Life Sciences Commons^™

Infection Potential Of Rickettsia Felis Via Ingestion, Matthew M. Schexnayder

LSU Master's Theses

Rickettsia felis is the etiologic agent of flea-borne spotted fever (FBSF) in humans and a poorly described cause of fever in animals. It is transmitted by its primary arthropod vector and reservoir host, the cat flea Ctenocephalides felis. Known routes of Rickettsia felis transmission between Rickettsia felis-infected cat fleas and vertebrate hosts include cutaneous bites and contamination of cutaneous wounds with infective flea feces. The bulk of FBSF infections occur in young children in Africa, though infections of people at all ages all over the world have been confirmed. As mammals and young children frequently come into contact …

Amplification Dynamics Of Platy-1 Retrotransposons In The Cebidae Platyrrhine Lineage, Mark A. Batzer, Jessica M. Storer, Jackson R. Mierl, Sarah A. Brantley

Faculty Publications

Platy-1 elements are Platyrrhine-specific, short interspersed elements originally discovered in the Callithrix jacchus (common marmoset) genome. To date, only the marmoset genome has been analyzed for Platy-1 repeat content. Here, we report full-length Platy-1 insertions in other New World monkey (NWM) genomes (Saimiri boliviensis, squirrel monkey; Cebus imitator, capuchin monkey; and Aotus nancymaae, owl monkey) and analyze the amplification dynamics of lineage-specific Platy-1 insertions. A relatively small number of full-length and lineage-specific Platy-1 elements were found in the squirrel, capuchin, and owl monkey genomes compared with the marmoset genome. In addition, only a few older Platy-1 subfamilies were recovered in …

Analysis Of Baboon (Genus Papio) Population Structure Using Alu Insertion Polymorphisms, Corey St. Romain

Honors Theses

No abstract provided.

Computational Analysis Of Papionini Evolution Using Alu Insertions, Vallmer Edward Jordan Ii

LSU Doctoral Dissertations

Alu elements are primate specific retrotransposons that have remained active throughout the course of primate evolution. As a result of this sustained mobilization. Alu elements are present in greater copy number in primate genomes than any other transposable element. An average of over one million Alu elements has been identified in every sequenced haplorrhine genome to date. These characteristics qualify Alu elements as ideal characters for studying evolutionary relationship among primates.

The increasing availability of whole genome sequencing data presents novel challenges and opportunities for comparative genomic analyses. Genomic data is now publicly available for most primate species. Such an …

Defining A Species: A Look At The Relationship Of Papio And Theropithecus Using Alu Elements, Paulina Gonzalez-Quiroga

Honors Theses

No abstract provided.

Sine Language: Communicating Platy-1 Retrotransposon Propagation In The Aotus Lineage, Jackson Mierl

Honors Theses

No abstract provided.

An Analysis Of Alu Elements In Baboons, Cody James Steely

LSU Doctoral Dissertations

Transposable elements compose a large portion of mammalian genomes and are estimated to make up anywhere from ~45% - ~70% of the human genome. Alu elements are primate-specific retrotransposons that are found in high copy number (> 1 million copies) and are spread throughout the genome. These elements are the most commonly repeated sequence in the human genome and have contributed to a number of disease states in humans. Alu elements are useful markers for population genetics and phylogenetics and have proven valuable in understanding difficult to determine relationships between species and within populations.

Baboons (genus Papio) are spread throughout …

Secrets Of Sines: The Story Of Platy-1 Propagation In The Saimiri Lineage, Sarah Brantley

Honors Theses

No abstract provided.

Epigenetic Profiling Of Mammalian Retrotransposons, Arundhati Bakshi

LSU Doctoral Dissertations

Over evolutionary time, mammalian genomes have accumulated a large number of retrotransposons, making up about half of the genome in any given species. These retrotransposons are typically repressed by epigenetic mechanisms, one of the main ones being DNA methylation. It is well known that improper DNA methylation of retrotransposons can have unwanted consequences on nearby gene expression, and hypomethylation of retrotransposons has been frequently observed in various cancers. Nevertheless, it has been notoriously difficult to study retrotransposon loci individually due to the highly repetitive nature of their sequences. To address this issue, we have developed a novel protocol termed HT-TREBS …

Analysis Of Western Lowland Gorilla (Gorilla Gorilla Gorilla) Specific Alu Repeats, Thomas Beckstrom

Honors Theses

No abstract provided.

Evolution Of Alu Element Subfamilies In Papio Baboons, Jon Hunter Strohmeyer

Honors Theses

No abstract provided.

Evaluation Of Aflatoxin-Related Products From Ozonated Corn, Alfredo Domingo Prudente, Jr.

LSU Doctoral Dissertations

This study assessed the efficacy of the ozonation process in degrading aflatoxin in corn, and investigated the chemical reaction between aflatoxin and gaseous ozone. Ozonation (12-13 wt%) totally degraded aflatoxin B1 in a model system. Conversion of aflatoxin into polar compounds was observed during ozonolysis of 100 µg aflatoxin B1 in an aqueous environment and in solid form. Seven intermediate reaction products were separated by two-dimensional thin layer chromatography. HPLC analysis of ozonated AFB1 revealed the presence of six major peaks. MALDI-MS analysis detected compounds that have higher molecular weights than AFB1. The dichloromethane fraction contained compounds with molecular ion …