Biotechnology Commons^™

Effect Of Superconsciousness External Energy On The Atomic, Crystalline And Powder Characterisitics Of “Carbon Allotrope Powders”, Mahendra Kumar Trivedi

Mahendra Kumar Trivedi

Scientists are searching for eluding link between spirituality and science. Some believe fundamental essences of universe to be energy and information. As per current understanding energy and matter always co- existed and is considered one and the same. Energy is consideredas ‘matter-inperpetual-motion’and matter as ‘stationary-energy’.Inter conversion between matter and energy has been defined by Einstein’s famous energy-mass equation (E=mc2) which has been provedby nuclear physicists using complex nuclear reactions involving high energy particles. However, many spiritual masters have claimed to realize this energy-matter inter conversion using their spiritual powers/energy but scientifically unknown and unverified. It is the first time that …

Genetic Effect Of The Dwarfing Genes On Some Culm Characteristics Associatcd With Lodging Resistance In Bread Wheat, Md. Mahbub Hasan

Md. Mahbub Hasan

Due to the challenge of screening traits related to lodging resistance under natural field conditions, selection for lodging resistant varieties in wheat breeding programs is difficult. The identification of easily measurable culm anatomical traits related to lodging resistance would simplify the selection process. The present study was conducted to determine the effect of dwarfing genes on culm anatomical traits related to lodging resistance in our of basal internode 1. Field and laboratory study was conducted in Shahjalal University of Science and Technology, Sylhet, Bangladesh with eight wheat genotypes having Rhr1, Rht2 dwarfing genes in them and a local land race …

Drosophila Adult Eye Model To Teach Scanning Electron Microscopy In An Undergraduate Cell Biology Laboratory, Meghana Tare, Oorvashi Roy Puli, Sarah M. Oros, Amit Singh

Biology Faculty Publications

We have devised an undergraduate laboratory exercise to study tissue morphology using fruit fly, Drosophila melanogaster, as the model organism. Drosophila can be reared in a cost effective manner in a short period of time. This experiment was a part of the undergraduate curriculum of the cell biology laboratory course aimed to demonstrate the use of scanning electron microscopy (SEM) technique to study the morphology of adult eye of Drosophila. The adult eye of Drosophila is a compound eye, which comprises of 800 unit eyes, and serves as an excellent model for SEM studies. We used flies that …

Applications Of Natural Products In The Control Of Mosquito-Transmitted Diseases, Jesse Hardin, Fatimah Linda Collier Jackson

Department of Biology Faculty Publications

Mosquito-transmitted diseases remain one of the most significant causes of mortality in the African continent, despite successes in controlling these diseases in other regions of the world. The disproportionate impact in areas of poverty suggests a need for control that is efficient and does not require complex technological control strategies. Focusing on the vectors of disease, the mosquito, there are many alternatives to synthetic, chemical pesticides that await discovery and development. Although some natural products have been described, there is still a need for continuing research that incorporates endogenous knowledge in the selection process for potential vector control candidates. Recent …

Applications Of Natural Products In The Control Of Mosquito-Transmitted Diseases, Jesse A. Hardin, Fatimah Linda Collier Jackson

Fatimah Linda Collier Jackson

Modeling In Microbial Batch Culture And Its Parameter Identification, Zhaohua Gong, Chongyang Liu, Enmin Feng

Chongyang Liu

In this paper, the nonlinear dynamical system of batch fermentation is investigated in the bioconversion of glycerol to 1,3-propanediol(1,3-PD) by Klebsiella pneumoniae. Taking account of the kinetic behavior and experimental results in the batch cultures, we propose a two-stage dynamical system to formulate the fermentation process. Then some properties of the proposed system are proved. In view of the big errors between observations and numerical simulation results, we subsequently establish a parameter identification model to identify parameters in the system. The identifiability of the model is also discussed. Finally, in order to find the optimal parameters of the identification model, …

Quantifying And Resolving Multiple Vector Transformants In S. Cerevisiae Plasmid Libraries, Thomas C. Scanlon, Elizabeth C. Gray, Karl E. Griswold

Dartmouth Scholarship

In addition to providing the molecular machinery for transcription and translation, recombinant microbial expression hosts maintain the critical genotype-phenotype link that is essential for high throughput screening and recovery of proteins encoded by plasmid libraries. It is known that Escherichia coli cells can be simultaneously transformed with multiple unique plasmids and thusly complicate recombinant library screening experiments. As a result of their potential to yield misleading results, bacterial multiple vector transformants have been thoroughly characterized in previous model studies. In contrast to bacterial systems, there is little quantitative information available regarding multiple vector transformants in yeast. Saccharomyces cerevisiae is the …

Isolation, Purification And Biochemical Characterization Of Lectin From Oyster Mushroom, Pleurotus Sajor-Caju., Rajesh Pati

Rajesh Pati

No abstract provided.

Metazoan Stress Granule Assembly Is Mediated By P-Eif2alpha-Dependent And -Independent Mechanisms, Natalie Farny, Nancy Kedersha, Pamela Silver

Natalie G. Farny

Stress granules (SGs) are cytoplasmic bodies wherein translationally silenced mRNAs are recruited for triage in response to environmental stress. We report that Drosophila cells form SGs in response to arsenite and heat shock. Drosophila SGs, like mammalian SGs, are distinct from but adjacent to processing bodies (PBs, sites of mRNA silencing and decay), require polysome disassembly, and are in dynamic equilibrium with polysomes. We further examine the role of the two Drosophila eIF2alpha kinases, PEK and GCN2, in regulating SG formation in response to heat and arsenite stress. While arsenite-induced SGs are dependent upon eIF2alpha phosphorylation, primarily via PEK, heat-induced …

Stranger In A Strange Land: Biotechnology And The Federal Circuit, Lawrence Sung

Lawrence M. Sung

No abstract provided.

Tyrosine Phosphorylation Events In Mouse Sperm Capacitation, Enid Arcelay

Open Access Dissertations

Mammalian sperm are not able to fertilize immediately upon ejaculation; they become fertilization-competent after undergoing changes in the female reproductive tract collectively termed capacitation. Although it has been established that capacitation is associated with an increase in tyrosine phosphorylation, little is known about the role of this event in sperm function. In this work we used a combination of two dimensional gel electrophoresis and mass spectrometry to identify proteins that undergo tyrosine phosphorylation during capacitation. Some of the identified proteins are the mouse orthologues of human sperm proteins known to undergo tyrosine phosphorylation. Among them we identified VDAC, tubulin, PDH …

Artificial Intelligence – Ii: Retinal Image Blood Vessel Segmentation, M. Usman Akram, Anam Tariq, Shoab A. Khan

International Conference on Information and Communication Technologies

The appearance and structure of blood vessels in retinal images play an important role in diagnosis of eye diseases. This paper proposes a method for segmentation of blood vessels in color retinal images. We present a method that uses 2-D Gabor wavelet to enhance the vascular pattern. We locate and segment the blood vessels using adaptive thresholding. The technique is tested on publicly available DRIVE database of manually labeled images which has been established to facilitate comparative studies on segmentation of blood vessels in retinal images. The proposed method achieves an area under the receiver operating characteristic curve of 0.963 …

Rapid Evolution Of Sex-Pheromone-Producing Enzyme In Drosophila, Troy R. Shirangi, Héloïse D. Dufour, Thomas M. Williams, Sean B. Carroll

Biology Faculty Publications

A wide range of organisms use sex pheromones to communicate with each other and to identify appropriate mating partners. While the evolution of chemical communication has been suggested to cause sexual isolation and speciation, the mechanisms that govern evolutionary transitions in sex pheromone production are poorly understood. Here, we decipher the molecular mechanisms underlying the rapid evolution in the expression of a gene involved in sex pheromone production in Drosophilid flies. Long-chain cuticular hydrocarbons (e.g., dienes) are produced female-specifically, notably via the activity of the desaturase DESAT-F, and are potent pheromones for male courtship behavior in Drosophila melanogaster. We …

Exposure To Ultraviolet Radiation Causes Proteomic Changes In Embryos Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Joseph Paul Campanale

Master's Theses

The amount of solar ultraviolet radiation (UVR, 290-400 nm) reaching Earth’s surface is increasing due to ozone depletion and global climate change. Embryos of the purple sea urchin, Strongylocentrotus purpuratus, provide an ideal system for examining how UVR affects developing marine organisms and cells in general. To model the protein-mediated cell cycle response to UV-irradiation, six batches of S. purpuratus embryos were exposed to UVR, monitored for delays in the first mitotic division and examined for global proteomic changes. Embryos from each batch were exposed to or protected from artificial UVR for 25 or 60 min. Embryos treated with …

Differential Cellular Responses To Metal Oxide Based Nanoparticles And Potential Biomedical Applications, Cory L. Hanley

Boise State University Theses and Dissertations

The multidisciplinary field of nanotechnology has allowed for unprecedented exploration and manipulation of molecular, sub-molecular, and atomic structures and advancements in this field are revolutionizing scientific thought and applications. Within the field of nanotechnology, the branch of nanobiotechnology focuses on studying the effects of nanomaterials on biological systems and to elucidate how nanomaterials interact with cells and cellular components. Nanoparticles are a particular type of nanomaterial whose dimensions measure 100 nanometers and are shown to possess unique size-dependent physical, chemical and biological properties compared to their bulk counterparts. Metal oxide nanoparticles, such as those made from ZnO, are a type …

The Effect Of Endothelin-1 On The Expression Of Cdk Inhibitors P21 & P27 In Bovine Corneal Endothelial Cells, Lakshmi Reddy Bollu

Masters Theses & Specialist Projects

Mammalian corneal endothelial cells are considered to be non-proliferative due to the arrest of cells at the G1 phase of the cell cycle. The purpose of this study was to determine whether the down regulation of cyclin dependant kinase inhibitors (p21cip1 and p27kip1) levels by Endothelin-1 (ET-1), would overcome the G1 phase arrest and promote cell cycle progression and proliferation in cultured BCECs (Bovine corneal endothelial cells). BCECs were isolated from bovine corneas and cultured in DMEM supplemented with 10% serum. 5-Bromo 2-deoxy Uridine (BrdU) incorporation was determined in serum starved cultures in 24-well plates as a measure of cell …

Final Report For The Link Energy Fellowship, A. Joe Shaw

Link Foundation Energy Fellowship Reports

A sustainable energy future is critical for environmental and strategic reasons. Fossil fuel use has increased greenhouse gas emissions, and continued consumption could adversely change global climate. In addition, the United States must rely on foreign petroleum suppliers, leading to unfavorable trade deficits, instability, and conflict.1 One leading alternative to petroleum used for transportation is ethanol derived from cellulosic biomass.2 A major barrier for biological-based biomass conversion is a cost effective method of releasing sugars from recalcitrant cellulosic biomass by enzymatic hydrolysis. Thermophilic, anaerobic bacteria offer a potential solution, as they produce efficient native hydrolytic enzymes.3 However, all thermophilic bacteria …

A Drosophila Resource Of Transgenic Rnai Lines For Neurogenetics, Quan Jian Ni, Lu Ping Liu, Richard Binari, Robert Hardy, Hye Seok Shim, Amanda Cavallaro, Matthew Booker, Barret D. Pfeiffer, Michele Markstein, Hui Wang, Christians Villalta, Todd R. Laverty, Lizabeth A. Perkins, Norbert Perrimon

Michele Markstein

Conditional expression of hairpin constructs in Drosophila is a powerful method to disrupt the activity of single genes with a spatial and temporal resolution that is impossible, or exceedingly difficult, using classical genetic methods. We previously described a method (Ni et al. 2008) whereby RNAi constructs are targeted into the genome by the phiC31-mediated integration approach using Vermilion-AttB-Loxp-Intron-UAS-MCS (VALIUM), a vector that contains vermilion as a selectable marker, an attB sequence to allow for phiC31-targeted integration at genomic attP landing sites, two pentamers of UAS, the hsp70 core promoter, a multiple cloning site, and two introns. As the level of …

Physical And Flow Properties Of Regular And Reduced Fat Distillers Dried Grains With Solubles (Ddgs), Vykundeshwari Ganesan, Kurt A. Rosentrater, Kasiviswanathan Muthukumarappan

Kurt A. Rosentrater

With the remarkable growth of the US fuel ethanol industry in the past decade, large quantities of corn-based distillers dried grains with solubles (DDGS) are now being produced. Flowability of DDGS has become a problem throughout the industry, as it is often restricted by caking and bridging during storage and transport. The objective of this study was to quantify physical and flow properties of commercially produced unmodified (9.3% db fat) and reduced fat (2.1% db) DDGS to determine if fat level affects flowability. The compressive modulus of reduced fat DDGS was 28.2% higher than unmodified DDGS, but shear stress resistance …

Extrusion Studies Of Aquaculture Feed Using Distillers Dried Grains With Solubles And Whey, Nehru Chevanan, Kasiviswanathan Muthukumarappan, Kurt A. Rosentrater

Kurt A. Rosentrater

Three isocaloric (3.5 kcal/g) ingredient blends containing 20, 30, and 40% distiller-dried grains with solubles (DDGS) along with 5% whey were prepared with a net protein content adjusted to 28% (wet basis [wb]). Other ingredients in the blends included soy flour, corn flour, fish meal, vitamin, and mineral mix. These blends were extruded in a single-screw extruder at 15, 20, and 25% (wb) moisture content and at 130 and 160 rpm screw speeds. Compared to previous research, the durability and unit density of the extrudates in this study were found to increase substantially by the addition of whey to the …

A Conserved Ccch-Type Zinc Finger Protein Regulates Mrna Nuclear Adenylation And Export, Natalie Farny, Jessica Hurt, Robert Obar, Steven Gygi, Pamela Silver, Bo Zhai

Natalie G. Farny

Coupling of messenger RNA (mRNA) nuclear export with prior processing steps aids in the fidelity and efficiency of mRNA transport to the cytoplasm. In this study, we show that the processes of export and polyadenylation are coupled via the Drosophila melanogaster CCCH-type zinc finger protein CG6694/dZC3H3 through both physical and functional interactions. We show that depletion of dZC3H3 from S2R+ cells results in transcript hyperadenylation. Using targeted coimmunoprecipitation and liquid chromatography mass spectrometry (MS)/MS techniques, we characterize interactions of known components of the mRNA nuclear export and polyadenylation machineries with dZC3H3. Furthermore, we demonstrate the functional conservation of this factor, …

Potential Role Of Micro-Algae On Global Energy Supply, Sage Callaway-Keeley, Stephanie Huynh

Student Research Posters

The most effective ways to reduce CO2 emissions are to improve the energy efficiency of each economic sector and to reduce the cutting of tropical and temperate forests around the world. These options, however, may not fully reach their technical and economic potential due to various political and socioeconomic. The most practical of these is to increase CO2 sinks through photosynthesis in both standing tree biomass and in ocean primary producers. The use of marine algae as CO2 sinks is for large-scale CO2 mitigation: the use of phytoplankton through Fe fertilization and macro algal (kelp) farms, which can be used …

Biofuels: A Hands-On Approach, Learning The Potential Of Utilizing Non-Food Sources, Alexandra Ham, Gabrielle Pecora, Hoaithuong Bui, Timothy Camarella, Victor Pham, Marc Ting

Student Research Posters

The global energy economy is huge and thoughts of replacing large amounts of petroleum based fuels by massive levels of fermentation of grains are not realistic. On an energy basis what global agriculture produces for food will almost cover the energy demands if all of it is redirected to the production of fuels—either as alcohols for gasoline or as fat derivatives for diesel fuel. This means that chemical processes need to be developed that allow inclusion of non-food based agricultural and urban wastes as well as forest debris into the energy economy. These represent opportunities to capture new sources of …

Altered Regulation Of Aquaporin Gene Expression In Allergen And Il-13-Induced Mouse Models Of Asthma, Carissa M. Krane, Bijia Deng, Venkateshwar Mutyam, Casey A. Mcdonald, Stephen Pazdziorko, Lawrence Mason, Samuel Goldman, Marion Kasaian, Divya Chaudhary, Cara Williams, Melisa W.Y. Ho

Biology Faculty Publications

IL-13 is known to affect many processes that contribute to an asthmatic phenotype, including inflammation, fibrosis, and mucus production. Members of the aquaporin (AQP) family of transmembrane water channels are targets of regulation in models of lung injury and inflammation. Therefore, we examined AQP mRNA and protein expression in allergen and IL-13-induced mouse models of asthma. Lungs from ovalbumin sensitized and ovalbumin challenged (OVA/OVA) and IL-13 treated mice showed airway thickening, increased mucus production, and pulmonary eosinophilia. Pulmonary function tests showed a significant increase in methacholine-induced airway hyperreactivity in OVA/OVA and IL-13-treated mice as compared with controls. Quantitative PCR analysis …

The Politics Of Genetically Modified Organisms: Global Rules, Local Needs, Ximena Gonzalez

Independent Study Project (ISP) Collection

Biotechnology in regards to agriculture is complex and cannot be judged by a single factor. Exporters of GM foods have their reasons for exportation, and importing countries have their reasons to accept them. There is not a unified reason for acceptance or rejection. Countries may accept or reject for economic, social, or political reasons. Other countries may accept or reject for environmental and/or health reasons. However, there is the inevitable factor of influence. Some countries like the United States, and supernational powers like the European Union are major elements to the decision making process of developing countries. When it comes …

System Architecture For An Intelligent Implantable Bio-Telemetry Device, Karthik Kumar Nattamai Kumaresan

UNLV Theses, Dissertations, Professional Papers, and Capstones

Biotelemetry has long been used for environmental and life science research to study animal populations and behavior. The use of implantable bio-telemetric techniques makes it possible to record and study physiological variables during long-term experiments with a minimum disturbance to the animal. Fully implantable telemetric techniques greatly reduce the risk of infection associated with leads and catheters protruding from the skin. In this research the design and implementation of a completely programmable bio-implantable digital system which can measure two physiological signals extended over a period of time is considered. The proposed system consists of a standalone implantable transmitter unit and …

Biodiesel: Tomorrow's Fuel, Today's Solution, Roberto J. Molina, Racheal A. Persuad

Undergraduate Research Conference

Study of physical and chemical properties of biodiesel fuels derived from poultry and plant fats.

Defining Behavioral And Molecular Differences Between Summer And Migratory Monarch Butterflies, Robert Gegear, Haisun Zhu, Amy Casselman, Sriramana Kanginakudru, Steven Reppert

Robert J. Gegear

Background: In the fall, Eastern North American monarch butterflies (Danaus plexippus) undergo a magnificent long-range migration. In contrast to spring and summer butterflies, fall migrants are juvenile hormone deficient, which leads to reproductive arrest and increased longevity. Migrants also use a time-compensated sun compass to help them navigate in the south/southwesterly direction en route for Mexico. Central issues in this area are defining the relationship between juvenile hormone status and oriented flight, critical features that differentiate summer monarchs from fall migrants, and identifying molecular correlates of behavioral state. Results: Here we show that increasing juvenile hormone activity to induce summer-like …

Motivation In Spinoza And Rosenzweig Or Transgressing The Boundaries Of A Rationally Constructed Self, Jules Simon

Jules Simon

No abstract provided.

Responding, Rather Than Reacting To, Race In Biomedical Research: A Response To Professors Caulfield And Mwaria, Michael J. Malinowski

Michael J. Malinowski

This Commentary is part of a colloquy on race-based genetics research.