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Articles 1 - 12 of 12

Full-Text Articles in Molecular Biology

Stochastic Modeling Of Neuronal Transport In Various Cellular Geometries, Abhishek Choudhary Mr., Peter Kramer May 2019

Stochastic Modeling Of Neuronal Transport In Various Cellular Geometries, Abhishek Choudhary Mr., Peter Kramer

Biology and Medicine Through Mathematics Conference

No abstract provided.


Effect Of Lead On Vma1 Atpase Gene Expression And Feeding Behavior In Tetrahymena Thermophila, Sarah Butler, Jazmine E. Townsend Apr 2019

Effect Of Lead On Vma1 Atpase Gene Expression And Feeding Behavior In Tetrahymena Thermophila, Sarah Butler, Jazmine E. Townsend

Carroll College Student Undergraduate Research Festival

Lead is an environmental toxin that has been sown to have deleterious effects on human health, including neurological defects, developmental delays, and bodily pain. The purpose of this experiment was to test whether prolonged exposure to lead altered expression of the VMA1 gene and feeding behavior in the model organism, Tetrahymena thermophila. The VMA1 gene encodes the protein VMA1 (Vacuolar Membrane ATPase) which assists in regulating active transport systems on the vacuolar membrane. We hypothesized that exposure of T. thermophila to lead would result in altered expression of the VMA1 gene and in the feeding behavior of these organisms. For ...


Investigating The Effect Of Phytosterol Concentration On The Des7 Gene And Feeding Behavior In Tetrahymena Thermophila, Nate Burman, Dylan Jones Apr 2019

Investigating The Effect Of Phytosterol Concentration On The Des7 Gene And Feeding Behavior In Tetrahymena Thermophila, Nate Burman, Dylan Jones

Carroll College Student Undergraduate Research Festival

This study examined the impact of phytosterols on DES7 gene expression and feeding behavior in Tetrahymena thermophila. Tetrahymena thermophila are single-celled protists that are often used as model organisms for studying basic processes of Molecular Biology. One major topic in Molecular Biology that has been extensively studied in Tetrahymena is the concept of gene regulation. Gene regulation helps determine whether a certain protein is produced, and this often depends on both the internal and external conditions of the organism. This project took a closer look at the way Tetrahymena process exogenous cholesterol molecules through the production of the DES7 enzyme ...


Effects Of Ethanol On The Gene Expression Of Uracil Dna N-Glycosylase 1 (Ung1) And Growth Rate In Tetrahymena Thermophila, Samantha Mundel, Seth Berkowitz Apr 2019

Effects Of Ethanol On The Gene Expression Of Uracil Dna N-Glycosylase 1 (Ung1) And Growth Rate In Tetrahymena Thermophila, Samantha Mundel, Seth Berkowitz

Carroll College Student Undergraduate Research Festival

Alcohol (ethanol) interferes with human health in a variety of ways such as heart damage, liver damage, and specifically, DNA damage. The purpose of this experiment is to explore the effects of ethanol on the growth rate and expression of the uracil DNA N-Glycosylase (UNG1 ) gene in Tetrahymena thermophila. It was hypothesized that expression of UNG1, the gene that codes for the enzyme uracil DNA N-Glycosylase, would increase and that growth rate would decrease in Tetrahymena cells exposed to ethanol. Previous studies suggest that UNG1 expression is increased when DNA is damaged. This enzyme is involved in base excision repair ...


Effect Of Turmeric On Oxidatively Stressed Tetrahymena Thermophila Cells, Logan Meeks, Luke R. Mcentee Apr 2019

Effect Of Turmeric On Oxidatively Stressed Tetrahymena Thermophila Cells, Logan Meeks, Luke R. Mcentee

Carroll College Student Undergraduate Research Festival

Reactive oxygen species (ROSs) are chemically reactive forms of oxygen that, within a cellular environment, form free radicals that interfere with cellular processes and damage DNA. ROSs are routinely produced during oxidative metabolic processes that occur within the mitochondria and their presence in the cell must be tightly regulated. The OXR1 gene encodes a protein that is essential to the degradation of ROSs primarily in the nucleus and in the mitochondria. In this study, we wanted to determine whether turmeric had a protective effect on ROS-induced oxidative stress through regulation of the OXR1 gene in the model organism Tetrahymena thermophila ...


Effect Of Bis (2-Ethylhexyl) Phthalate On Tetrahymena Thermophila Dcl-1 Gene Expression And Conjugation, Talya Vaira, Peyton Twete Apr 2019

Effect Of Bis (2-Ethylhexyl) Phthalate On Tetrahymena Thermophila Dcl-1 Gene Expression And Conjugation, Talya Vaira, Peyton Twete

Carroll College Student Undergraduate Research Festival

Phthalates, often referred to as plasticizers, are a group of chemicals used in hundreds of products including detergents, food packaging, and nail polish. Bis (2-ethylhexyl) phthalates (DEHP) have recently been shown to disrupt endocrine chemical balances, thereby causing reproductive strain. For this project, we wanted to explore how DEHP influences conjugation in Tetrahymena thermophila and to determine how DEHP exposure affects expression of the DCL-1 gene. The DCL-1 gene encodes the protein DCL-1 which is essential for transmitting genetic information during the process of conjugation in T. thermophila. We hypothesized that DEHP will act as a repressor of conjugation resulting ...


Pesticides And Parkinson's: An Investigation Of The Effect Of Roundup Exposure On Drosophila Melanogaster, Siobhan O'Neill Apr 2019

Pesticides And Parkinson's: An Investigation Of The Effect Of Roundup Exposure On Drosophila Melanogaster, Siobhan O'Neill

Carroll College Student Undergraduate Research Festival

From commercial farms to private households, Roundup is the most commonly used herbicide in the United States. In recent years, exposure to Roundup has been correlated with a variety of health problems including Celiac Disease, birth defects, kidney and liver diseases, Alzheimer's Disease, and Parkinson's Disease. To date, the use of Roundup has been banned or restricted in several foreign countries, including the Netherlands, Portugal, Germany and Italy, because it has been classified as a possible carcinogen by the World Health Organization. The goal of this research was to determine the effects of Roundup exposure on dopaminergic neurons ...


The Effects Of Roundup On Tetrahymena Thermophila Growth And Cytochrome P450 Gene Expression, Ethan Viles, Henry Walker Apr 2019

The Effects Of Roundup On Tetrahymena Thermophila Growth And Cytochrome P450 Gene Expression, Ethan Viles, Henry Walker

Carroll College Student Undergraduate Research Festival

Roundup is a very common herbicide in the United States, but has been linked to many detrimental health effects and was classified as ‘probably carcinogenic’ by the World Health Organization in 1994. Not much research has been done to elucidate the possible effects on non-cancer gene pathways.The goal of this project was to research the influence that exposure to Roundup has on the growth of Tetrahymena thermophila and the expression of the cytochrome p450 gene. It was hypothesized that Roundup exposure would change the expression of cytochrome p450 gene and would decrease the growth rate of Tetrahymena thermophila. Background ...


Cell Separation Delay And Membrane Trafficking Defects In Cdc42 Gap Mutants, Haylee Grace Young Apr 2019

Cell Separation Delay And Membrane Trafficking Defects In Cdc42 Gap Mutants, Haylee Grace Young

EURēCA: Exhibition of Undergraduate Research and Creative Achievement

Cytokinesis is the final step in cell division, where a cell separates into two daughter cells. Cytokinesis involves many steps that must be organized in a spatiotemporal manner. In many eukaryotes, it involves the assembly and constriction of an actomyosin ring. The fission yeast Schizosaccharomyces pombe serves as a good model system to study cytokinesis because they divide via actomyosin-dependent-cytokinesis.

The Rho-family of small GTPases are molecules involved in the regulation of cell growth and division. The GTPase Cdc42 helps promote timely onset of ring constriction and septum formation in fission yeast. Studies with many other organisms show that Cdc42 ...


Pilot Studies Of Two Possible Iron Uptake Mechanisms In Insect Cells, Michelle Coca Apr 2019

Pilot Studies Of Two Possible Iron Uptake Mechanisms In Insect Cells, Michelle Coca

Kansas State University Undergraduate Research Conference

Pilot Studies of Two Possible Iron Uptake Mechanisms in Insect Cells

Michelle E. Coca, Diana G. Najera, and Dr. Maureen J. Gorman

Department of Biochemistry and Molecular Biophysics

College of Arts and Sciences

Iron plays an important role in energy metabolism and other essential physiological processes; however, because iron can also be toxic, its uptake by cells must be strictly regulated. In humans, there is a well-understood pathway of iron uptake and multiple poorly understood pathways. How iron is transported into insect cells is unknown. The goal of this study was to test two models of iron uptake by cultured ...


Ultrafine Carbon Nanoparticles Activate Inflammasome Signaling And Cell Death In Murine Macrophages, Alexander Soloniuk, Hadley Lamascus, Jay Brewster, John Mann Mar 2019

Ultrafine Carbon Nanoparticles Activate Inflammasome Signaling And Cell Death In Murine Macrophages, Alexander Soloniuk, Hadley Lamascus, Jay Brewster, John Mann

Seaver College Research And Scholarly Achievement Symposium

Carbon black (CB) is the primary nanoparticulate component of air pollution from fossil fuel combustion. This work examines the cellular impact of ultrafine carbon (carbon black, CB) nanoparticles, that range in size down to 30 nm, upon murine macrophages. The size analysis of the carbon black nanoparticles was performed using atomic force microscopy (AFM) and transmission electron microscopy (TEM) techniques. RAW246.7 macrophage cells were exposed to CB doses ranging from 50 – 200 ug/ml in complete media. Analysis of cell survival over time revealed elevated rates of significant nuclear degradation and cell lifting after 48 hours of exposure, and ...


Large Scale Dynamical Model Of Macrophage/Hiv Interactions, Matthew M. Froid Mar 2019

Large Scale Dynamical Model Of Macrophage/Hiv Interactions, Matthew M. Froid

Student Research and Creative Activity Fair

Properties emerge from the dynamics of large-scale molecular networks that are not discernible at the individual gene or protein level. Mathematical models - such as probabilistic Boolean networks - of molecular systems offer a deeper insight into how these emergent properties arise. Here, we introduce a non-linear, deterministic Boolean model of protein, gene, and chemical interactions in human macrophage cells during HIV infection. Our model is composed of 713 nodes with 1583 interactions between nodes and is responsive to 38 different inputs including signaling molecules, bacteria, viruses, and HIV viral particles. Additionally, the model accurately simulates the dynamics of over 50 different ...