Physical Sciences and Mathematics Commons^™

Inference Of Tidal Elevation In Shallow Water Using A Vessel-Towed Acoustic Doppler Current Profiler, Chunyan Li, Arnoldo Valle-Levinson, Larry P. Atkinson, Tom C. Royer

CCPO Publications

Vessel-towed acoustic Doppler current profilers (ADCPs) have been widely used to measure velocity profiles. Since the instrument is usually mounted on a catamaran floating on the surface, previous studies have used the water surface as the reference level from which the vertical coordinate for the velocity profile is defined. However, because of the tidal oscillation, the vertical coordinate thus defined is time-dependent in an Earth-coordinate system, which introduces an error to the estimated harmonic constants for the velocity. As a result, the total transport will also be in error. This is particularly a problem in shallow waters where the tidal …

Modifications Of The C37 Alkenone And Alkenoate Composition In The Water Column And Sediment: Possible Implications For Sea Surface Temperature Estimates In Paleoceanography, Joan O. Grimalt, Jürgen Rullkötter, Marie-Alexandrine Sicre, Roger Summons, John Farrington, H. Rodger Harvey, Miguel Goñi, Ken Sawada

OES Faculty Publications

The literature pertaining to C37 alkenone and C37 and C38 alkenoate production and diagenesis has been reviewed and evaluated for issues that might jeopardize their usefulness in paleotemperature estimation. We also examined the use of the C37 alkenones as paleoproductivity indicators, the stability of their δ13C isotopic compositions, and their incorporation into the nonsolvent extractable organic matter fraction. Biological transformation of organic matter by bacteria and zooplankton does not appear to cause significant changes to the ratio of C37:2 and C37:3 alkenones, but there are major alterations in the relative composition of alkenoates. Studies of water column processes and postdepositional …

Fall 2000, Nsu Oceanographic Center

Currents

No abstract provided.

Copper Complexation And Speciation In The Western South And Equatorial Atlantic Ocean, John A. Consolvo

Chemistry & Biochemistry Theses & Dissertations

Presented here are the first data on copper complexation and speciation in the South Atlantic Ocean. Samples were collected at six vertical profile stations and along the surface (1m) transect during the 1996 IOC Baseline Contaminant Survey. Copper complexation measurements were made for the surface transect (1m) samples and three of the six vertical profile stations (1m - ~500m) using differential pulse anodic stripping voltammetry (DPASV) with a thin mercury film, rotating glassy carbon disk electrode (TMFRGCDE).

A strong organic copper complexing ligand (L₁; log K' _cuL1/cu2+ > 11. 8 ± 0 .4) was detected in 57% of all …

A Balanced Nitrogen Budget Of The Surface Layer Of The Southern Ross Sea, Antarctica, Walker O. Smith Jr.

VIMS Articles

To understand marine biogeochemical cycles, it is critical to quantitatively balance organic matter transformations within the euphotic zone. Such an assessment for nitrogen is difficult because of lateral advection, uncertainties in individual measurements, the complexity of elemental transformations (including nitrification and denitrification), and the difficulty of collecting data on appropriate space and time scales. Two cruises were conducted to the southern Ross Sea, Antarctica, to understand the time-varying fluxes of nitrogen into its various pools. From these data a balanced inventory was constructed. Nitrate removal in the upper 200 m was balanced by particulate and dissolved organic nitrogen production, ammonification, …

A New Autonomous Underwater Vehicle For Imaging Research, C. Roman, O. Pizarro, R. Eustice, H. Singh

Christopher N. Roman

Currently, unmanned underwater vehicles either tend to be cumbersome and complex to run, or operationally simple, but not quite suitable platforms for deep water imaging. This paper presents an alternative design in the form of a new low cost and easier to use autonomous underwater vehicle (AUV) for imaging research. The objective of the vehicle is to serve as a readily available and operationally simple tool that allows rapid testing of imaging algorithms in areas such as photomosaicking, 3D image reconstruction from a single camera, image based navigation, and multi-sensor fusion of bathymetry and optical data. These are all current …

Alteration Processes Of Alkenones And Related Lipids In Water Columns And Sediments, H. Rodger Harvey

OES Faculty Publications

Alkenones produced by the haptophyte algae are currently being used as indices of sea surface temperature in recent and past ocean environments, but limited information is available concerning the impact of biotic and abiotic processes on the integrity of these long chain lipids. This synthesis provides selected background information on major alteration processes that must be considered before such indices can be used with confidence. A number of processes in the water column and surface sediments have the potential to impact the structural integrity of alkenones and compromise their ability as temperature markers. Processes discussed include the alteration of alkenone …

Advances In Fusion Of High Resolution Underwater Optical And Acoustic Data, H. Singh, C. Roman, L. Whitcomb, D. Yoerger

Christopher N. Roman

We report efforts to merge data from the complementary modalities of optical and acoustic sensing for obtaining more accurate representations of the seafloor. We show that the principal obstacles to merging the acoustic and optical imaging modalities are the distortions inherent to each modality. The construction of geometrically accurate photomosaics is dominated by incremental errors arising as individual images are scaled and warped to form the photomosaic. For microbathymetric mapping, principal errors arise from sensor position and orientation calibration parameters that affect our ability to construct maps from sonar data that are commensurate with sensor and navigation resolution. We show …

Charting Neptune's Realm: From Classical Mythology To Satellite Imagery (Exhibit Guide), Osher Map Library And Smith Center For Cartographic Education

Osher Map Library Miscellaneous Publications

Charting Neptune's Realm: From Classical Mythology to Satellite Imagery. April 4, 2000 to January 11, 2001

The charts in this exhibition explore how mariners have distinguished one piece of water from any other, by determining what phenomena can be delineated across the vast, trackless ocean and by developing notations to express those phenomena.

Spring 2000, Nsu Oceanographic Center

Currents

No abstract provided.

A Longitudinal Assessment Of Temperament In Octopus Bimaculoides, David Loyd Sinn

Dissertations and Theses

Cephalopods, including Octopus spp., are highly intelligent molluscs that play major roles in many marine food webs, both as top-level feeders (Ambrose, 1984) as well as by constituting a major source of protein for the animals above them (Lang, Hochberg, Ambrose, & Engle, 1997). They also are fascinating organisms for behavioral studies, with elaborate repertoires of behavior based on plasticity and learning (Wells, 1962a; 1962b; 1978) which in complexity rivals that of the vertebrates. The study of individual differences in behavior is a facet of behavioral research that has recently gained attention in the literature (Gosling & John, 1999). Traditionally, …

2000 Hampton Roads Station Tide Prediction Calendars, Virginia Institute Of Marine Science, David A. Evans

Miscellaneous

These calendars are produced monthly using David Evans' Tidecal.

On The Seasonal Mixed Layer Simulated By A Basin-Scale Ocean Model And The Mellor-Yamada Turbulence Scheme, Tal Ezer

CCPO Publications

Seasonal changes and vertical mixing processes in the upper layers of the North Atlantic Ocean are simulated with a basin-scale sigma coordinate ocean model that uses the Mellor-Yamada turbulence closure scheme. The cause of insufficient surface mixing and a too shallow summertime thermocline, common problems of ocean models of this type, is investigated in detail by performing a series of sensitivity experiments with different surface forcing conditions and different turbulence parameterizations. A recent improvement in the parameterization of the dissipation term in the Mellor-Yamada turbulence scheme, which has shown a significant improvement in one-dimensional calculations, had a positive but relatively …

Blending Hf Radar And Model Velocities In Monterey Bay Through Normal Mode Analysis, B. L. Lipphardt Jr., A. D. Kirwan Jr., C. E. Grosch, J. K. Lewis, J. D. Paduan

CCPO Publications

Nowcasts of the surface velocity field in Monterey Bay are made for the period August 1-9, 1994, using HF radar observations blended with results from a primitive equation model. A spectral method called normal mode analysis was used. Objective spatial and temporal filtering were performed, and stream function, velocity potential, relative vorticity, and horizontal divergence were calculated over the domain. This type of nowcasting permits global spectral analysis of mode amplitudes, calculation of enstrophy, and additional analyses using tools like empirical orthogonal functions. The nowcasts reported here include open boundary flow information from the numerical model. Nowcasts using no open …

2000 Gloucester Point Station Tide Prediction Calendars, Virginia Institute Of Marine Science, David A. Evans

Miscellaneous

These calendars are produced monthly using David Evans' Tidecal.

2000 Wachapreague Station Tide Prediction Calendars, Virginia Institute Of Marine Science, David A. Evans

Miscellaneous

These calendars are produced monthly using David Evans' Tidecal.

Can An Optical Plankton Counter Produce Reasonable Estimates Of Zooplankton Abundance And Biovolume In Water With High Detritus?, X. Zhang, M. Roman, A. Sanford, H. Adolf, C. Lascara, R. Burgett

CCPO Publications

The Optical Plankton Counter (OPC) has been used in oceanic and fresh waters to estimate zooplankton abundance and biovolume. However, it is not clear whether the OPC can produce accurate estimates of zooplankton abundance and biovolume in waters with high detritus. In order to test the capability of the OPC to estimate zooplankton abundance and biovolume in Chesapeake Bay, two sets of laboratory experiments were conducted using water with high detritus concentrations collected from the upper Choptank estuary of Chesapeake Bay and laboratory cultured Artemia. Our results suggest that the OPC is able to produce accurate estimates of zooplankton biovolume …

Soapbox: The Academic Research Fleet: An Exciting Time For Renewal, Larry Atkinson

CCPO Publications

(First Paragraph) Academic research ships in the United States are the envy of many scientists around the world. A great strength of our system is the diversity of ships and operators: users have a choice, the system can change. A weakness of the system is that very diversity: sometimes it is hard for us to act together. Nevertheless, we now must act together. The vitality of the academic fleet in the coming decades is at stake. The reason is simply because many of our ships, especially in the intermediate size range, will soon reach the end of their useful life.

Iron And Manganese In The Ross Sea, Antarctica: Seasonal Iron Limitation In Antarctic Shelf Waters, Peter N. Sedwick, Giacomo R. Ditullio, Denis J. Mackey

OES Faculty Publications

Dissolved iron and manganese and total dissolvable iron were measured in water column samples from the Polynya Region of the southern Ross Sea in cruises in Nov.-Dec. 1994 (spring 1994) and Dec. 1995 to Jan. 1996 (summer 1995). Iron and manganese addition bottle incubation experiments were also performed on these cruises to assess the nutritional sufficiency of ambient iron and manganese concentrations for phytoplankton growth. Generally high dissolved iron concentrations (>0.5 nM) and relatively complex iron and manganese vertical profiles were obtained in spring 1994 vs. summer 1995. Dissolved iron concentrations in the upper water column averaged 1.0 nM …

Estuarine Relationships Between Zooplankton Community Structure And Trophic Gradients, Gyung Soo Park, Harold G. Marshall

Biological Sciences Faculty Publications

Zooplankton and water quality parameters were investigated at eight mesohaline stations in the lower Chesapeake Bay and Elizabeth River from January through December 1994 to identify the changes of zooplankton community structure with increased eutrophication. The total micro- and mesozooplankton biomass decreased with the increase of eutrophication. However, the relative proportion of microzooplankton increased with increased eutrophication. Within highly eutrophied waters, the small oligotrichs (m) and rotifers dominated the total zooplankton biomass (as carbon). However, tintinnids, copepod nauplii and mesozooplankton significantly decreased with the increase of eutrophication. These patterns were consistent throughout the seasons and had significant relationships statistically. These …

Population Dynamics Of The Smooth Dogfish, Mustelus Canis, In The Northwest Atlantic, Christina L. Conrath

Dissertations, Theses, and Masters Projects

No abstract provided.

The Effects Of Light And Nitrate Levels On The Relationship Between Nitrate Reductase Activity And (No3-)-N-15 Uptake: Field Observations In The East China Sea, Chin-Chang Hung, George T. F. Wong, Kom-Kee Liu, Fuh-Kwo Shiah, Gwo-Ching Gong

OES Faculty Publications

Nitrate reductase activity (NRA) and ¹⁵NO₃- uptake (NU) were determined in the East China Sea and the adjoining Kuroshio in May 1996, at six stations covering a range of hydrographic conditions: the nutrient-rich and fresher plume of Changjiang Diluted Water along the Chinese coast, the nutrient-rich upwelling Kuroshio Subsurface Water at the shelf edge northeast of Taiwan, the oligotrophic Kuroshio Surface Water and the mixing zones among these water masses on the shelf. The values of NRA in the surface mixed layer ranged between 16 and 0.1 nM-N h^-1, whereas those of NU ranged between …

Intraspecific Variation In The Selenium Requirement Of Different Geographic Strains Of The Toxic Dinoflagellate Gymnodinium Catenatum, Martina A. Doblin, Susan I. Blackburn, Gustaaf M. Hallegraeff

OES Faculty Publications

The requirement for selenium (IV) was assessed in five strains of the toxic dinoflagellate Gymnodinium catenatum Graham, representing three populations from Tasmania (Australia), as well as one each from Japan and Spain. Strains were grown in nutrient-enriched sea water medium with 10^-9 M selenium added as selenite (H₂SeO₃), or with no added selenium, and monitored for growth and cell yield. Strains exhibited different selenium (Se) requirements, as evidenced by (i) a decrease in exponential growth rate (10-20%) and cell yield (up to 80%) (Japanese strain); (ii) a decrease in cell yield only (Tasmania Derwent Estuary …

The Maine Shore And The Army Corps: A Tale Of Two Harbors, Wells And Saco, Maine, Joseph Kelley, Walter Anderson

Maine Policy Review

By discussing the problems of beach erosion and sand movement at Wells and Saco, Maine, Joseph Kelley and Walter Anderson demonstrate how single-minded, engineering approaches to complex, interdisciplinary coastal issues can create bigger problems than previously existed. As Kelley and Anderson explain, at both Wells and Camp Ellis, the Army Corps of Engineers was brought in to construct a harbor at no local cost to the community. This was accomplished by constructing jetties, and the result has been a persistent and serious problem of beach erosion. Over the years, the Army Corps has offered further technical solutions that have served …

Fortnightly Variability In The Transverse Dynamics Of A Coastal Plain Estuary, Arnoldo Valle-Levinson, Kuo-Chuin Wong, Kamazima M. M. Lwiza

CCPO Publications

Current velocity and water density profiles were obtained along two crossestuary transects with the purpose of determining the fortnightly variability of the transverse dynamics in a partially stratified coastal plain estuary. The profiles were measured with a towed acoustic Doppler current profiler and a conductivity-temperaturedepth recorder in the James River estuary, Virginia. The cross-estuary transects were sampled during the spring tides of October 26-27, 1996, and the ensuing neap tides of November 2-3, 1996. The transects were-4 km long, featured a bathymetry that consisted of a channel flanked by shoals, and were sampled repeatedly during two semidiurnal tidal cycles (25 …

Measurements Of Salinity In The Coastal Ocean: A Review Of Requirements And Technologies, Catherine Woody, Eddie Shih, Jerry Miller, Thomas Royer, Larry P. Atkinson, Richard S. Moody

CCPO Publications

Salinity, a measure of the dissolved salts in seawater, is a fundamental property of seawater and basic to understanding biological and physical processes in coastal waters. In the open ocean long term salinity measurements are identified as necessary to understand global climate studies, hydrological cycle, and circulation. In the coastal oceans, information on salinity is critical to understanding biological effects on ecosystem function such as disease, nursery grounds, or harmful algal blooms and on physical processes such as freshwater runoff estuarine mixing, and coastal currents. While the importance of salinity is recognized, little attention has been given to making routine …

The Human Factor In Size Selectivity In The Sea Scallop, Placopecten Magellanicus Fishery, Arman O. Kaltayev

Dissertations, Theses, and Masters Projects

No abstract provided.

Assessment Of Spawning And Nursery Habitat Suitability For American Shad (Alosa Sapidissima) In The Mattaponi And Pamunkey Rivers, Donna Marie Bilkovic

Dissertations, Theses, and Masters Projects

Delineation of essential fish habitat is particularly difficult for migratory fish which utilize large expanses of habitat throughout their life history. This study's main objective was the development and evaluation of habitat assessment tools for the early life stages of American shad (Alosa sapidissima) in two coastal plain rivers. to accomplish this, shad spawning and larval nursery habitats were delineated in the Mattaponi and Pamunkey rivers using presence of eggs and larvae (1997--1999) as evidence of habitat use. A watershed habitat assessment protocol was developed and used to rate habitat based on hydrographic, physical habitat, shoreline and land use parameters. …

Osteology, Phylogeny, And Biogeography Of The Marine Fish Family Ephippidae (Perciformes, Acanthuroidei), With Comments On Sister Group Relationships, Martin Ray Cavalluzzi

Dissertations, Theses, and Masters Projects

The marine fish family Ephippidae comprises eight genera and 15 species of extant fishes. Spadefishes or batfishes inhabit nearshore tropical to temperate waters. They are almost circumglobal in distribution, with the highest diversity in the Indo-west Pacific and the lowest diversity in the east Pacific and west Atlantic. Fifty-nine potentially informative morphological characters, 10 outgroup taxa, and eight ingroup taxa (i.e., genera) were used to explore sister group hypotheses to the Ephippidae, as well as generate a phylogeny of the Ephippidae. Seven constraint tree analyses were utilized to examine various sister group hypotheses based on previous morphological and molecular analyses …

Application Of Genetic Markers To Provide Species Identification And Define Stock Structure: Analyses Of Selected Marine Fishes Of The Mid -Atlantic Bight, Jan F. Cordes

Dissertations, Theses, and Masters Projects

Molecular markers and techniques were employed to develop a genetic key for the forensic identification of 16 species of Chesapeake Bay sportfishes and to investigate the stock structure of one of those species, the weakfish Cynoscion regalis. Regions within the ATP synthetase 6 (ATPase 6), Cytochrome b , cytochrome c oxidase I, NADH dehydrogenase 4 (ND4), and 12S/16S ribosomal RNA mitochondrial genes were amplified using the polymerase chain reaction (PCR) and digested with a bank of restriction endonucleases to find a genetic marker that exhibited complete interspecific differentiation and low intraspecific variation. Complete separation of all sixteen species was accomplished …