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Articles 1 - 30 of 54
Full-Text Articles in Life Sciences
Origins Of An Unmarked Georgia Cemetery Using Ancient Dna Analysis, Andrew T. Ozga, Raul Y. Tito, Brian M. Kemp, Hugh Matternes, Alexandra J. Obregon-Tito, Leslie Neal, Cecil M. Lewis Jr.
Origins Of An Unmarked Georgia Cemetery Using Ancient Dna Analysis, Andrew T. Ozga, Raul Y. Tito, Brian M. Kemp, Hugh Matternes, Alexandra J. Obregon-Tito, Leslie Neal, Cecil M. Lewis Jr.
Andrew Ozga
Determining the origins of those buried within undocumented cemeteries is of incredible importance to historical archaeologists and, in many cases, the nearby communities. In the case of Avondale Burial Place, a cemetery in Bibb County, Georgia, in use from 1820 to 1950, all written documentation of those interred within it has been lost. Osteological and archaeological evidence alone could not describe, with confidence, the ancestral origins of the 101 individuals buried there. In the present study, we used ancient DNA extraction methods in well-preserved skeletal fragments from 20 individuals buried in Avondale Burial Place to investigate the origins of the …
Hierarchical Modeling And Differential Expression Analysis For Rna-Seq Experiments With Inbred And Hybrid Genotypes, Andrew Lithio, Dan Nettleton
Hierarchical Modeling And Differential Expression Analysis For Rna-Seq Experiments With Inbred And Hybrid Genotypes, Andrew Lithio, Dan Nettleton
Dan Nettleton
The performance of inbred and hybrid genotypes is of interest in plant breeding and genetics. High-throughput sequencing of RNA (RNA-seq) has proven to be a useful tool in the study of the molecular genetic responses of inbreds and hybrids to environmental stresses. Commonly used experimental designs and sequencing methods lead to complex data structures that require careful attention in data analysis. We demonstrate an analysis of RNA-seq data from a split-plot design involving drought stress applied to two inbred genotypes and two hybrids formed by crosses between the inbreds. Our generalized linear modeling strategy incorporates random effects for whole-plot experimental …
Saccharomyces Genome Database & Uniprot Bioinformatics Analysis, Ray A. Enke
Saccharomyces Genome Database & Uniprot Bioinformatics Analysis, Ray A. Enke
Ray Enke Ph.D.
Assessment Of A Metaviromic Dataset Generated From Nearshore Lake Michigan, Siobhan C. Watkins, Neil Kuehnle, C Anthony Ruggeri, Kema Malki, Katherine Bruder, Jinan Elayyan, Kristina Damisch, Naushin Vahora, Paul O'Malley, Brianne Ruggles-Sage, Zachary Romer, Catherine Putonti
Assessment Of A Metaviromic Dataset Generated From Nearshore Lake Michigan, Siobhan C. Watkins, Neil Kuehnle, C Anthony Ruggeri, Kema Malki, Katherine Bruder, Jinan Elayyan, Kristina Damisch, Naushin Vahora, Paul O'Malley, Brianne Ruggles-Sage, Zachary Romer, Catherine Putonti
Catherine Putonti
Bacteriophages are powerful ecosystem engineers. They drive bacterial mortality rates and genetic diversity, and affect microbially mediated biogeochemical processes on a global scale. This has been demonstrated in marine environments; however, phage communities have been less studied in freshwaters, despite representing a potentially more diverse environment. Lake Michigan is one of the largest bodies of freshwater on the planet, yet to date the diversity of its phages has yet to be examined. Here, we present a composite survey of viral ecology in the nearshore waters of Lake Michigan. Sequence analysis was performed using a web server previously used to analyse …
Does Baylisascaris Procyonis Phylogeny Correlate With That Of The Raccoon (Procyon Lotor), Matthew E. Ingle, Stephen G. Dunbar, Jaynee L. Bartsch, Kyle J. Culbertson, Taylor A. Fulton, Katherine R. Guffey, Aubrey J. Juris, Ashlie N. Nolan, Daniel P. Nordquist, Carrie E. Rowlands, Joshua A. Sitler
Does Baylisascaris Procyonis Phylogeny Correlate With That Of The Raccoon (Procyon Lotor), Matthew E. Ingle, Stephen G. Dunbar, Jaynee L. Bartsch, Kyle J. Culbertson, Taylor A. Fulton, Katherine R. Guffey, Aubrey J. Juris, Ashlie N. Nolan, Daniel P. Nordquist, Carrie E. Rowlands, Joshua A. Sitler
Stephen Dunbar, PhD
Baylisacaris procyonis, commonly known as the raccoon roundworm, is a parasite that inhabits the small intestine of the North American raccoon (Procyon lotor). Although humans do not typically become the definitive host, humans can become infected through handling soil containing eggs. B. procyonis can induce serious health complications in cases of human infection, including degenerative retinal and behavioral changes, coma, and even death. High prevalence of B. procyonis in a raccoon population increases the probability of transference to human hosts. In our study, we analyzed the genetic structure of B. procyonis harvested from raccoons of southwestern Ohio, and compared this …
Does Baylisascaris Procyonis Impact Raccoon (Procyon Lotor) Genetics?, Matthew E. Ingle, Stephen G. Dunbar, Jaynee L. Bartsch, Kyle J. Culbertson, Taylor A. Fulton, Katherine R. Guffey, Aubrey J. Juris, Ashlie N. Nolan, Daniel P. Nordquist, Carrie E. Rowlands, Joshua A. Sitler
Does Baylisascaris Procyonis Impact Raccoon (Procyon Lotor) Genetics?, Matthew E. Ingle, Stephen G. Dunbar, Jaynee L. Bartsch, Kyle J. Culbertson, Taylor A. Fulton, Katherine R. Guffey, Aubrey J. Juris, Ashlie N. Nolan, Daniel P. Nordquist, Carrie E. Rowlands, Joshua A. Sitler
Stephen Dunbar, PhD
Raccoons (Procyon lotor) are the final host for raccoon roundworms (Baylisascaris procyonis). Raccoon roundworm is the leading cause of a dangerous neurological disease, known as larva migrans encephalopathy. Phylogenetic trees illustrate co-evolutionary events between species living in a symbiotic relationship with each other. Throughout the coevolution of host and parasite, many aspects of a population affect the way the members interact with one another and with symbiotic species. In order to evaluate the relationship between host and parasite in regards to diet, we isolated DNA from intestinal wall tissue, amplified a portion of exon 2 from MHC II, and sent …
Crispr-Cas9 Nuclear Dynamics And Target Recognition In Living Cells, Hanhui Ma, Li-Chun Tu, Ardalan Naseri, Maximiliaan Huisman, Shaojie Zhang, David Grünwald, Thoru Pederson
Crispr-Cas9 Nuclear Dynamics And Target Recognition In Living Cells, Hanhui Ma, Li-Chun Tu, Ardalan Naseri, Maximiliaan Huisman, Shaojie Zhang, David Grünwald, Thoru Pederson
David Grünwald
The bacterial CRISPR-Cas9 system has been repurposed for genome engineering, transcription modulation, and chromosome imaging in eukaryotic cells. However, the nuclear dynamics of clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein 9 (Cas9) guide RNAs and target interrogation are not well defined in living cells. Here, we deployed a dual-color CRISPR system to directly measure the stability of both Cas9 and guide RNA. We found that Cas9 is essential for guide RNA stability and that the nuclear Cas9-guide RNA complex levels limit the targeting efficiency. Fluorescence recovery after photobleaching measurements revealed that single mismatches in the guide RNA seed sequence …
Monkey-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey
Monkey-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey
Jarrod Bailey, PhD
Assertions that the use of monkeys to investigate human diseases is valid scientifically are frequently based on a reported 90–93% genetic similarity between the species. Critical analyses of the relevance of monkey studies to human biology, however, indicate that this genetic similarity does not result in sufficient physiological similarity for monkeys to constitute good models for research, and that monkey data do not translate well to progress in clinical practice for humans. Salient examples include the failure of new drugs in clinical trials, the highly different infectivity and pathology of SIV/HIV, and poor extrapolation of research on Alzheimer’s disease, Parkinson’s …
Lessons From Chimpanzee-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey
Lessons From Chimpanzee-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey
Jarrod Bailey, PhD
Assertions that the use of chimpanzees to investigate human diseases is valid scientifically are frequently based on a reported 98–99% genetic similarity between the species. Critical analyses of the relevance of chimpanzee studies to human biology, however, indicate that this genetic similarity does not result in sufficient physiological similarity for the chimpanzee to constitute a good model for research, and furthermore, that chimpanzee data do not translate well to progress in clinical practice for humans. Leading examples include the minimal citations of chimpanzee research that is relevant to human medicine, the highly different pathology of HIV/AIDS and hepatitis C virus …
Regulatory Paradigms For Modern Breeding, Drew L. Kershen, Wayne A. Parrott
Regulatory Paradigms For Modern Breeding, Drew L. Kershen, Wayne A. Parrott
Drew L. Kershen
Modern breeding, based upon molecular biology using genetic information, has made rapid advances. Breeders using rDNA techniques properly can think of this technique as traditional biotechnology. Within the past ten years, breeders have begun to use newer techniques [site-directed nuclease techniques (SDNs), RNAi, and synthetic biology] to create and to develop plants and animals with desired genetic traits. In this chapter printed in the NABC 26 Report (May 2015), the authors address the question: What is the appropriate regulatory paradigm for modern breeding?
Probiotics: Finding The Right Regulatory Balance, Diane E. Hoffmann, Claire M. Fraser-Liggett, Frank B. Palumbo, Jacques Ravel, Karen H. Rothenberg, Virginia Rowthorn
Probiotics: Finding The Right Regulatory Balance, Diane E. Hoffmann, Claire M. Fraser-Liggett, Frank B. Palumbo, Jacques Ravel, Karen H. Rothenberg, Virginia Rowthorn
Karen H. Rothenberg
Some products marketed as drugs should be excused from Phase I trials, but safety and efficacy claims for dietary supplements should be more tightly regulated.
Separate Sex-Influenced And Genetic Components In Spontaneously Hypertensive Rat Hypertension, Monte E. Turner, Mark L. Johnson, Daniel Ely
Separate Sex-Influenced And Genetic Components In Spontaneously Hypertensive Rat Hypertension, Monte E. Turner, Mark L. Johnson, Daniel Ely
Monte E. Turner
Previous results from our laboratory indicated two major genetic components of spontaneously hypertensive rat (SHR) hypertension, an autosomal component and a Y chromosome component. Two new substrains, SHR/a and SHR/y, were developed using a series of backcrosses to isolate each of these components. The SHR/a substrain has the autosomal loci and X chromosome from the SHR strain and the Y chromosome from the Wistar-Kyoto (WKY) rat strain. The SHR/y substrain has only the Y chromosome from the SHR and autosomal loci and X chromosome from the WKY strain. Throughout these breeding programs parents were chosen at random without selection for …
Genetic-Divergence Between The Wistar-Kyoto Rat And The Spontaneously Hypertensive Rat, Mark L. Johnson, Daniel Ely, Monte E. Turner
Genetic-Divergence Between The Wistar-Kyoto Rat And The Spontaneously Hypertensive Rat, Mark L. Johnson, Daniel Ely, Monte E. Turner
Monte E. Turner
A method of restriction fragment length polymorphism (RFLP) analysis was used to estimate the amount of genetic divergence between the spontaneously hypertensive rat (SHR) strain and the Wistar-Kyoto (WKY) strain. DNA from each strain was digested with eight restriction endonucleases and hybridized with six single copy gene sequences. The number of hybridization bands in each digestion was used to estimate the total number of bases analyzed and RFLPs were scored as single mutations. Divergence was then estimated by dividing the number of mutations by the number of bases analyzed. In a total of 808 bases analyzed in WKY rats, a …
Testosterone Effects On Renal Norepinephrine Content And Release In Rats With Different Y Chromosomes, Thomas J. Jones, Gail Dunphy, Amy Milsted, Daniel Ely
Testosterone Effects On Renal Norepinephrine Content And Release In Rats With Different Y Chromosomes, Thomas J. Jones, Gail Dunphy, Amy Milsted, Daniel Ely
Amy Milsted
The Y chromosome in spontaneously hypertensive rats (SHR) and stroke-prone rats has been shown to contain a locus that contributes to the hypertensive effect; both the sympathetic nervous system and testosterone may be involved. The objective of this study was to look at the effects of testosterone on renal norepinephrine (NE) release and content in the isolated perfused kidney in different Y chromosome backgrounds. The study involved male SHR, Wistar-Kyoto rats (WKY), and 2 consomic strains with different Y chromosomes (n=5 to 8 per group). Adult animals were castrated, and implants containing testosterone propionate were placed at the base of …
Encyclopedia Of Animal Behavior, A. Payne, P. Starks, Aviva Liebert
Encyclopedia Of Animal Behavior, A. Payne, P. Starks, Aviva Liebert
Aviva E Liebert
The Encyclopedia of Animal Behavior has engaged-with great success-the efforts of many of the best behavioral biologists of the 21st century. Section editors drawn from the most accomplished behavioral scientists of their generation have enrolled an international cast of highly respected thinkers and writers-all of whom have taken great care and joy in illuminating every imaginable corner of animal behavior. This comprehensive work covers not only the usual topics such as communication, learning, sexual selection, navigation, and the history of the field, but also emerging topics in cognition, animal welfare, conservation, and applications of animal behavior. The large section on …
Taming Of The Skew: Transactional Models Fail To Predict Reproductive Partitioning In The Paper Wasp Polistes Dominulus, Aviva Liebert, Philip Starks
Taming Of The Skew: Transactional Models Fail To Predict Reproductive Partitioning In The Paper Wasp Polistes Dominulus, Aviva Liebert, Philip Starks
Aviva E Liebert
Female Polistes paper wasps can initiate colonies either solitarily or in cooperative groups. Reproduction is often distributed unequally in groups, even to the point of complete monopolization of breeding by the dominant group member. Transactional models of reproductive skew predict the degree of reproductive partitioning, assuming that the dominant controls group membership and will yield a proportion of reproduction to a subordinate as an incentive to stay peacefully in the group. Using a combination of demographic, genetic and morphological data from a population of P. dominulus, we test predictions of 'classical' two-person skew models as well as more complex …
Sexual Interactions And Nestmate Recognition In Invasive Populations Of Polistes Dominulus Wasps, Aviva Liebert, N Wilson-Rich, C Johnson, Philip Starks
Sexual Interactions And Nestmate Recognition In Invasive Populations Of Polistes Dominulus Wasps, Aviva Liebert, N Wilson-Rich, C Johnson, Philip Starks
Aviva E Liebert
Many social insect species have mating systems or recognition abilities that minimize the chance of inbreeding. In haplodiploid systems, inbreeding is especially costly due to the production of sterile offspring such as diploid males. Diploid males (and their triploid offspring) have been identified in invasive populations of the paper wasp, Polistes dominulus, but to date have not been reported in its native populations. Due to the degree of genetic diversity in the invasive populations, it is unlikely that the production of these genetic ‘misfits’ is the result of a genetic bottleneck alone, but rather that errors in nestmate recognition may …
Nest Hydrocarbons As Cues For Philopatry In A Paper Wasp, Annagiri Sumana, Aviva Liebert, Anne Berry, Ghislaine Switz, Colin Orians, Philip Starks
Nest Hydrocarbons As Cues For Philopatry In A Paper Wasp, Annagiri Sumana, Aviva Liebert, Anne Berry, Ghislaine Switz, Colin Orians, Philip Starks
Aviva E Liebert
Philopatric behavior has been demonstrated in a wide taxonomic spread of animals. In temperate environments, overwintered Polistes wasp foundresses often return to their natal nest prior to initiating colony construction. Previous research has shown that these spring foundresses can identify the natal nest in the absence of landmark and gross morphological cues. Hydrocarbons are essential recognition cues for Polistes nest and nestmate discrimination, but cuticular hydrocarbon profiles can become homogenized when foundresses overwinter in mixed colony groups. We examined the hydrocarbon profiles of Polistes dominulus foundresses and nests before and after an overwintering period, and found that the hydrocarbon profiles …
Extreme Polygyny: Multi-Seasonal “Hypergynous” Nesting In The Introduced Paper Wasp Polistes Dominulus, Aviva Liebert, Julia Hui, Peter Nonacs, Philip Starks
Extreme Polygyny: Multi-Seasonal “Hypergynous” Nesting In The Introduced Paper Wasp Polistes Dominulus, Aviva Liebert, Julia Hui, Peter Nonacs, Philip Starks
Aviva E Liebert
In temperate climates, female paper wasps typically initiate new colonies in the spring. Several nest-founding tactics have been documented in Polistes species, including solitary nest initiation, joining a cooperative association, usurping an existing nest, or adopting an abandoned nest. Occasionally, exceptionally large groups of females have also been found reusing nests from the previous season. Here we report this phenomenon in introduced populations of the Eurasian species Polistes dominulus. We describe in detail the demographic and genetic characteristics of one such spring colony from Los Angeles, California, USA, which was collected with 84 associated adults and all stages of developing …
Solitary Nesting And Reproductive Success In The Paper Wasp Polistes Aurifer, Aviva Liebert, Peter Nonacs, Robert Wayne
Solitary Nesting And Reproductive Success In The Paper Wasp Polistes Aurifer, Aviva Liebert, Peter Nonacs, Robert Wayne
Aviva E Liebert
Female Polistes paper wasps are capable of independent nesting, yet many populations demonstrate a mixture of solitary and cooperative nest foundation. Previous studies of Polistes have found survival and/or productivity advantages of cooperative nest foundation compared to solitary nesting, and reproductive skew models have been designed to predict the dynamics of such flexible cooperation. In this paper, we examine the success of different nesting strategies in a previously unstudied population of Polistes aurifer in southern California. The colony cycle of this population is less synchronous than that of other temperate species, and the frequency of solitary nesting averages 86.2%. Our …
Diploid Males And Their Triploid Offspring In The Paper Wasp Polistes Dominulus, Aviva Liebert, Annagiri Sumana, Philip Starks
Diploid Males And Their Triploid Offspring In The Paper Wasp Polistes Dominulus, Aviva Liebert, Annagiri Sumana, Philip Starks
Aviva E Liebert
Although the hymenopteran sex-determining mechanism generally results in haploid males and diploid females, diploid males can be produced via homozygosity at the sex-determining locus. Diploid males have low fitness because they are effectively sterile or produce presumably sterile triploid offspring. Previously, triploid females were observed in three species of North American Polistes paper wasps, and this was interpreted as indirect evidence of diploid males. Here we report what is, to our knowledge, the first direct evidence: four of five early male-producing Polistes dominulus nests from three populations contained diploid males. Because haploid males were also found, however, the adaptive value …
Brca1 Dna-Binding Activity Is Stimulated By Bard1, Amanda Simons, Andrew Horwitz, Lea Starita, Karen Griffin, R Williams, J.N. Glover, Jeffrey Parvin
Brca1 Dna-Binding Activity Is Stimulated By Bard1, Amanda Simons, Andrew Horwitz, Lea Starita, Karen Griffin, R Williams, J.N. Glover, Jeffrey Parvin
Amanda Simons
The breast- and ovarian-specific tumor suppressor BRCA1 has been implicated in numerous cellular processes, including transcription, ubiquitination, and DNA repair. Its tumor suppression activity is tightly linked to that of BARD1, a protein that heterodimerizes with BRCA1. It has been previously shown that BRCA1 binds to DNA, an interesting functional observation in light of the genetic data linking BRCA1 to DNA repair pathways. In this work, we reexamine the DNA-binding properties of BRCA1, comparing them with the DNA-binding properties of the BRCA1/BARD1 heterodimer. Because nuclear BRCA1 exists as a heterodimer with BARD1, it is likely that in vitro studies of …
Direct Dna Binding Activity Of The Fanconi Anemia D2 Protein, Woo-Hyun Park, Steven Margossian, Andrew Horwitz, Amanda Simons, Alan D'Andrea, Jeffrey Parvin
Direct Dna Binding Activity Of The Fanconi Anemia D2 Protein, Woo-Hyun Park, Steven Margossian, Andrew Horwitz, Amanda Simons, Alan D'Andrea, Jeffrey Parvin
Amanda Simons
It is known that the Fanconi anemia D2 protein is vital for protecting the genome from DNA damage, but what activities this protein has are unknown. In these experiments we purified full-length Fanconi anemia protein D2 (FANCD2), and we found that FANCD2 bound to DNA with specificity for certain structures: double strand DNA ends and Holliday junctions. Proteins containing patient-derived mutations or artificial variants of the FANCD2 protein were similarly expressed and purified, and each variant bound to the Holliday junction DNA with similar affinity as did the wild-type protein. There was no single discrete domain of FANCD2 protein that …
Ground Nesting In The Paper Wasp Polistes Aurifer (Hymenoptera: Vespidae), Aviva Liebert
Ground Nesting In The Paper Wasp Polistes Aurifer (Hymenoptera: Vespidae), Aviva Liebert
Aviva E Liebert
Polistes paper wasp species vary in their nest site selection, with some nesting in relatively exposed areas and others in protected cavities. Locating the nest sites of cavity dwelling species in natural habitat can prove difficult, and most behavioral studies on these species are therefore conducted using human-built structures. Since Hungerford and Williams (1912) and Rau (1929) noted the location of several P. fuscatus (Fabricius) nests in rodent burrows, there have been no published accounts of ground nesting Polistes species. I report the occurrence of a large, dense cluster of P. aurifer (Saussure) nests located within cracks in the dried …
Phylogeny And Historical Biogeography Of The Spider Genus Lutica (Araneae, Zodariidae), Richard Beckwitt, Richard Beckwitt
Phylogeny And Historical Biogeography Of The Spider Genus Lutica (Araneae, Zodariidae), Richard Beckwitt, Richard Beckwitt
Richard D Beckwitt
Spiders of the genus Lutica from 19 populations in southern California and Baja California, including all the California Channel Islands except Anacapa, were compared electrophoretically on the basis of variability at 15 gene loci. Fixed allelic differences clearly define two species: new species A [Santa Barbara and Ventura Counties, northern Channel Islands (San Miguel, Santa Rosa, Santa Cruz), southern Channel Islands (San Nicolas, Santa Barbara, Santa Catalina)] and new species C [Guerrero Negro, central Baja California], while morphological features define two others: new species B [Los Angeles, Orange and San Diego Counties, northern Baja California] and clementea [San Clemente Island]. …
Fanconi Anemia Protein Fancd2 Inhibits Trf1 Polyadp-Ribosylation Through Tankyrase1-Dependent Manner, Alex Lyakhovich, Maria Ramirez, Andres Castella, Amanda Simons, Jeffrey Parvin, Jordi Suralles
Fanconi Anemia Protein Fancd2 Inhibits Trf1 Polyadp-Ribosylation Through Tankyrase1-Dependent Manner, Alex Lyakhovich, Maria Ramirez, Andres Castella, Amanda Simons, Jeffrey Parvin, Jordi Suralles
Amanda Simons
Background: Fanconi anemia (FA) is a rare autosomal recessive syndrome characterized by developmental abnormalities, progressive bone marrow failure, and predisposition to cancer. The key FA protein FANCD2 crosstalks with members of DNA damage and repair pathways that also play a role at telomeres. Therefore, we investigated whether FANCD2 has a similar involvement at telomeres. Results: We reveal that FANCD2 may perform a novel function separate to the FANCD2/BRCA pathway. This function includes FANCD2 interaction with one of the telomere components, the PARP family member tankyrase-1. Moreover, FANCD2 inhibits tankyrase-1 activity in vitro. In turn, FANCD2 deficiency increases the polyADPribosylation of …
Transactional Skew And Assured Fitness Return Models Fail To Predict Patterns Of Cooperation In Wasps, Peter Nonacs, Aviva Liebert, Philip Starks
Transactional Skew And Assured Fitness Return Models Fail To Predict Patterns Of Cooperation In Wasps, Peter Nonacs, Aviva Liebert, Philip Starks
Aviva E Liebert
Cooperative breeders often exhibit reproductive skew, where dominant individuals reproduce more than subordinates. Two approaches derived from Hamilton’s inclusive fitness model predict when subordinate behavior is favored over living solitarily. The assured fitness return (AFR) model predicts that subordinates help when they are highly likely to gain immediate indirect fitness. Transactional skew models predict dominants and subordinates “agree” on a level of reproductive skew that induces subordinates to join groups. We show the AFR model to be a special case of transactional skew models that assumes no direct reproduction by subordinates. We use data from 11 populations of four wasp …
Identification Of Genetic Risk Associated With Prostate Cancer Using Ancestry Informative Markers, Bradford Wilson
Identification Of Genetic Risk Associated With Prostate Cancer Using Ancestry Informative Markers, Bradford Wilson
Bradford Wilson
Regulatory Elements Of Xenopus Col2a1 Drive Cartilaginous Gene Expression In Transgenic Frogs, Ryan R. Kerney, Brian K. Hall, James Hanken
Regulatory Elements Of Xenopus Col2a1 Drive Cartilaginous Gene Expression In Transgenic Frogs, Ryan R. Kerney, Brian K. Hall, James Hanken
Ryan Kerney
This study characterizes regulatory elements of collagen 2α1 (col2a1) in Xenopus that enable transgene expression in cartilage-forming chondrocytes. The reporters described in this study drive strong cartilage-specific gene expression, which will be a valuable tool for further investigations of Xenopus skeletal development. While endogenous col2a1 mRNA is expressed in many embryonic tissues, its expression becomes restricted to tadpole and adult chondrocytes. This chondrocyte-specific expression is recapitulated by col2a1 reporter constructs, which were tested through I-SceI meganuclease-mediated transgenesis. These constructs contain a portion of the Xenopus tropicalis col2a1 intron, which aligns to a cartilage-specific intronic enhancer that has been well characterized …
Evidence For An Epigenetic Mechanism By Which Hsp90 Acts As A Capacitor For Morphological Evolution, Vincent E. Sollars, Xiangyi Lu, Li Xiao, Xiaoyan Wang, Mark D. Garfinkel, Douglas M. Ruden
Evidence For An Epigenetic Mechanism By Which Hsp90 Acts As A Capacitor For Morphological Evolution, Vincent E. Sollars, Xiangyi Lu, Li Xiao, Xiaoyan Wang, Mark D. Garfinkel, Douglas M. Ruden
Vincent E Sollars
Morphological alterations have been shown to occur in Drosophila melanogaster when function of Hsp90 (heat shock 0-kDa protein 1α, encoded by Hsp83) is compromised during development1. Genetic selection maintains the altered phenotypes in subsequent generations1. Recent experiments have shown, however, that phenotypic variation still occurs in nearly isogenic recombinant inbred strains of Arabidopsis thaliana2. Using a sensitized isogenic D. melanogaster strain, iso-KrIf-1, we confirm this finding and present evidence supporting an epigenetic mechanism for Hsp90’s capacitor function, whereby reduced activity of Hsp90 induces a heritably altered chromatin state. The altered chromatin state is evidenced by ectopic expression of the morphogen …