Life Sciences Commons^™

Eavesdropping On Gulf Of Maine Cetaceans In The Vicinity Of Mount Desert Rock, Christopher James Tremblay

Electronic Theses and Dissertations

Passive acoustic monitoring, the recording and analysis of biological sound, is a standard method of research into the distribution and behavior of cetaceans worldwide. Acoustic monitoring is reliant upon a thorough reference catalog of species vocalizations and an understanding of the temporal and geographic parameters in which vocalizations occur. This study combined a standard cetacean passive acoustic monitoring survey with a concurrent visual survey at a known baleen whale summer feeding ground to determine the annual species and vocal composition, compare species detection rates using each method, and identify and attribute novel vocalizations to species. The survey took place at …

Assessing The Upper Critical Limit Of The Thermoneutral Zone In Laboratory Mice, Teumbo Ngunte

Electronic Theses and Dissertations

Endothermic organisms such as mammals and birds rely on high energy budgets to regulate body temperature. Many studies have previously investigated the thermo-regulation of mammals under the lower critical temperature of the thermoneutral zone, yet our knowledge in determining the upper critical limits is still scarce. As an endotherm, lab mice (Mus musculus) are perfect models to determine the cost to maintain constant body temperature as ambient temperature increases. The upper critical temperature of the thermoneutral zone of this species has been estimated to be above 32°C and below 34°C. By utilizing different genetic backgrounds of lab mice in this …

Providing Experimental Evidence For Mouse Telomerase Reverse Transcriptase As A Novel And Unique Adult Neural Stem Cell Marker, Caroline Dean Curtis

Electronic Theses and Dissertations

With the prevalence of neurodegenerative pathologies in our society today it is imperative that we begin to look at novel approaches to the underlying problem of dying neurons that are not replaced. Adult neural stem cells exist naturally and could potentially be manipulated into targeted repair of damaged brains, given substantial research. The first step in this process is to find a way to specifically mark the earliest subset of these cells, the quiescent adult neural stem cells. Here we provide evidence for the existence of a novel and unique qANSC marker in mouse telomerase reverse transcriptase (mTERT). mTERT has …

Characterization And Functional Rescue Of Congenital Muscular Dystrophy With Megaconial Myopathy In A Mouse Model Of The Disease, Ambreen A. Sayed

Electronic Theses and Dissertations

Congenital muscular dystrophy with megaconial myopathy (MDCMC) is an autosomal recessive disorder characterized by progressive muscle weakness and wasting. Megamitochondria in skeletal muscle biopsies and cognitive impairments in MDCMC patients are observations exclusive to this type of muscular dystrophy. The disease is caused by loss of function mutations in the choline kinase beta (CHKB) gene which results in dysfunction of the Kennedy pathway for the synthesis of phosphatidylcholine (PC). A rostro-caudal muscular dystrophy (rmd) mouse with a deletion in the Chkb gene resulting in MDCMC-like symptoms has been reported by our lab. In order to test if the rmd mice …

Effects Of Increasing Temperature And Acidification On The Growth And Competitive Success Of Alexandrium Catenella From The Gulf Of Maine, Drajad Seto

Electronic Theses and Dissertations

The increases in ocean temperature and pCO2 due to climate change are projected to affect the growth and future prevalence of Harmful Algal Blooms (HABs) in nearshore waters, but systematic studies on the effects these climate drivers have on harmful algal species are lacking. In particular, little is known about how future climate scenarios will affect the growth of the toxic dinoflagellate Alexandrium catenella, which produces the toxins responsible for paralytic shellfish poisoning (PSP) that threaten the health and economy of coastal communities in the Gulf of Maine. I examined growth responses of A. catenella and two other naturally co-occurring …

Developing Animal Feed Preservatives From Paper Mill Byproducts, Diana Carolina Reyes Gomez

Electronic Theses and Dissertations

Our objectives were to evaluate the antifungal properties of technical lignins against 3 molds and 1 yeast causing hay spoilage, and for their ability to preserve alfalfa hay nutritive value. In experiment 1, 8 technical lignins and propionic acid (PRP; positive control) were tested at a dose of 40 mg/mL. The experiment had a randomized complete block design (RCBD, 4 runs) and a factorial arrangement of 3 molds × 10 additives (ADV). The effects of ADV on the yeast were also evaluated with a RCBD. Across fungi, sodium lignosulfonate (NaL) and PRP were the only treatments with a 100 ± …

The Infection Dynamics Of Sea Lice On Atlantic Salmon (Salmo Salar) In Cobscook Bay, Maine, Usa, Catherine Anne Frederick

Electronic Theses and Dissertations

Sea lice (Lepeophtheirus and Caligus spp) are parasitic copepods that infect the external surfaces of fish hosts. Salmon lice (L. salmonis) outbreaks are commonly reported by operations in Canada, Norway, Scotland, Ireland, and the United States and are a primary concern in aquaculture because of their fish health and economic impacts. When farmed fish mortalities and treatments are accounted for, annual losses from sea louse infestations exceed $300,000,000 (Costello 2009). Farms experiencing sea lice infections risk on-site re-infection and transmission to wild populations and other farms that are hydrographically connected. In Maine, Atlantic salmon farms are located in the northeast, …

Modeling Human Cancer Therapy Response In Patient Derived Xenografts, Joan Malcolm

Electronic Theses and Dissertations

Patient‐derived xenografts (PDXs) generated by implanting human tumor tissue into a transplant compliant mouse host have been of increasingly importance to preclinical development and have been demonstrated to have advantages compared to cancer cell lines and cell‐line xenografts (CLX) for modeling therapeutic responses in cancer. Nevertheless, many open questions remain regarding the relationship between study design factors and classification of treatment response and the molecular fidelity of tumors passaged in PDXs relative to the original patient tumor(s). The research described in this dissertation addresses both of these significant issues related to the use of PDXs as a tool for modeling …

Multi-Tactic Ecological Weed Management In A Changing Climate, Sonja K. Birthisel

Electronic Theses and Dissertations

Climate change is expected to impact weed communities in Maine, and the efficacy of tools and tactics farmers use to manage them. Through seedbank sampling and surveys of Maine organic farms, we identified currently rare weeds that are known to be especially abundant or problematic in warmer areas of the USA and might therefore represent an emerging agronomic risk. Many ecological weed management strategies that focus on depleting the weed seedbank are expected to remain effective in a changing climate, and become increasingly important as efficacy of cultivation and some herbicide applications diminish or become more variable. Through field experiments, …

Associations Between Avian Spruce-Fir Species, Harvest Treatments, Vegetation, And Edges, Brian W. Rolek

Electronic Theses and Dissertations

Habitat loss is the primary cause of species loss and declines of global biodiversity. Several birds associated with the spruce-fir forest type (hereafter spruce-fir birds) have declining populations across the continent in the Atlantic Northern Forest, and the extent of coniferous forest has declined in some areas. This region is extensively and intensively managed for timber products.

To investigate the influence from harvest treatments on the spruce-fir bird assemblage during the breeding and post-breeding period in lowland conifer and mixed-wood forests, we used avian point count detection data to test for associations between avian assemblages and seven common harvest treatments. …

Ecological Consequences Of Personality In A Guild Of Terrestrial Small Mammals: From Trappability To Seed Dispersal, Allison M. Brehm

Electronic Theses and Dissertations

Individual animals exhibit consistent behavioral tendencies over time and across contexts that have been termed personalities. Personality encapsulates an individual’s unique way of behaving and responding to life’s challenges, and since individuals vary in both personality type and their ability to exhibit behavioural plasticity, there are important links between an individual’s personality and its response to a changing environment; resulting in the study of animal personalities becoming increasingly popular in recent years. Previous research suggests that personality traits measured through standardized behavioural tests predict trappability (i.e. ‘trap happiness’ versus ‘trap shyness’). This relationship has been explored only within single …

Climatic Range Filling Of North American Trees, Benjamin Seliger

Electronic Theses and Dissertations

Understanding the degree to which species distributions are controlled by climate is crucial for forecasting biodiversity responses to climate change. Climatic equilibrium, when species are found in all places which are climatically suitable, is a fundamental assumption of species distribution models, but there is evidence in support of climate disequilibria in species ranges. Long-lived, sessile organisms such as trees may be especially vulnerable to being outpaced by climate change, and thus prone to disequilibrium. In this dissertation, I tested the degree to which North American trees are in equilibrium with their potential climatic ranges using the ‘range filling’ metric, which …

Black Soldier Fly Larvae As Value-Added Feed For Aquaculture In Maine, Joshua Villazana

Electronic Theses and Dissertations

Black soldier flies (BSF), Hermetia illucens (Linnaeus) (Diptera: Stratiomyidae) consume decaying organic waste as larvae (BSFL) and can be used for recycling a variety of biogenic wastes. BSFL can also be processed into value-added animal feeds, including those used in aquaculture. An overarching goal of this project was to obtain additional insights into BSF biology to improve their rearing and handling in future mass-production facilities serving Maine aquaculture.

We tested BSFL growth in the laboratory on seven seafood wastes from Maine fish processing facilities. Substrates potentially suitable for BSFL rearing included finfish trimmings, wet sea cucumber, dry quahog, and sea …

The Effects Of Seasonal Variations In Chemistry And Hydrology On The Microbial Community And Its Sulfide Oxidation Potential In A Naturally Acidic Maine Stream, Raymond C. Kahler Iii

Electronic Theses and Dissertations

Sulfide minerals oxidize through interaction with water and oxygen, releasing hydrogen ions. The process often occurs naturally near metal sulfide deposits, and can be accelerated through mining. Microorganisms accelerate the rate of sulfide oxidation. Acidified streams typically contain high metal concentrations (e.g. aluminum) and microbes in these systems may develop resistances to metal toxicity. Stream flow can affect sulfide oxidation and microbial community structure. Baseflow can influence stream chemistry from interactions with the surrounding bedrock, while stormflow affects stream chemistry and the local microbial community through dilution and addition of microbes transported by runoff. Microbial community composition is affected by …

Lead Poisoning In Maine's Common Loons: Examining Biological And Social Dimensions, Brooke S. Macdonald

Electronic Theses and Dissertations

Lead poisoning from ingested fishing tackle is a well-documented conservation concern for adult common loons in the Northeastern United States. To mitigate this issue, the state of Maine began implementing restrictions on lead tackle use in 2002, with new legislation added in 2016 and 2017. In addition to legislative action there have been various non-regulatory strategies employed in Maine to help raise awareness, such as the Fish Lead Free campaign. Human behavior is the root cause of lead fishing tackle in aquatic environments, and also can determine the success of legislative and educational efforts. Measuring underlying factors that influence behaviors, …

Host Mediated Mechanisms Of Fungal Cell Spread In A Transparent Zebrafish Infection Model, Allison Scherer

Electronic Theses and Dissertations

Innate immunity has developed elegant processes for the detection and clearance of invasive fungal pathogens. Disseminated candidiasis is of significant concern for those with suppressed immune systems or indwelling medical equipment, and mortality in these groups approaches 70%. Poor patient outcomes have spurred the need to understand how this non-motile pathogen spreads in the host. Technical limitations have previously hindered our ability to visualize the role of innate immunity and host tissue barriers in the spread of C. albicans in vivo. Using the zebrafish model to overcome these limitations, we have examined three potential host-mediated mechanisms of dissemination: movement …

Thermal And Microbial Effects On Brown Macroalgae: Heat Acclimation And The Biodiversity Of The Microbiome, Charlotte Tc Quigley

Electronic Theses and Dissertations

This dissertation examines effects of stress on brown algal biology from a macroscopic scale by examining the whole aquaculture crops, and at a microscopic level by examining the macroalgal microbiome, across the vertical stress gradient of the intertidal zone and across the latitudes of their biogeographic ranges. Thermal stress negatively affected seedstock gametophytes of the kelp Alaria esculenta isolated from northern and southern locations in Maine. However, previous thermal stress had a positive effect on growth of the next-generation sporophytes. Alaria esculenta has potential as a kelp crop in Maine’s sea vegetable aquaculture sector and implementing this protocol may allow …

The Effect Of Wild Blueberry Bioactives On Endothelial Cell Migration And Angiogenesis: An In Vitro Mechanistic, Genomic And Proteomic Approach, Panagiotis Tsakiroglou

Electronic Theses and Dissertations

The goal of this study is to investigate the effects of wild blueberry fractions (Anthocyanins and Phenolic acids) on vascular function and physiology. More specifically the potential effects of the above fractions and their combination in physiological concentrations on endothelial cell migration, angiogenesis, gene expression and proteins synthesis of markers related to the above processes. The objectives are to study whether anthocyanins, phenolic acids and their combinations (ACNs:PAs) affect: a) cell proliferation, b) speed of endothelial cell migration, c) angiogenesis, d) gene expression of genes critical for cell migration and angiogenesis such as RAC1, RHOA, AKT1, eNOS and VEGF and …

Periodic Evaluation Of Northeastern Spruce And Balsam Fir Lumber Properties, Ben L. Farber

Electronic Theses and Dissertations

PERIODIC EVALUATION OF NORTHEASTERN SPRUCE AND BALSAM FIR LUMBER PROPERTIES

By Benjamin Farber

Advisors: Dr. Douglas Gardner

An Abstract of the Thesis Presented

In Partial Fulfilment of the Requirements for the

Degree of Master of Science

(In Forest Resources)

August 2018

In the past two decades, proportions of juvenile wood have increased in lumber cut from intensively managed Southern yellow pine (Pinus spp.) plantation-based forests. Knowing that a decrease in rotation age can increase proportions of juvenile wood, which in turn negatively affects mechanical properties in lumber, the SYP grouping was evaluated to determine if the published design values …

Characterization Of Phosphorylated G Protein Function And Membrane Culstering By Super Resolution Imaging, Sarah A. Alamer

Electronic Theses and Dissertations

Heterotrimeric G proteins play crucial roles in various signal transduction pathways, where they act as molecular switches in transducing a signal from G protein coupled receptors (GPCRs) at the plasma membrane to downstream effectors. Although their mechanism of action is mostly concentrated at the plasma membrane, their dynamic membrane organization and how it is regulated are not understood. Due to the diffraction limited resolution of fluorescence microscopy, studying the precise organization of membrane proteins can be challenging. In this study, we took advantage of super-resolution fluorescence photoactivation localization microscopy (FPALM) to overcome this challenge. Dictyostelium discoideum was used as a …

Drivers Of Tree Growth And Mortality In An Uneven-Aged, Mixed-Species Conifer Forest Of Northeastern United States, Erin Fien

Electronic Theses and Dissertations

Individual tree growth and mortality drive forest stand dynamics and are important, universal metrics of tree success. Studying the factors that affect growth and mortality is particularly challenging in mixed-species, uneven-aged systems due to their defining heterogeneity and strong temporal and spatial variability. However a better understanding of the factors driving growth and mortality in mixed-species, uneven-aged forest is crucial to managing and maintaining these valuable systems for the future.

The goal of this study was to determine the relative importance of individual tree attributes (e.g., species, size, neighborhood crowding, crown position) and environmental characteristics (e.g., soil moisture) in driving …

Eco-Evolutionary Implications Of Environmental Change Across Heterogeneous Landscapes, Jared J. Homola

Electronic Theses and Dissertations

Species use a variety of mechanisms to adapt to environmental change. These range from spatially tracking optimal environments, to phenotypically plastic responses and evolutionary adaptation. Due to increases in anthropogenic influence on environments, characteristics of change such as their duration and magnitude are undergoing fundamental shifts away from the natural disturbance regimes that shaped species’ evolution. This dissertation uses empirical data and simulation models to examine the ecological and evolutionary consequences of environmental change across real, heterogeneous landscapes for multiple species, with an emphasis on anthropogenic changes. I used landscape genetics to evaluate the effects of urbanization on two native …

Molecular Mechanisms Underlying Toxicant Effects On Mast Cell Signaling And Mitochondria, Juyoung Katherine Shim

Electronic Theses and Dissertations

Mast cells contribute to numerous physiological processes and diseases including immunological and neurological roles. Mast cells degranulate, releasing potent mediators, following signaling transduction initiated by receptor crosslinking. Previously, we showed that the environmental toxicant arsenic and the antibacterial agent triclosan inhibit mast cell degranulation; thus, we have investigated the mechanisms underlying their inhibitory action. We have discovered that arsenic targets early steps in the mast cell signaling pathway: it inhibits phosphorylation of early tyrosine kinase Syk and of Syk’s direct substrate PI3K. Arsenic’s tyrosine phosphorylation inhibition causes inhibition of calcium influx into the cytosol, a key event necessary for degranulation. …

Nitrogen Cycling During A Period Of Environmental Change, Kaizad Patel

Electronic Theses and Dissertations

Natural and anthropogenic disturbances have altered the N cycle on the regional to global scale. Although numerous studies have examined the effects of chronic atmospheric N deposition on ecosystem processes, less is known about intra-annual variability of these processes, or how these responses might be altered under conditions of changing climate. The work described in this dissertation focuses on the effects of a changing chemical and physical climate, particularly terrestrial N processes (a) during Maine’s changing winters, and (b) in response to chronic elevated N additions.

Subnivean winter soil processes were examined at the Dwight B. DeMerritt Forest (DBDF) and …

Broth: Enhancing Market Opportunities And Improving Sustainability Of Maine Farmed Seaweed, Zachary M. Bonelli

Electronic Theses and Dissertations

Seaweed is becoming popular across the world as consumers learn about the variety of seaweed-based products and their health benefits. Sugar kelp is one of Maine’s seaweed varieties that is locally grown each year. Sugar kelp and similar species contain many useful nutrients including iodine, calcium, magnesium, iron, and vitamins A, B, C, and E. Even though the health benefits of seaweed have been proven, locally-sourced seaweed has not yet become any more popular in Maine. Part one of this study identified suitable processing steps for a sugar kelp-based broth. Part two assessed how consumers’ demographics and food neophobia, as …

Effect Of Arsenic Exposure On Early Eye Development In Zebrafish (Danio Rerio), Remy S. Babich

Electronic Theses and Dissertations

Arsenic is a metalloid that contaminates drinking water supplies worldwide. Due to concerns for human health, the World Health Organization (WHO) and the U.S. Environmental Protection Agency (EPA) have established a safe level in drinking water of ≤ 10 ppb. Arsenic has been shown to have carcinogenic effects in humans at high and low doses. Chronic exposure may result in dermal conditions such as hyperkeratosis and hyperpigmentation. Recently, arsenic exposure has also been linked to lower IQ values in children. The effect of arsenic on neurogenesis, specifically eye development, has not been widely explored. This study aimed to examine the …

Forest Disturbance Detection And Aboveground Biomass Modeling Using Moderate-Resolution, Time-Series Satellite Imagery, John B. Kilbride

Electronic Theses and Dissertations

Human-induced and natural disturbances are an important feature of forest ecosystems. Disturbances influence forest structure and composition and can impact crucial ecosystem services. However, deriving spatially explicit estimates of past forest disturbance across a large region can prove challenging. Researchers have recognized that remote sensing is an important tool for monitoring forest ecosystems and mapping land use and land cover change. One of the most important sources of remotely sensed imagery is the United States Geologic Survey’s Landsat program which has continuously acquired earth observations since 1972. This repository of imagery has the spatial, spectral, and temporal resolution necessary to …

Consumer Acceptance And Phytonutrient Assessment Of Cold Hardy, Locally Grown Plums, Amber L. Elwell

Electronic Theses and Dissertations

Prunus salicina, Japanese plums, and Prunus domestica, European plums, are naturally rich in fiber, minerals, vitamins and phytonutrients. Consuming plums can increase overall fruit intake and can be incorporated into part of a healthy diet. Through local plum production, harvesting can be completed without the need for cross-country shipping, which can increase overall acceptability and nutritional quality of the fruit. Furthermore, the increase in local production can help to boost Maine’s economy and creates a market for new plum product production.

The first objective of this study was to determine consumer acceptance of locally grown plum cultivars at a …

Development Of Kefir Products Using Aronia Or Elderberries And The Impacts Of Fermentation On The Health-Promoting Characteristics Of Aronia Polyphenols, Xue Du

Electronic Theses and Dissertations

Diabetes is a global health problem. The consumption of dietary polyphenols may help to decrease the risk of type 2 diabetes and slow the progression of diabetic complications. Aronia (Aronia melanocarpa) and elderberry (Sambucus nigra L. ssp. canadensis) fruits are rich in polyphenols and exhibit health-promoting properties, but they are underutilized. Aronia and elderberries are rarely consumed raw due to the astringent mouth feel. New food products are needed to increase their consumption. Kefir, a fermented dairy beverage, was chosen to be the matrix for incorporating berries due to: 1) the protein matrix can help …

Flower Visitation In Relation To Pollen And Nectar Nutrition: Implications For Pollinator Habitat And Conservation, Megan E. Leach

Electronic Theses and Dissertations

Pollination of both wild and crop plants is at a crossroads; honey bee populations are experiencing losses at a higher rate than ever before, and some native bee species are declining in abundance to the point of being listed as endangered species. A few examples of these threats include pesticide exposure, habitat loss, and climate change. In response to bee population declines, conservation efforts have been initiated to increase habitat quality for bees by planting pollinator reservoirs or gardens. Plants provide nutrition to bees in the form of pollen and nectar. Several studies have shown links between higher nutritional quality …