Physical Sciences and Mathematics Commons^™

Molecular Mechanism Of Cyanobacteria Circadian Clock Oscillator And Effect Of Co Factors On Its Oscillation, Manpreet Kaur

Dissertations

The circadian rhythms arise as an adaptation to the environmental 24-hour day and night cycle due to Earth's rotation. These rhythms prepare organisms to align their internal biological activities and day to day behavior or events with the environmental change of the 24-hour day and night cycle. Circadian rhythms are found widely in all living kingdoms of life on Earth. Cyanobacteria are photosynthetic prokaryotes which first used to study these circadian rhythms. Among cyanobacterial species, Synechococcus elongatus PCC 7942 (henceforth, S. Elongatus) is the simplest organism with a durable and sturdy circadian clock and is study as a model organism. …

Coordination, Adaptation, And Complexity In Decision Fusion, Weiqiang Dong

Dissertations

A parallel decentralized binary decision fusion architecture employs a bank of local detectors (LDs) that access a commonly-observed phenomenon. The system makes a binary decision about the phenomenon, accepting one of two hypotheses (H0 (“absent”) or H1 (“present”)). The k 1 LD uses a local decision rule to compress its local observations yk into a binary local decision uk; uk = 0 if the k 1 LD accepts H0 and uk = 1 if it accepts H1. The k 1 LD sends its decision uk over a noiseless dedicated channel to a Data Fusion Center (DFC). The DFC combines the …

Drone-Assisted Emergency Communications, Di Wu

Dissertations

Drone-mounted base stations (DBSs) have been proposed to extend coverage and improve communications between mobile users (MUs) and their corresponding macro base stations (MBSs). Different from the base stations on the ground, DBSs can flexibly fly over and close to MUs to establish a better vantage for communications. Thus, the pathloss between a DBS and an MU can be much smaller than that between the MU and MBS. In addition, by hovering in the air, the DBS can likely establish a Line-of-Sight link to the MBS. DBSs can be leveraged to recover communications in a large natural disaster struck area …

A Deep Machine Learning Approach For Predicting Freeway Work Zone Delay Using Big Data, Abdullah Shabarek

Dissertations

The introduction of deep learning and big data analytics may significantly elevate the performance of traffic speed prediction. Work zones become one of the most critical factors causing congestion impact, which reduces the mobility as well as traffic safety. A comprehensive literature review on existing work zone delay prediction models (i.e., parametric, simulation and non-parametric models) is conducted in this research. The research shows the limitations of each model. Moreover, most previous modeling approaches did not consider user delay for connected freeways when predicting traffic speed under work zone conditions. This research proposes Deep Artificial Neural Network (Deep ANN) and …

Supporting User Interaction And Social Relationship Formation In A Collaborative Online Shopping Context, Yu Xu

Dissertations

The combination of online shopping and social media allow people with similar shopping interests and experiences to share, comment, and discuss about shopping from anywhere and at any time, which also leads to the emergence of online shopping communities. Today, more people turn to online platforms to share their opinions about products, solicit various opinions from their friends, family members, and other customers, and have fun through interactions with others with similar interests. This dissertation explores how collaborative online shopping presents itself as a context and platform for users' interpersonal interactions and social relationship formation through a series of studies. …

Dances And Escape Of The Vortex Quartet, Brandon Behring

Dissertations

This dissertation considers the linear stability of a one-parameter family of periodic solutions of the four-vortex problem known as 'leapfrogging' orbits. These solutions, which consist of two pairs of identical yet oppositely-signed vortices, were known to W. Gröbli (1877) and A. E. H. Love (1883) and can be parameterized by a dimensionless parameter related to the geometry of the initial configuration. Simulations by Acheson and numerical Floquet analysis by Tophøj and Aref both indicate, to many digits, that the bifurcation occurs at a value related to the inverse square of the golen ratio. Acheson observed that, after an initial period …

Characterizing Reactive Iron Mineral Coatings And Their Roles In Natural Attenuation At A Site With Historical Contamination, Han Hua

Dissertations

Reactive iron mineral coatings in redox transition zones play an important role in contaminant attenuation. These mineral coatings include poorly crystalline to crystalline iron sulfides, carbonates, and oxyhydroxides, and are a signature of the biogeochemical processes occurring. To better understand these processes, reactive iron mineral coatings are characterized in an 18-m Anaerobic Core collected from a contaminated industrial site. This study targets redox transition zones uncovered in the core. A suite of complementary analyses is applied to distinguish the surface coating mineralogy using X-ray Diffraction, X-ray fluorescence, and field-emission scanning electron microscopy (FESEM) with energy dispersive X-ray analyzer (EDX). In …

The Aging And Impacts Of Atmospheric Soot: Closing The Gap Between Experiments And Models, Ogochukwu Yvonne Enekwizu

Dissertations

The main goal of this dissertation is to generate data and parameterizations to accurately represent soot aerosols in atmospheric models. Soot from incomplete combustion of fossil fuels and biomass burning is a major air pollutant and a significant contributor to climate warming. The environmental impacts of soot are strongly dependent on the particle morphology and mixing state, which evolve continuously during atmospheric transport via a process known as aging. To make predictions of soot impacts on the environment, most atmospheric models adopt simplifications of particle structure and mixing state, which lead to substantial uncertainties. Using an experimentally constrained modeling approach, …

Performance Optimization Of Big Data Computing Workflows For Batch And Stream Data Processing In Multi-Clouds, Huiyan Cao

Dissertations

Workflow techniques have been widely used as a major computing solution in many science domains. With the rapid deployment of cloud infrastructures around the globe and the economic benefits of cloud-based computing and storage services, an increasing number of scientific workflows have migrated or are in active transition to clouds. As the scale of scientific applications continues to grow, it is now common to deploy various data- and network-intensive computing workflows such as serial computing workflows, MapReduce/Spark-based workflows, and Storm-based stream data processing workflows in multi-cloud environments, where inter-cloud data transfer oftentimes plays a significant role in both workflow performance …

Modeling Mass Transfer And Chemical Reaction In Industrial Nitrocellulose Manufacturing Processes, Francis Patrick Sullivan

Dissertations

A series of models are proposed to describe the production of military grade nitrocellulose from dense cellulose materials in mixtures of nitric acid, sulfuric acid, and water. This effort is conducted to provide a predictive capability for analyzing the rate and extent of reaction achieved under a range of reaction conditions used in the industrial nitrocellulose manufacturing process for sheeted cellulose materials. Because this capability does not presently exist, nitrocellulose producers have historically relied on a very narrow range of cellulose raw materials and resorted to trial and error methods to develop processing conditions for new materials. This tool enables …

Small-Scale Dynamics Of Photospheric Magnetic Activities And Their Chromospheric Responses, Jiasheng Wang

Dissertations

The evolution of photospheric magnetic fields is considered as the fundamental source of forming atmospheric structures and triggering most solar activities, including flares and mass ejections on various scales (CMEs, jets, etc.). With the implementation of high-resolution observational instruments, small-scale details of magnetic features are recognized that can provide important information regarding the evolution in active regions and the connection between photospheric magnetic reconnection and jet-like ejections in the quiet Sun. This research takes advantage of the exceptionally high-resolution measurements of vector magnetic field and imaging observations by the Goode Solar Telescope, and UV/EUV imaging observations from space-based instruments. The …

Countering Internet Packet Classifiers To Improve User Online Privacy, Sina Fathi-Kazerooni

Dissertations

Internet traffic classification or packet classification is the act of classifying packets using the extracted statistical data from the transmitted packets on a computer network. Internet traffic classification is an essential tool for Internet service providers to manage network traffic, provide users with the intended quality of service (QoS), and perform surveillance. QoS measures prioritize a network's traffic type over other traffic based on preset criteria; for instance, it gives higher priority or bandwidth to video traffic over website browsing traffic. Internet packet classification methods are also used for automated intrusion detection. They analyze incoming traffic patterns and identify malicious …

Novel Applications Of Mass Spectrometry For Quantitation And Reaction Mechanism Elucidation, Pengyi Zhao

Dissertations

Mass spectrometry (MS) has been growing as one of the most widely used tools in the field of analytical chemistry. Various applications have been developed to harness the high sensitivity and specificity of mass spectrometric analysis. In this dissertation, two major challenges are addressed. By developing mass spectrometric-based methods, absolute quantitation of proteins/peptides have been achieved. Elucidation of various reaction mechanisms are also enabled. These are the focuses of this dissertation.

In Chapters 2 to 4, a novel quantitation method is developed, titled as coulometric mass spectrometry (CMS). The strength of this method is that no reference standard or isotope-labeled …

Treated Hfo2 Based Rram Devices With Ru, Tan, Tin As Top Electrode For In-Memory Computing Hardware, Yuvraj Dineshkumar Patel

Theses

The scalability and power efficiency of the conventional CMOS technology is steadily coming to a halt due to increasing problems and challenges in fabrication technology. Many non-volatile memory devices have emerged recently to meet the scaling challenges. Memory devices such as RRAMs or ReRAM (Resistive Random-Access Memory) have proved to be a promising candidate for analog in memory computing applications related to inference and learning in artificial intelligence. A RRAM cell has a MIM (Metal insulator metal) structure that exhibits reversible resistive switching on application of positive or negative voltage. But detailed studies on the power consumption, repeatability and retention …

Development Of Novel Membranes For Nanocarbon Enhanced Separation With Application In Biofuels And Solvent Recover, Oindrila Gupta

Dissertations

Pharmaceutical industries historically have had one of the highest amounts of solvent waste generated per unit of drug manufactured. Energy requirements and carbon footprint of current solvent recycling processes tend to be quite high, and the incineration of the solvents for waste disposal produces toxic air emissions. Also, rapidly increasing demand for energy and strict regulation on engine pollutant emissions have necessitated the use of alcohol as carbon-neutral fuels. Thermal distillation is one of the most common methods for the separation of alcohol-water mixtures. However, its application is limited due to energy requirements and high operating costs, and heating to …

Convergence Of The Boundary Integral Method For Interfacial Stokes Flow, Keyang Zhang

Dissertations

Boundary integral numerical methods are among the most accurate methods for interfacial Stokes flow, and are widely applied. They have the advantage that only the boundary of the domain must be discretized, which reduces the number of discretization points and allows the treatment of complicated interfaces. Despite their popularity, there is no analysis of the convergence of these methods for interfacial Stokes flow. In practice, the stability of discretizations of the boundary integral formulation can depend sensitively on details of the discretization and on the application of numerical filters. A convergence analysis of the boundary integral method for Stokes flow …

Accelerating Transitive Closure Of Large-Scale Sparse Graphs, Sanyamee Milindkumar Patel

Theses

Finding the transitive closure of a graph is a fundamental graph problem where another graph is obtained in which an edge exists between two nodes if and only if there is a path in our graph from one node to the other. The reachability matrix of a graph is its transitive closure. This thesis describes a novel approach that uses anti-sections to obtain the transitive closure of a graph. It also examines its advantages when implemented in parallel on a CPU using the Hornet graph data structure.

Graph representations of real-world systems are typically sparse in nature due to lesser …

Blast Shock-Wave Characterization In Experimental Shock Tubes, Sudeepto Kahali

Dissertations

Blast-induced traumatic brain injuries have affected U.S. soldiers deployed for extended periods in the gulf and Afghanistan wars. To identify the biomechanical and biochemical mechanisms of injury, critical in the identification of diagnostic and therapeutic tools, compressed gas-driven shock tubes are used by investigators to study shockwave-animal specimen interactions and its biological consequences. However, shock tubes are designed and operated in a variety of geometry with a range of process parameters, and the quality of shock wave characteristics relevant to field conditions and therefore the study of blast-induced traumatic brain injuries suffered by soldiers is affected by those conditions. Lab-to-lab …

Semantic, Integrated Keyword Search Over Structured And Loosely Structured Databases, Xinge Lu

Dissertations

Keyword search has been seen in recent years as an attractive way for querying data with some form of structure. Indeed, it allows simple users to extract information from databases without mastering a complex structured query language and without having knowledge of the schema of the data. It also allows for integrated search of heterogeneous data sources. However, as keyword queries are ambiguous and not expressive enough, keyword search cannot scale satisfactorily on big datasets and the answers are, in general, of low accuracy. Therefore, flat keyword search alone cannot efficiently return high quality results on large data with structure. …

Distributed Load Testing By Modeling And Simulating User Behavior, Chester Ira Parrott

LSU Doctoral Dissertations

Modern human-machine systems such as microservices rely upon agile engineering practices which require changes to be tested and released more frequently than classically engineered systems. A critical step in the testing of such systems is the generation of realistic workloads or load testing. Generated workload emulates the expected behaviors of users and machines within a system under test in order to find potentially unknown failure states. Typical testing tools rely on static testing artifacts to generate realistic workload conditions. Such artifacts can be cumbersome and costly to maintain; however, even model-based alternatives can prevent adaptation to changes in a system …

Inventory Of Rock Glaciers In The American West And Their Topography And Climate, Allison Reese Trcka

Dissertations and Theses

Rock glaciers are flowing geomorphic landforms composed of an ice/debris mixture. A uniform rock glacier classification scheme was created for the western continental US, based on internationally recognized criteria, to merge the various regional published inventories. A total of 2249 rock glaciers (1564 active, 685 inactive) and 7852 features of interest were identified in 10 states (WA, OR, CA, ID, NV, UT, ID, MT, WY, CO, NM). Sulfur Creek rock glacier in Wyoming is the largest active rock glacier (2.39 km²). The mean area and elevation for active and inactive rock glaciers are 0.18 km², 3384 …

Cat Tracks – Tracking Wildlife Through Crowdsourcing Using Firebase, Tracy Ho

Master's Projects

Many mountain lions are killed in the state of California every year from roadkill. To reduce these numbers, it is important that a system be built to track where these mountain lions have been around. One such system could be built using the platform-as-a-service, Firebase. Firebase is a platform service that collects and manages data that comes in through a mobile application. For the development of cross-platform mobile applications, Flutter is used as a toolkit for developers for both iOS and Android. This entire system, Cat Tracks is proposed as a crowdsource platform to track wildlife, with the current focus …

A Neat Approach To Malware Classification, Jason Do

Master's Projects

Current malware detection software often relies on machine learning, which is seen as an improvement over signature-based techniques. Problems with a machine learning based approach can arise when malware writers modify their code with the intent to evade detection. This leads to a cat and mouse situation where new models must constantly be trained to detect new malware variants. In this research, we experiment with genetic algorithms as a means of evolving machine learning models to detect malware. Genetic algorithms, which simulate natural selection, provide a way for models to adapt to continuous changes in a malware families, and thereby …

Leveraging The Inductive Bias Of Large Language Models For Abstract Textual Reasoning, Christopher Michael Rytting

Theses and Dissertations

Large natural language models (such as GPT-2 or T5) demonstrate impressive abilities across a range of general NLP tasks. Here, we show that the knowledge embedded in such models provides a useful inductive bias, not just on traditional NLP tasks, but also in the nontraditional task of training a symbolic reasoning engine. We observe that these engines learn quickly and generalize in a natural way that reflects human intuition. For example, training such a system to model block-stacking might naturally generalize to stacking other types of objects because of structure in the real world that has been partially captured by …

Natural And Synthetic Ligand-Binding Induce Different Pilin Assemblies In Vitro And Control P. Aeruginosa Bioactivities In Vivo, And Development Of Bacterial-Motility Enabled Binding Assays, Arizza Chiara Siwa Ibañez

Dissertations - ALL

Proteins found on bacterial cells surfaces are capable of sensing and transducing signals from the environment to elicit a biological response. Fibrous appendages formed by assembly of pilin proteins on P. aeruginosa are surface proteins that are necessary for host colonization, adhesion on abiotic surfaces, controlling motilities, formation of biofilm, horizontal gene transfer and virulence production of the bacterium. Upon contact with stimuli, pili appendages extend and retract on the cell surface, driven by the assembly and disassembly of pili at inner membrane of the bacteria cells. The dynamic response of this protein assembly is likely caused by a conformational …

Spectroscopic Study Of Ices With Astrophysical Interest, Shahnewaz M. Emtiaz

Dissertations - ALL

In this thesis, I investigate the physical and chemical processes of simulated cosmic dust grainsand planetary surface analogues in laboratory experiments performed at the Syracuse University Astrophysics and Surface Science Laboratory. I have studied the mid-infrared (Mid-IR) bands of thin films of pure CH4 ices and of CH4 ices mixed with N2 and H2O in order to characterize the thermal evolution of ices in confined geometry and to improve the understanding of observations of ices present in interstellar space and in outer solar system bodies. Furthermore, I studied the self-diffusion of CO2 isotopes in different thin-film arrangements. Mid-IR laboratory data …

Characterization Of Crystalline Pigments With Low-Frequency Vibrational Spectroscopy And Solid-State Density Functional Theory, Elyse M. Kleist

Dissertations - ALL

Although historical pigments are seldom found in the modern artist’s palette, their characterization is a critical aspect of designing effective conservation and restoration protocols, establishing provenance, and detecting forgeries. Ideal characterization methods are nondestructive, noninvasive, and able to distinguish between pure and mixed pigment samples. Spectroscopic techniques are commonly used to identify pigment composition because of their non-ionizing nature, rapid acquisition times, and safety. Unfortunately, the majority of these methods have difficulty distinguishing between pigments with similar chemical and physical properties. Recent advancements in instrument technology have increased the broader availability of terahertz time-domain spectroscopy (THz-TDS) and low-frequency Raman spectroscopy …

Atmospheric Chemistry Of Outdoor And Indoor Environments: Physical And Chemical Characterization Of Urban Grime And Measurements Of Oxidants In Vehicle Cabins, Corey Richard Kroptavich

Dissertations - ALL

This work investigates chemistry in two distinct environments in urban atmospheres. The first is the coatings found on urban surfaces often referred to as urban grime. Urban grime may serve as an important medium for photochemical and heterogeneous reactions in cities. This study characterized the composition and physical state of urban grime collected from two American cities. Wavelength-resolved extinction spectra of urban grime samples were also analyzed to improve our understanding of urban grime’s role in photochemistry. The research showed that the grime from the American cities was similar in composition to previous studies conducted in Europe and Canada, but …

Modeling Intra-Annual Variation In Coral Extension Rate Using Multiproxy Geochemical Records From Pacific Corals, Jessie Mccraw

Theses - ALL

The relationship between coral growth and environmental parameters is not straightforward, and few studies have explored intra-annual changes in extension rate. Variations in the magnitude and timing of intra-annual extension could be influenced by various environmental parameters such as sea surface temperature (SST), light and nutrient availability, turbidity or salinity stress, as well as by inter-annual climate variations such as the El Niño-Southern Oscillation (ENSO). In this study we use SST proxy data from Porites spp. corals to model intra-annual growth using an iterative numerical model comparing growth and temperature sine functions to measured Sr/Ca data to find the best …

Lidar Object Detection Utilizing Existing Cnns For Smart Cities, Vinay Ponnaganti

Master's Projects

As governments and private companies alike race to achieve the vision of a smart city — where artificial intelligence (AI) technology is used to enable self-driving cars, cashier-less shopping experiences and connected home devices from thermostats to robot vacuum cleaners — advancements are being made in both software and hardware to enable increasingly real-time, accurate inference at the edge. One hardware solution adopted for this purpose is the LiDAR sensor, which utilizes infrared lasers to accurately detect and map its surroundings in 3D. On the software side, developers have turned to artificial neural networks to make predictions and recommendations with …