Cyanobacteria Fix Nitrogen In The Arctic Ocean, K. Harding, K. A. Turk-Kubo, Rachel E. Sipler, M. M. Mills, D. A. Bronk

VIMS Articles

Biological dinitrogen (N2) fixation is an important source of nitrogen (N) in low-latitude open oceans. The unusual N2-fixing unicellular cyanobacteria (UCYN-A)/haptophyte symbiosis has been found in an increasing number of unexpected environments, including northern waters of the Danish Straight and Bering and Chukchi Seas. We used nanoscale secondary ion mass spectrometry (nanoSIMS) to measure 15N2 uptake into UCYN-A/haptophyte symbiosis and found that UCYN-A strains identical to low-latitude strains are fixing N2 in the Bering and Chukchi Seas, at rates comparable to subtropical waters. These results show definitively that cyanobacterial N2 fixation is not constrained to subtropical waters, challenging paradigms and …

Effects Of Age, Mass, And Terrestrial Duration On Oxygen Store Development In Phocids And Otariids, Rachael M. Stevenson

HCNSO Student Capstones

Diving ontogeny among pinniped species was explored to determine how oxygen store development was affected by age, mass, and terrestrial duration between Phocidae and Otariidae. Distinct physiological and post-natal developmental differences exist between the two families which contribute to oxygen store and diving development. Blood oxygen data for six phocids and otariids and muscle oxygen data for two phocids and otariids were obtained. Body mass significantly (p

Microbiome Diversity Of Coastal Tidal Floodwater In Southeastern Florida, Marissa Wickes

HCNSO Student Theses and Dissertations

Over 3.7 million people are in high risk of coastal flooding and live within 1 mile of high tide in the US alone. The Atlantic coast is one of the most vulnerable areas due to its low elevation, large population, and economic importance (Bray, et. al, 2016). Coastal municipalities in the region of Southeast Florida, such as the cities of Miami, Miami Beach, Fort Lauderdale, etc., are at especial risk from coastal flooding related to sea level rise. The US National Climate Assessment has named Miami, Florida as the economically most vulnerable city impacted by this sea level rise …

Blue Marlin (Makaira Nigricans) Horizontal Movements In The Western South Atlantic, Eduardo W. Wanick

HCNSO Student Capstones

Blue marlin (Makaira nigricans) have been documented to undertake long – and sometimes transoceanic – migrations, according to electronic pop-up satellite archival tag (PSAT) data obtained primarily in the western North Atlantic, with additional reported deployments from selected locations in the Pacific. Information on the movements of blue marlin in the South Atlantic, however, is lacking, despite evidence of spawning aggregations off the coast of Brazil during the Southern Hemisphere’s late spring and summer. Additionally, there are no reported long-term PSAT tag deployments on blue marlin in the western South Atlantic. Therefore, their movements in that large area …

Serotonin: Octopus Love Potion?, Lauren E. Nadler

Marine & Environmental Sciences Faculty Articles

No abstract provided.

Population Dynamics And Genotypic Richness Of The Threatened Acropora Spp. And Their Hybrid In The U.S. Virgin Islands, Hannah F. Nylander-Asplin

HCNSO Student Theses and Dissertations

Since the 1980’s, there has been an unprecedented decline in the reef-building Caribbean corals, Acropora cervicornis and A. palmata, which has led to their listing as “threatened” under the U.S Endangered Species Act. Despite this protective status, these Acropora species continue to experience declines primarily attributed to disease, global climate change, and storm damage. Recent evidence suggests the hybrid of these threatened species (A. prolifera) is found at abundances similar to or higher than the parental species at many sites throughout the Caribbean. However, there is still much that is unknown as to how and why hybrids may …

Early Life History Response Of Reef Building Coral, Orbicella Faveolata, To Ocean Acidification And Warming, Kelly A. Pitts

HCNSO Student Theses and Dissertations

Ocean warming and acidification pose major threats to coral reef organisms. It is unknown how the early life history stages of Atlantic corals cope with the combined effects of these two global environmental stressors. Here, I investigate how these stressors influence the fertilization success, larval survivorship, and settlement of the threatened Atlantic coral, Orbicella faveolata. Gametes from O. faveolata were subjected to a factorial combination of present and future scenarios of oceanic temperatures (28.5° C and 30° C) and pH (8.2 and 8.0) predicted to occur by 2050. Results indicate that treatment type did not significantly affect fertilization success. …

Evaluation Of Spatial Generalization Characteristics Of A Robust Classifier As Applied To Coral Reef Habitats In Remote Islands Of The Pacific Ocean, Justin J. Gapper, Hesham El-Askary, Erik J. Linstead, Thomas Piechota

Mathematics, Physics, and Computer Science Faculty Articles and Research

This study was an evaluation of the spectral signature generalization properties of coral across four remote Pacific Ocean reefs. The sites under consideration have not been the subject of previous studies for coral classification using remote sensing data. Previous research regarding using remote sensing to identify reefs has been limited to in-situ assessment, with some researchers also performing temporal analysis of a selected area of interest. This study expanded the previous in-situ analyses by evaluating the ability of a basic predictor, Linear Discriminant Analysis (LDA), trained on Depth Invariant Indices calculated from the spectral signature of coral in one location …

A Multidecade Experiment Shows That Fertilization By Salmon Carcasses Enhanced Tree Growth In The Riparian Zone, Thomas P. Quinn, Helfield M. James, Catherine S. Austin, Rachel A. Hovel, Andrew Godard Bunn

Environmental Sciences Faculty and Staff Publications

As they return to spawn and die in their natal streams, anadromous, semelparous fishes such as Pacific salmon import marine‐derived nutrients to otherwise nutrient‐poor freshwater and riparian ecosystems. Diverse organisms exploit this resource, and previous studies have indicated that riparian tree growth may be enhanced by such marine‐derived nutrients. However, these studies were largely inferential and did not account for all factors affecting tree growth. As an experimental test of the contribution of carcasses to tree growth, for 20 yr, we systematically deposited all sockeye salmon (Oncorhynchus nerka) carcasses (217,055 individual salmon) in the riparian zone on one …

Resource Assessment Report Temperate Demersal Elasmobranch Resource Of Western Australia, Matias Braccini, Nick Blay, S. A. Hesp, Brett Molony

Fisheries research reports

This document provides a cumulative description and assessment of the TDER and all of the fishing activities (i.e. fisheries / fishing sectors) affecting this resource in WA. Future Resource Assessment Reports will assess the Statewide Sharks and Rays Resource. The report is focused on the temperate indicator species (whiskery, gummy, dusky and sandbar sharks) used to assess the suites of demersal sharks and rays that comprise this resource. These species are primarily captured by demersal gillnets used in the TDGDLF that operate in the West Coast and South Coast Bioregions. For the North Coast bioregion, no commercial fishing for sharks …

Mesobot : An Autonomous Underwater Vehicle For Tracking And Sampling Midwater Targets, Dana R. Yoerger, Molly Curran, Justin Fujii, Christopher R. German, Daniel Gomez-Ibanez, Annette F. Govindarajan, Jonathan C. Howland, Joel K. Llopiz, Peter H. Wiebe, Brett W. Hobson, Kakani Katija, Michael Risi, Bruce H. Robison, Cailean J. Wilkinson, Stephen M. Rock, John A. Breier

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Mesobot, a new class of autonomous underwater vehicle, will address specific unmet needs for observing slow-moving targets in the midwater ocean. Mesobot will track targets such as zooplankton, fish, and descending particle aggregates using a control system based on stereo cameras and a combination of thrusters and a variable buoyancy system. The vehicle will also be able to collect biogeochemical and environmental DNA (eDNA) samples using a pumped filter sampler.

A Dexterous, Glove-Based Teleoperable Low-Power Soft Robotic Arm For Delicate Deep-Sea Biological Exploration, Brennan T. Phillips, Kaitlyn P. Becker, Shunichi Kurumaya, Kevin C. Galloway, Griffin Whittredge, Daniel M. Vogt, Clark B. Teeple, Michelle H. Rosen, Vincent A. Pieribone, David F. Gruber, Robert J. Wood

Publications and Research

Modern marine biologists seeking to study or interact with deep-sea organisms are confronted with few options beyond industrial robotic arms, claws, and suction samplers. This limits biological interactions to a subset of “rugged” and mostly immotile fauna. As the deep sea is one of the most biologically diverse and least studied ecosystems on the planet, there is much room for innovation in facilitating delicate interactions with a multitude of organisms. The biodiversity and physiology of shallow marine systems, such as coral reefs, are common study targets due to the easier nature of access; SCUBA diving allows for in situ delicate …

The Octocoral Fishery In The Southeastern U.S. And Gulf Of Mexico, Mark Chiappone, Paola Espitia, Leanne M. Rutten, Steven Miller

Marine & Environmental Sciences Faculty Articles

Octocorals, also known as gorgonians and soft corals, were previously managed by the U.S. South Atlantic (SAFMC) and Gulf of Mexico (GMFMC) Fishery Management Councils through a joint Coral Fishery Management Plan (FMP). Because octocorals are mostly collected from Florida waters, the Florida Fish and Wildlife Conservation Commission (FWC) is currently tasked with managing octocoral collection, including the monitoring of colony landings, in the Economic Exclusive Zone (EEZ) adjacent to Florida. Collection of 70,000 colonies per year total, which applies to both state and EEZ waters off Florida, is permitted under Rule 68B- 42.006 of the Florida Administrative Code, but …

Restoring The Eastern Oyster: How Much Progress Has Been Made In 53 Years?, Ab Hernandez, Rochelle Brumbaugh, P Fredrick, R Grizzle, Mark Luckenbach, Ch Peterson, C Angelini

VIMS Articles

Coastal ecosystem restoration is accelerating globally as a means of enhancing shoreline protection, carbon storage, water quality, fisheries, and biodiversity. Among the most substantial of these efforts have been those focused on re-establishing oyster reefs across the US Atlantic and Gulf coasts. Despite considerable investment, it is unclear how the scale of and approaches toward oyster restoration have evolved. A synthesis of 1768 projects undertaken since 1964 reveals that oyster substrate restoration efforts have primarily been concentrated in the Chesapeake Bay and the Gulf Coast, have been heavily reliant on oyster shell, and have re-established 4.5% of the reef area …

The Influence Of Habitat Preference On Longitudinal Population Composition And Distribution Of Groupers (Serranidae) In Chumbe Island Coral Park, Zanzibar Tanzania, Caroline Daley

Independent Study Project (ISP) Collection

A survey of six common grouper (Serranidae) species was conducted on both the western protected and eastern unprotected reefs around Chumbe Island. Species, estimated maturity, and fundamental niche and general habitat preference was extrapolated based on observed realized niche and qualified according to substrate, depth, slope position, and general reef region. Abundance, biomass density, and biodiversity of Serranid populations were compared among locations on the reef with habitat preference in mind in order to best assess how habitat influences population composition, distribution, and health. The results of this study provide depth to previous research on the protected reef and indicate …

A Climatological Dataset Of Nutrient, Chlorophyll, And Particulate Matter Distributions On The Ross Sea Continental Shelf Derived From Cruise-Based Measurements Spanning 1967 To 2016, Walker O. Smith Jr., Daniel E. Kaufman

Data

This dataset includes data used in the publication Smith and Kaufman (2018), Progress in Oceanography, which examines the temporal and spatial distributions of nutrients and particulate matter in the Ross Sea continental Shelf using cruise-based observations, and compares the resulting annual productivity estimates with previously reported satellite-based estimates. Specifically, these data represent distributions of nutrients, chlorophyll, particulate organic carbon, particulate organic nitrogen, and biogenic silica that were compiled from 42 cruises (from 1967 - 2016) to the Ross Sea continental shelf to generate a comprehensive climatological dataset for November, December, January, and February. This climatology provides a novel look at …

Role Of Water Flow Regime In The Swimming Behaviour And Escape Performance Of A Schooling Fish, Lauren E. Nadler, Shaun S. Killen, Paolo Domenici, Mark I. Mccormick

Marine & Environmental Sciences Faculty Articles

Animals are exposed to variable and rapidly changing environmental flow conditions, such as wind in terrestrial habitats and currents in aquatic systems. For fishes, previous work suggests that individuals exhibit flow-induced changes in aerobic swimming performance. Yet, no one has examined whether similar plasticity is found in fast-start escape responses, which are modulated by anaerobic swimming performance, sensory stimuli and neural control. In this study, we used fish from wild schools of the tropical damselfish Chromis viridis from shallow reefs surrounding Lizard Island in the Great Barrier Reef, Australia. The flow regime at each site was measured to ascertain differences …