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Terrestrial and Aquatic Ecology Commons™
Open Access. Powered by Scholars. Published by Universities.®
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- Western Washington University (24)
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Articles 1 - 30 of 43
Full-Text Articles in Terrestrial and Aquatic Ecology
Cell Volume As A Determinant Of Virus-Mediated Population Growth In Ciliates, Jace Miller, John Paul Delong Phd
Cell Volume As A Determinant Of Virus-Mediated Population Growth In Ciliates, Jace Miller, John Paul Delong Phd
Honors Theses
Many protists and other small aquatic organisms consume virus particles, a behavior known as virovory. Some species of protists, such as the ciliate Halteria grandinella, can grow and divide using viruses as their sole food source. Other ciliate species have previously been shown to consume large quantities of viral particles, but it is unclear if they are able to support population growth with viruses alone. Because large ciliates have a higher energy demand, we hypothesize that they will be unable to support population growth on a virus-only diet. We fed nine ciliate species a diet of chloroviruses and found …
Mp765: Creating The Orono Bog Boardwalk: A Facility For Education, Research, And Recreation, Ronald B. Davis
Mp765: Creating The Orono Bog Boardwalk: A Facility For Education, Research, And Recreation, Ronald B. Davis
Miscellaneous Publications
A memoir by Dr. Ronald Davis detailing the creation of the Orono Bog Boardwalk. The Orono Bog Boardwalk is a premier destination in the Bangor/Orono area for persons wishing to experience the beauty and fascinating plants and animals of a Maine bog. The 1-mile boardwalk loop trail begins at the forested wetland edge in the Bangor City Forest, and after 800 feet crosses the Orono town line into the portion of the Orono Bog owned by the University of Maine. Along the way the boardwalk passes through a wide range of changing vegetation and environments on its way to the …
Refining The Coarse Filter Approach: Using Habitat-Based Species Models To Identify Rarity And Vulnerabilities In The Protection Of U.S. Biodiversity, Anne Davidson, Leah Dunn, Kevin Gergely, Alexa Mckerrow, Steven Williams, Mackenzie Case
Refining The Coarse Filter Approach: Using Habitat-Based Species Models To Identify Rarity And Vulnerabilities In The Protection Of U.S. Biodiversity, Anne Davidson, Leah Dunn, Kevin Gergely, Alexa Mckerrow, Steven Williams, Mackenzie Case
University Author Recognition Bibliography: 2021
Preserving biodiversity and its many components is a priority of conservation science and how to efficiently allocate resources to preserve healthy populations of as many species, habitats, and ecosystems as possible. We used the U.S. Geological Survey (USGS) Gap Analysis Project (GAP) species models released in 2018, which identify predicted habitats for terrestrial vertebrates in the conterminous United States, to illustrate hotspots of biodiversity for the major taxonomic groups. This collection represents the first complete compilation of terrestrial vertebrate species models for the conterminous United States (U.S. Geological Survey (USGS), 2018a). We used the species models but not the available …
Vignette 04: Olympia Oysters, Jodie Toft, Betsy Peabody
Vignette 04: Olympia Oysters, Jodie Toft, Betsy Peabody
Institute Publications
Olympia oysters (Ostrea lurida) are our only native oyster species here in the Salish Sea. Olympia oysters once covered an estimated 13-26% of the intertidal area in Puget Sound, mostly near the heads of inlets. A combination of overharvest, pollution, and habitat loss reduced the current population to less than 4% of historic numbers, though sparse numbers of Olympia oysters can still be found throughout most of their historic distribution. Looking to the future, as our region’s marine waters experience effects of climate change and ocean acidification (OA), native species such as the Olympia oyster may prove to …
Vignette 01: The Salish Sea Estuary System, Bert Webber
Vignette 01: The Salish Sea Estuary System, Bert Webber
Institute Publications
The Salish Sea is an estuarine ecosystem. Freshwater from land drainages mixes with the waters of the Pacific Ocean and results in water with a measurable, although sometimes small amount of freshwater. The Salish Sea is among the preeminent estuaries of North America. Estuarine circulation and flow are central to the high biological productivity in the Salish Sea.
Vignette 06: Living Shorelines In Puget Sound, Jason Toft
Vignette 06: Living Shorelines In Puget Sound, Jason Toft
Institute Publications
Nearly one third of Puget Sound’s shorelines are armored (e.g., seawall, bulkhead, riprap). Armoring has documented negative impacts on the flora and fauna that benefit from healthy intertidal beaches. Although shoreline armor may be necessary in some cases to protect people and property, there are often promising “living shoreline” options to restore natural features, also referred to as soft or green shorelines. These options can be applied to situations where complete restoration is either impractical or not feasible given human constraints. Living shoreline techniques often include a mix of design options, including armor removal, sediment nourishment of beaches, log placement, …
Vignette 15: Eelgrass Variations Ties To Sea Level Variations, Ronald Thom
Vignette 15: Eelgrass Variations Ties To Sea Level Variations, Ronald Thom
Institute Publications
This vignette shares an overview of the process and results of a long-term eelgrass monitoring effort at the mouth of Sequim Bay. Coupling these local long-term findings with research and monitoring across the Salish Sea and the globe will help better understand the longer-term effects of global warming and perhaps other human and natural-derived pressures on coastal ecosystems, and provide clues on how to make these systems more resilient to pressures.
Vignette 13: The Salish Sea Model, Tarang Khangaonkar P.E.
Vignette 13: The Salish Sea Model, Tarang Khangaonkar P.E.
Institute Publications
Given numerous concerns related to the health of the ecosystem and the possibility of anthropogenic impacts—from population growth to climate impacts, such as sea level rise—scientists, engineers, and planners seek an improved basic understanding of the biophysical behavior of the Salish Sea. The Salish Sea Model (SSM) development was motivated by this urgent need for a comprehensive predictive model that could diagnose water quality issues and concerns and serve as a planning tool in support of Puget Sound restoration efforts. The SSM was developed by the Pacific Northwest National Laboratory in collaboration with the Washington State Department of Ecology (Ecology) …
State Of The Salish Sea: Executive Summary, Kathryn L. Sobocinski
State Of The Salish Sea: Executive Summary, Kathryn L. Sobocinski
Institute Publications
This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …
Vignette 11: Ecological Consequences Of Built Shorelines In The Salish Sea, Stuart H. Munsch
Vignette 11: Ecological Consequences Of Built Shorelines In The Salish Sea, Stuart H. Munsch
Institute Publications
The world's population is disproportionately located near water. As a result, many nearshore ecosystems are highly modified. This is the case in the Salish Sea where many species rely on shoreline habitats. One of the major modifications to the Salish Sea's shoreline is armoring. Armored shorelines sever the connection between land and sea, preventing mutual exchange of nutrients and energy, influencing fish composition, and affecting photosynthetic species through overwater structures. By appreciating habitat impacts and how to mitigate them, we may steer toward a future that enables people and nearshore ecosystems to coexist. Restoring shorelines by removing armoring can recover …
Vignette 21: How Ecological Time-Series Inform Response To Stressors, Jackson W.F. Chu
Vignette 21: How Ecological Time-Series Inform Response To Stressors, Jackson W.F. Chu
Institute Publications
An important part of biodiversity monitoring includes assessing the differences in vulnerability across parts of an ecosystem. Hypoxia is one of the big three climate- related stressors causing biodiversity loss in the oceans. As the ocean warms, its capacity to hold oxygen becomes reduced. At the same time, concurrent shifts in circulation result in changes to how oxygen gets transported from the surface (where oxygen dissolves into the ocean) to the seafloor and from offshore to inshore areas. When a habitat experiences a substantial drop in oxygen, below the point needed to sustain everyday life, animals respond by migrating away, …
Vignette 19: Invasive European Green Crab, Jeff Adams, Emily Grason, P. Sean Mcdonald, Allen Pleus, Jude Apple, Roger Fuller, Lucas Hart, Alexandra Simpson
Vignette 19: Invasive European Green Crab, Jeff Adams, Emily Grason, P. Sean Mcdonald, Allen Pleus, Jude Apple, Roger Fuller, Lucas Hart, Alexandra Simpson
Institute Publications
European green crab pose documented threats to cultured and wild shellfish, eelgrass, and shoreline habitats and ecosystems. Because they can prey on juvenile crabs and shellfish, dense populations of EGC in the Salish Sea region could put fisheries and aquaculture resources in peril. After Fisheries and Oceans Canada researchers reported an established EGC population in Sooke Basin, BC in 2012, the Washington Department of Fish and Wildlife (WDFW) worked with Washington Sea Grant (WSG) to secure Puget Sound Marine and Nearshore Grant Program funding and establish a volunteer-based early detection and monitoring program. WSG launched Crab Team in 2015 with …
Vignette 14: Eelgrass Wasting Disease, Olivia Graham, Morgan Eisenlord, Drew Harvell
Vignette 14: Eelgrass Wasting Disease, Olivia Graham, Morgan Eisenlord, Drew Harvell
Institute Publications
Rising seawater temperatures can increase the risk of disease outbreaks in many taxa. Pathogens are potentially the ultimate keystone species in that their small biomass can have massive impacts that ripple through ecosystems. Disease outbreaks can be particularly damaging when they affect ecosystem engineers, such as seagrasses. Outbreaks of wasting disease in seagrasses are one of a myriad of stressors associated with declining temperate and tropical seagrass meadows around the globe. Levels of eelgrass wasting disease are high in the San Juan Islands and Puget Sound. These increasing levels of disease are a threat to sustainability of eelgrass meadows, our …
Section 1: Introduction, Kathryn L. Sobocinski
Section 1: Introduction, Kathryn L. Sobocinski
Institute Publications
Section 1 is an introduction to the report and the Salish Sea as a whole. The introduction provides an overview of the Salish Sea, the concept of "ecosystem health," and a roadmap to the rest of the report.
Vignette 17: Salish Sea Jellyfish, Correigh Greene
Vignette 17: Salish Sea Jellyfish, Correigh Greene
Institute Publications
The Salish Sea is home to a diverse community of gelatinous zooplankton (or "jellies"). In their adult forms, jellies comprise a relatively large proportion of biomass in the Salish Sea. Questions regarding jellyfish abundance and climate variation in the Salish Sea have been difficult to address, in part because of a lack of consistent monitoring. Research presented in this vignette suggests that jellyfish are sensitive to climate signals like marine water temperatures, but do not appear to be systematically increasing in abundance over time. Due to advances in modeling, we may gain a better perspective on the roles jellies play …
Section 3: Urbanization And Human Impacts To The Seascape, Kathryn L. Sobocinski
Section 3: Urbanization And Human Impacts To The Seascape, Kathryn L. Sobocinski
Institute Publications
Section 3 turns to an in-depth discussion of stressors and impacts to the ecosystem from population growth and urbanization, such as increases in impervious surfaces, hardening of shorelines, and the problems caused by a myriad of marine contaminants.
Section 2: Context, Kathryn L. Sobocinski
Section 2: Context, Kathryn L. Sobocinski
Institute Publications
Section 2 sets a foundation for understanding the Salish Sea ecosystem by describing its fundamental biophysical processes and structure, including estuarine circulation, ecological productivity, and an overview of several important biogenic habitats.
Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes
Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes
Institute Publications
Section 5 introduces cumulative effects and brings in brief case discussions focused on herring, salmon, and orcas. Understanding the layers of stressors the ecosystem faces is integral to gaining a full picture of declines in ecosystem function.
Vignette 08: Connection To Place: Indigenous Leadership In Səlilwət (Burrard Inlet), Tsleil-Waututh Nation’S Treaty Lands And Resources Department
Vignette 08: Connection To Place: Indigenous Leadership In Səlilwət (Burrard Inlet), Tsleil-Waututh Nation’S Treaty Lands And Resources Department
Institute Publications
Since time out of mind, Tsleil-Waututh have used and occupied Burrard Inlet and surrounding watersheds. Generations of Tsleil-Waututh people were brought up with the teaching, “When the tide went out, the table was set.” About 90% of our diet was once derived from Burrard Inlet and the Fraser River, but today the Inlet is unable to support our needs. Cumulative effects of colonial settlement and development have eroded the ecological health, integrity, and diversity of the Inlet. Tsleil-Waututh Nation (TWN) has a goal to restore the health of the Inlet so that we, and future generations of Tsleil-Waututh People, can …
Section 6: Opportunities For Improving Assessment And Understanding Of The Salish Sea, Kathryn L. Sobocinski
Section 6: Opportunities For Improving Assessment And Understanding Of The Salish Sea, Kathryn L. Sobocinski
Institute Publications
Section 6 offers a list of science-based needs and opportunities brought to light by the report and various existing efforts within the Salish Sea science community, representing opportunities for greater collaboration across geographic and jurisdictional boundaries.
Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski
Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski
Institute Publications
Section 4 shifts from the local impacts of urbanization to the locally realized impacts of global climate change, including ocean acidification and sea level rise, followed by evidence of climate change in the ecosystem, ranging from phytoplankton and kelp, to wetlands, salmon, and marine birds.
The State Of The Salish Sea, Kathryn L. Sobocinski
The State Of The Salish Sea, Kathryn L. Sobocinski
Institute Publications
This report synthesizes information on past, current, and emerging stressors within the Salish Sea estuarine ecosystem. The Salish Sea is a complex waterbody shared by Coast Salish Tribes and First Nations, Canada, and the United States. It is defined by multiple freshwater inputs and marine water from the Pacific Ocean that mix in two primary basins, Puget Sound and the Strait of Georgia. Human impacts are multifaceted and extensive within the Salish Sea, with a regional population of almost 9 million people. Population growth has driven urbanization and development, which in turn has triggered structural changes to the landscape and …
Vignette 09: Derelict Fishing Gear, Jason Morgan
Vignette 09: Derelict Fishing Gear, Jason Morgan
Institute Publications
Derelict fishing gear—nets, pots, and other gear lost during fishing operations or vessel transit—has been implicated in several aspects of degradation in the Salish Sea. Derelict gear can degrade marine habitats by scouring or preventing habitat access through accumulation of gear or by fundamentally altering habitats by trapping fine sediments and changing the substrate. Derelict gear has also been implicated in the deaths of countless fish, marine mammals, seabirds, and invertebrates in the Salish Sea. The issue of derelict fishing gear affects all reaches of the Salish Sea, albeit on different scales, and the Northwest Straits Initiative has provided its …
The Effect Of Changing Substrate On Arctic Aquatic Invertebrates Abundance, Tom Dolman
The Effect Of Changing Substrate On Arctic Aquatic Invertebrates Abundance, Tom Dolman
Michael D. Wilson Symposium
Climate change is directly affecting tundra ecosystems in northern regions, and warming temperatures have caused discontinuous permafrost and thawing sediments across the region. This project investigates how increasing erosion and the foraging patterns of migratory snow geese may degrade habitat for aquatic invertebrates in the upper Mast River, located in Wapusk National Park, Manitoba, Canada. In the past two decades, many of the important species of aquatic invertebrates have shown declines. Declining invertebrate populations are predicted to affect aquatic ecosystems and decrease the resources available to shorebirds and waterfowl, which breed and migrate through this area.
Global Connectivity Of Southern Ocean Ecosystems, Eugene J. Murphy, Nadine M. Johnston, Eileen E. Hofmann, Richard A. Phillips, Jennifer A. Jackson, Andrew J. Constable, Sian F. Henley, Jessica Melbourne-Thomas, Rowan Trebilco, Rachel D. Cavanagh, Geraint A. Tarling, Ryan A. Saunders, David K.A. Barnes, Daniel P. Costa, Stuart P. Corney, Ceridwen I. Fraser, Juan Höfer, Kevin A. Hughes, Chester J. Sands, Sally E. Thorpe, Philip N. Trathan, José C. Xavier
Global Connectivity Of Southern Ocean Ecosystems, Eugene J. Murphy, Nadine M. Johnston, Eileen E. Hofmann, Richard A. Phillips, Jennifer A. Jackson, Andrew J. Constable, Sian F. Henley, Jessica Melbourne-Thomas, Rowan Trebilco, Rachel D. Cavanagh, Geraint A. Tarling, Ryan A. Saunders, David K.A. Barnes, Daniel P. Costa, Stuart P. Corney, Ceridwen I. Fraser, Juan Höfer, Kevin A. Hughes, Chester J. Sands, Sally E. Thorpe, Philip N. Trathan, José C. Xavier
CCPO Publications
Southern Ocean ecosystems are globally important. Processes in the Antarctic atmosphere, cryosphere, and the Southern Ocean directly influence global atmospheric and oceanic systems. Southern Ocean biogeochemistry has also been shown to have global importance. In contrast, ocean ecological processes are often seen as largely separate from the rest of the global system. In this paper, we consider the degree of ecological connectivity at different trophic levels, linking Southern Ocean ecosystems with the global ocean, and their importance not only for the regional ecosystem but also the wider Earth system. We also consider the human system connections, including the role of …
Seagrass Blue Carbon Stocks And Sequestration Rates In The Colombian Caribbean, Oscar Serrano, Diana I. Gómez-López, Laura Sánchez-Valencia, Andres Acosta-Chaparro, Raul Navas-Camacho, Juan González-Corredor, Cristian Salinas, Pere Masque, Cesar A. Bernal, Núria Marbà
Seagrass Blue Carbon Stocks And Sequestration Rates In The Colombian Caribbean, Oscar Serrano, Diana I. Gómez-López, Laura Sánchez-Valencia, Andres Acosta-Chaparro, Raul Navas-Camacho, Juan González-Corredor, Cristian Salinas, Pere Masque, Cesar A. Bernal, Núria Marbà
Research outputs 2014 to 2021
Seagrass ecosystems rank amongst the most efficient natural carbon sinks on earth, sequestering CO2 through photosynthesis and storing organic carbon (Corg) underneath their soils for millennia and thereby, mitigating climate change. However, estimates of Corg stocks and accumulation rates in seagrass meadows (blue carbon) are restricted to few regions, and further information on spatial variability is required to derive robust global estimates. Here we studied soil Corg stocks and accumulation rates in seagrass meadows across the Colombian Caribbean. We estimated that Thalassia testudinum meadows store 241 ± 118 Mg Corg ha−1 (mean ± SD) in the top 1 m-thick soils, …
Factors Driving The Compositional Diversity Of Apis Mellifera Bee Venom From A Corymbia Calophylla (Marri) Ecosystem, Southwestern Australia, Daniela Scaccabarozzi, Kenneth Dods, Thao T. Le, Joel P. A. Gummer, Michele Lussu, Lynne Milne, Tristan Campbell, Ben Pan Wafujian, Colin Priddis
Factors Driving The Compositional Diversity Of Apis Mellifera Bee Venom From A Corymbia Calophylla (Marri) Ecosystem, Southwestern Australia, Daniela Scaccabarozzi, Kenneth Dods, Thao T. Le, Joel P. A. Gummer, Michele Lussu, Lynne Milne, Tristan Campbell, Ben Pan Wafujian, Colin Priddis
Research outputs 2014 to 2021
Bee venom (BV) is the most valuable product harvested from honeybees ($30 - $300 USD per gram) but marginally produced in apiculture. Though widely studied and used in alternative medicine, recent efforts in BV research have focused on its therapeutic and cosmetic applications, for the treatment of degenerative and infectious diseases. The protein and peptide composition of BV is integral to its bioactivity, yet little research has investigated the ecological factors influencing the qualitative and quantitative variations in the BV composition. Bee venom from Apis mellifera ligustica (Apidae), collected over one flowering season of Corymbia calophylla (Myrtaceae; marri) was characterized …
Impact Of Disturbance Regimes On Community And Landscape Biodiversity In Atlantic Coastal Pine Barren Ecoregion Streams, Sean T. Mccanty
Impact Of Disturbance Regimes On Community And Landscape Biodiversity In Atlantic Coastal Pine Barren Ecoregion Streams, Sean T. Mccanty
Graduate Doctoral Dissertations
Streams are dynamic systems shaped by geographic location, hydrology, riparian vegetation, and in-stream habitat. Furthermore, ecosystem disturbance plays a major role in structuring stream communities and ecosystem processes. Disturbances include natural occurrences, such as flooding, drought, and fire events and anthropogenic disturbances such as land use changes, damming, and pollution. Agricultural use acts as a press disturbance regime, homogenizing the surrounding landscape and simplifying in-stream habitat, leaving legacy effects after farming ceases. Active restoration is intended to ameliorate these effects by reintroducing variation, with the goal of shifting the ecosystem into a more diverse and natural state. The act of …
Population, Community And Food Web Impacts Of Hypoxia : A Synthesis Of Findings From Hood Canal, Timothy Essington
Population, Community And Food Web Impacts Of Hypoxia : A Synthesis Of Findings From Hood Canal, Timothy Essington
Salish Sea Ecosystem Conference
Hypoxia is a regular, yet increasingly prevalent feature of southern regions of Hood Canal, WA. While occasional fish kill events garner much public attention, these events are rare and may therefore may not be as important as effects from non-lethal levels of dissolved oxygen. Low levels (near 2 mg / l ) are common and species have a range of responses Here I use results from multiple investigations to illustrate the nature and magnitude of effects. On a population level, long lived sessile species like geoduck clams show clear evidence of substantial impacts from hypoxia. In addition, several sessile invertebrate …
Community Members Of All Ages Work Together To Reveal The Dynamic Nature Of Liberty Bay, Lauren Kemper, Markie Rodgers, Catherine Somerville, Melissa O'Brien, Charles Kleinwort, Sylvia Yang
Community Members Of All Ages Work Together To Reveal The Dynamic Nature Of Liberty Bay, Lauren Kemper, Markie Rodgers, Catherine Somerville, Melissa O'Brien, Charles Kleinwort, Sylvia Yang
Salish Sea Ecosystem Conference
At the SEA Discovery Center, we have begun a community citizen science project to monitor Liberty Bay, to gain a deeper sense of understanding and inspire stewardship of the local marine environment. As a public aquarium and marine science center serving the communities of the Kitsap Peninsula region, the SEA Discovery Center has the opportunity to engage the community in environmental science that no one person could do alone. Elementary students, college interns, volunteers, and visitors from the community are mentored by SEA Discovery Center staff to measure abiotic (seawater temperature, salinity, dissolved oxygen) and biotic (phytoplankton and zooplankton abundance …