Physical Sciences and Mathematics Commons^™

Modified Control Software For Imaging Ultracold Atomic Clouds, Dwight L. Whitaker, A. Sharma, J. M. Brown

Pomona Faculty Publications and Research

A charge-coupled device (CCD) camera capable of taking high-quality images of ultracold atomic samples can often represent a significant portion of the equipment costs in atom trapping experiment. We have modified the commercial control software of a CCD camera designed for astronomical imaging to take absorption images of ultracold rubidium clouds. This camera is sensitive at 780 nm and has been modified to take three successive 16-bit images at full resolution. The control software can be integrated into a Matlab graphical user interface with fitting routines written as Matlab functions. This camera is capable of recording high-quality images at a …

Teaching Time Savers: Some Advice On Giving Advice, Michael E. Orrison Jr.

All HMC Faculty Publications and Research

There are always a lot of questions that need to be answered at the beginning of a course. When are office hours? What are the grading policies? How many exams will there be? Will late homework be accepted? We have all seen the answers to these sorts of questions form the bulk of a standard course syllabus, and most of us feel an obligation (and rightly so) to provide such information.

Strings, Chains, And Ropes, Darryl H. Yong

All HMC Faculty Publications and Research

Following Antman [Amer. Math. Mon., 87 (1980), pp. 359–370], we advocate a more physically realistic and systematic derivation of the wave equation suitable for a typical undergraduate course in partial differential equations. To demonstrate the utility of this derivation, three applications that follow naturally are described: strings, hanging chains, and jump ropes.

Emergence Of The Fuzzy Horizon Through Gravitational Collapse, Anand Murugan '07, Vatche Sahakian

All HMC Faculty Publications and Research

For a large enough Schwarzschild black hole, the horizon is a region of space where gravitational forces are weak; yet it is also a region leading to numerous puzzles connected to stringy physics. In this work, we analyze the process of gravitational collapse and black hole formation in the context of light-cone M-theory. We find that, as a shell of matter contracts and is about to reveal a black hole horizon, it undergoes a thermodynamic phase transition. This involves the binding of D0 branes into D2’s, and the new phase leads to large membranes of the size of the horizon. …

Summing Cubes By Counting Rectangles, Arthur T. Benjamin, Jennifer J. Quinn, Calyssa Wurtz

All HMC Faculty Publications and Research

No abstract provided in this article.

Self-Avoiding Walks And Fibonacci Numbers, Arthur T. Benjamin

All HMC Faculty Publications and Research

By combinatorial arguments, we prove that the number of self-avoiding walks on the strip {0, 1} × Z is 8F_n − 4 when n is odd and is 8F_n − n when n is even. Also, when backwards moves are prohibited, we derive simple expressions for the number of length n self-avoiding walks on {0, 1} × Z, Z × Z, the triangular lattice, and the cubic lattice.

How Effective Is Security Screening Of Airline Passengers?, Susan E. Martonosi, Arnold Barnett

All HMC Faculty Publications and Research

With a simple mathematical model, we explored the antiterrorist effectiveness of airport passenger prescreening systems. Supporters of these systems often emphasize the need to identify the most suspicious passengers, but they ignore the point that such identification does little good unless dangerous items can actually be detected. Critics often focus on terrorists' ability to probe the system and thereby thwart it, but ignore the possibility that the very act of probing can deter attempts at sabotage that would have succeeded. Using the model to make some preliminary assessments about security policy, we find that an improved baseline level of screening …

Certifications Offered By Cost Estimating Organizations, Donald S. Remer, Karen M. Ahle, Kevin J. Alley, John Silny, Karen Hsin

All HMC Faculty Publications and Research

There has been an increasing trend in professional and engineering circles to place greater emphasis on official credentials. These credentials commonly come in the form of certificates – documented recognition by a professional body that an engineer or other professional has the qualifications and technical knowledge to be a practitioner in that field. These certificates are somewhat analogous to merit badges in scouting – the certification is evidence that the holder has a certain minimum level of competence in the subject area. This review will help you decide what certifications are applicable to you and the requirements to obtain a …

Teaching Time Savers: Style Points, Michael E. Orrison Jr.

All HMC Faculty Publications and Research

When I began as an assistant professor, I had a pretty good sense of how much time it would take for me to prepare for each class. After a few conversations with my new colleagues, I even had a good sense of how much time I should devote to tasks like office hours and committee work. Somewhere in the middle of grading my first exam, though, it became painfully clear that I had underestimated the amount of time I would need to grade exams!

Mean Field Effects For Counterpropagating Traveling Wave Solutions Of Reaction-Diffusion Systems, Andrew J. Bernoff, R. Kuske, B. J. Matkowsky, V. Volpert

All HMC Faculty Publications and Research

In many problems, e.g., in combustion or solidification, one observes traveling waves that propagate with constant velocity and shape in the x direction, say, are independent of y and z and describe transitions between two equilibrium states, e.g., the burned and the unburned reactants. As parameters of the system are varied, these traveling waves can become unstable and give rise to waves having additional structure, such as traveling waves in the y and z directions, which can themselves be subject to instabilities as parameters are further varied. To investigate this scenario we consider a system of reaction-diffusion equations with a …

Quadratic Forms And Height Functions, Lenny Fukshansky

CMC Faculty Publications and Research

The effective study of quadratic forms originated with a paper of Cassels in 1955, in which he proved that if an integral quadratic form is isotropic, then it has non-trivial zeros of bounded height. Here height stands for a certain measure of arithmetic complexity, which we will make precise. This theorem has since been generalized and extended in a number of different ways. We will discuss some of such generalizations for quadratic spaces over a fixed number field as well as over the field of algebraic numbers. Specifically, let K be either a number field or its algebraic closure, and …

Hole Dynamics In Polymer Langmuir Films, James C. Alexander, Andrew J. Bernoff, Elizabeth K. Mann, J. Adin Mann Jr., Lu Zou

All HMC Faculty Publications and Research

This article develops a model for the closing of a gaseous hole in a liquid domain within a two-dimensional fluid layer coupled to a Stokesian subfluid substrate, and compares this model to experiments following hole dynamics in a polymer Langmuir monolayer. Closure of such a hole in a fluid layer is driven by the line tension at the hole boundary and the difference in surface pressure within the hole and far outside it. The observed rate of hole closing is close to that predicted by our model using estimates of the line tension obtained by other means, assuming that the …

Role Of Beat Noise In Limiting The Sensitivity Of Optical Coherence Tomography, Richard C. Haskell, David Liao, Adam E. Pivonka, Tera L. Bell, Brendan R. Haberle, Barbara M. Hoeling, Daniel C. Petersen

All HMC Faculty Publications and Research

The sensitivity and dynamic range of optical coherence tomography (OCT) are calculated for instruments utilizing two common interferometer configurations and detection schemes. Previous researchers recognized that the performance of dual-balanced OCT instruments is severely limited by beat noise, which is generated by incoherent light backscattered from the sample. However, beat noise has been ignored in previous calculations of Michelson OCT performance. Our measurements of instrument noise confirm the presence of beat noise even in a simple Michelson interferometer configuration with a single photodetector. Including this noise, we calculate the dynamic range as a function of OCT light source power, and …

Teaching Time Savers: A Recommendation For Recommendations, Michael E. Orrison Jr.

All HMC Faculty Publications and Research

I admit it — I enjoy writing recommendation letters for my students. I like
learning about their hopes and dreams, where they have been and where they want to go. A recommendation letter is an opportunity to remind myself how much my students can grow while they are in college, and how much I have grown as an instructor, advisor, and mentor.

The Viscous Catenary, John Koulakis

Pomona Senior Theses

Variational techniques are used to develop a theory for the time evolution of a thin strand of viscous fluid suspended from two points. The shape of the strand is approximated to be a parabola and energy conservation is used to derive a differential equation modeling the change in height over time. Data is collected with a high resolution camera and a strobe light to obtain the position and shape of the strand over multiple intervals of time. Three very different and unexpected types of behaviors are observed depending on the initial thickness and shape of the filament. The approximation fits …

Investigation Of Carbon Nanotube Growth Using A Nozzle Cvd Method, James Mcfarland

Pomona Senior Theses

This work uses a modification of the chemical vapor deposition (CVD) technique to study the effects of source gas flow geometry (and the corresponding parameters) on carbon nanotube growth. Our approach is to flow the carbon-containing source gas through a nozzle, projecting the gas stream onto targeted regions of the substrate. This technique not only allows the potential for localized nanotube growth, but also offers an interesting opportunity to provide an experimental test of theoretical nanotube growth models.

The Local Gromov–Witten Invariants Of Configurations Of Rational Curves, Dagan Karp, Chiu-Chu Melissa Liu, Marcos Mariño

All HMC Faculty Publications and Research

We compute the local Gromov–Witten invariants of certain configurations of rational curves in a Calabi–Yau threefold. These configurations are connected subcurves of the “minimal trivalent configuration”, which is a particular tree of ℙ¹’s with specified formal neighborhood. We show that these local invariants are equal to certain global or ordinary Gromov–Witten invariants of a blowup of ℙ³ at points, and we compute these ordinary invariants using the geometry of the Cremona transform. We also realize the configurations in question as formal toric schemes and compute their formal Gromov–Witten invariants using the mathematical and physical theories of the …

Erratum: The Structure Of Alkali Halide Dimers: A Critical Test Of Ionic Models And New Ab Initio Results, T. Törring, S. Biermann, J. Hoeft, Richard J. Mawhorter, Robert J. Cave, C. Szemenyei

All HMC Faculty Publications and Research

It has come to our attention that some of the ab initio results presented are incorrect due to errors in the Cs and C1 basis sets, and a small error in the binding energy of Rb2F2. The corrected results are presented below for the species that were affected, modifying the results in Table III of the original paper. Only those values which are different from the results of the original Table III are included. Note that some of these results are used for comparison with the ionic models in later tables. In addition, some HF data quoted in Tables V …

The Linear Complexity Of A Graph, David L. Neel, Michael E. Orrison Jr.

All HMC Faculty Publications and Research

The linear complexity of a matrix is a measure of the number of additions, subtractions, and scalar multiplications required to multiply that matrix and an arbitrary vector. In this paper, we define the linear complexity of a graph to be the linear complexity of any one of its associated adjacency matrices. We then compute or give upper bounds for the linear complexity of several classes of graphs.

Transverse Priority Phase Sensitive Optical Coherence Tomography, Jeff Fingler, Jon Williams, Zahid Yaqoob, Changhuei Yang, Richard C. Haskell, Scott E. Fraser

All HMC Faculty Publications and Research

A variation on the standard time domain optical coherence tomography (TDOCT) system is presented. Using an inexpensive piezoelectric stack to modulate the reference mirror position, the amplitude and phase of the sample reflection is determined without scanning. With the primary scan in the transverse direction, en face and B-scan OCT images can be readily produced with phase information. This project plans to use the dynamic phase information to add an extra level of contrast to the images, based on the motion of the scatterers.

Spectral Analysis Of The Supreme Court, Brian L. Lawson, Michael E. Orrison, David T. Uminsky

All HMC Faculty Publications and Research

The focus of this paper is the linear algebraic framework in which the spectral analysis of voting data like that above is carried out. As we will show, this framework can be used to pinpoint voting coalitions in small voting bodies like the United States Supreme Court. Our goal is to show how simple ideas from linear algebra can come together to say something interesting about voting. And what could be more simple than where our story begins— with counting.

A Framework For Inclusive Teaching In Stem Disciplines, Lois Reddick, Wayne Jacobson, Angela Linse, Darryl Yong

All HMC Faculty Publications and Research

A wide body of literature exists recounting the ways in which inclusive teaching practices and principles benefit students and positively impact learning, student retention, and professional development across disciplines. However, STEM faculty do not readily accept the traditional approach of examining course content from multiple perspectives as relevant to their course content or useful in their teaching. In this chapter, we propose a Framework for Inclusive Teaching in STEM Disciplines that reflects the contexts of teaching in these disciplines, and extends James Banks’ Five Dimensions of Multicultural Education to the distinct needs of STEM faculty in their classes. We also …

Double Birthday Magic Square, Arthur T. Benjamin

All HMC Faculty Publications and Research

No abstract provided.

Combinatorial Interpretations Of Spanning Tree Identities, Arthur T. Benjamin, Carl R. Yerger

All HMC Faculty Publications and Research

We present a combinatorial proof that the wheel graph Wn has L2n − 2 spanning trees, where Ln is the nth Lucas number, and that the number of spanning trees of a related graph is a Fibonacci number. Our proofs avoid the use of induction, determinants, or the matrix tree theorem.

Some Promising Approaches To Tumor-Immune Modeling, Lisette G. De Pillis, Ami E. Radunskaya

All HMC Faculty Publications and Research

Mathematical models of tumor-immune interactions provide an analytical framework in which to address specific questions regarding tumor-immune dynamics. We present a brief summary of several approaches we are currently exploring to model tumor growth, tumor-immune interactions, and treatments. Results to date have shown that simulations of tumor growth using different levels of immune stimulating ligands, effector cells, and tumor challenge, are able to reproduce data from published studies. We additionally present some of our current efforts in the investigation of optimal control to aid in determining improved treatment strategies.

Spatial Tumor-Immune Modeling, Lisette G. De Pillis, D G. Mallet, Ami E. Radunskaya

All HMC Faculty Publications and Research

In this paper, we carry out an examination of four mechanisms that can potentially lead to changing morphologies in a growing tumor: variations in nutrient consumption rates, cellular adhesion, excessive consumption of nutrients by tumor cells and immune cell interactions with the tumor. We present numerical simulations using a hybrid PDE-cellular automata (CA) model demonstrating the effects of each mechanism before discussing hypotheses about the contribution of each mechanism to morphology change.

The Linking Probability Of Deep Spider-Web Networks, Nicholas Pippenger

All HMC Faculty Publications and Research

We consider crossbar switching networks with base b (that is, constructed from b x b crossbar switches), scale k (that is, with b^k inputs, b^k outputs, and b^k links between each consecutive pair of stages), and depth l (that is, with l stages). We assume that the crossbars are interconnected according to the spider-web pattern, whereby two diverging paths reconverge only after at least k stages. We assume that each vertex is independently idle with probability q, the vacancy probability. We assume that b ≥ 2 and the vacancy probability q are fixed, and that k …

An Optimal Brain Can Be Composed Of Conflicting Agents, Adi Livnat, Nicholas Pippenger

All HMC Faculty Publications and Research

Many behaviors have been attributed to internal conflict within the animal and human mind. However, internal conflict has not been reconciled with evolutionary principles, in that it appears maladaptive relative to a seamless decision-making process. We study this problem through a mathematical analysis of decision-making structures. We find that, under natural physiological limitations, an optimal decision-making system can involve “selfish” agents that are in conflict with one another, even though the system is designed for a single purpose. It follows that conflict can emerge within a collective even when natural selection acts on the level of the collective only.

The Motion Of A Thin Liquid Film Driven By Surfactant And Gravity, Michael Shearer, Rachel Levy

All HMC Faculty Publications and Research

We investigate wave solutions of a lubrication model for surfactant-driven flow of a thin liquid film down an inclined plane. We model the flow in one space dimension with a system of nonlinear PDEs of mixed hyperbolic-parabolic type in which the effects of capillarity and surface diffusion are neglected. Numerical solutions reveal distinct patterns of waves that are described analytically by combinations of traveling waves, some with jumps in height and surfactant concentration gradient. The various waves and combinations are strikingly different from what is observed in the case of flow on a horizontal plane. Jump conditions admit new shock …

Communicating Applied Mathematics: Four Examples, Daniel E. Finkel, Christopher Kuster, Matthew Lasater, Rachel Levy, Jill P. Reese, Ilse C. F. Ipsen

All HMC Faculty Publications and Research

Communicating Applied Mathematics is a writing- and speaking-intensive graduate course at North Carolina State University. The purpose of this article is to provide a brief description of the course objectives and the assignments. Parts A–D of of this article represent the class projects and illustrate the outcome of the course:

• The Evolution of an Optimization Test Problem: From Motivation to Implementation, by Daniel E. Finkel and Jill P. Reese

• Finding the Volume of a Powder from a Single Surface Height Measurement, by Christopher Kuster

• Finding Oscillations in Resonant Tunneling Diodes, by Matthew Lasater

• …