Life Sciences Commons^™

Novel Microbiological Medium Developed For The Isolation Of Bacteria Associated With Estuarine Anemones, Parker K. Lund, Catalina Cuellar-Gempeler

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Out of the nearly one trillion species of microbiota estimated to inhabit Earth only ten thousand have been cultured in the laboratory. Culturing continues to play a vital role in determining the physiology and ecologic function of individual bacteria in microbial communities and for microbes associated with host organisms one of the major challenges is developing microbiological media that mimics the bacteria’s natural environment enough to promote growth. Here, we target bacteria associated with the estuary anemones Diadumene lineata and Metridium senile by developing a novel medium that uses anemone tissue as the sole source of nutrients. We further measured …

Ethanol Leaf Extracts Of Anogeissus Leiocarpus In Antioxidants And Hepatotoxic Effects Of Escherichia Coli Infected Swiss Mice, Fred Coolborn Akharaiyi, Chioma Bertha Ehis-Eriakha, Peter Taiwo Olagbemide, Stephen Eromosele Akemu

BioMedicine

Introduction: Diseases caused by bacteria can be managed with medicinal plants with rightful dosage that will not affect body physiology and organs.

Aim: This research aimed to evaluate the antioxidants and the effects of Anogeisus leiocarpus on liver function.

Materials and Methods: Ethanol leaf extracts were processed for antioxidants and hepatotoxic effects using animal models. Group one (negative control) was given access to water and regular feed, group two (positive control) was dosed with 107 CFU/ml of Escherichia coli O157:H7, and groups 3-6 were dosed with 107 E. coli O157:H7 for 3 days and treated with extract concentrations of 12, …

Growth, Yield, And Photosynthetic Dry Matter Remobilization Response Of Barley To Plant Growth Promoting Rhizobacteria (Pgpr) And Nitrogen, Abazar Abbasi, Shahram Mehri, Hossein Solimanzadeh, Saeid Alipour

The Philippine Agricultural Scientist

A two-year factorial experiment based on a randomized complete block design with three replicates was carried out on barley cultivar LB-IRAN at the research farm of the Islamic Azad University, Ardabil, Iran, during the cropping years of 2019–2021, in order to survey the impact of plant growth-promoting rhizobacteria (PGPR) and nitrogen fertilizer on growth, yield, and remobilization of photosynthetic dry matter in barley. The first factor included five nitrogen levels: 0 (control), 25, 50, 75, 100 kg/ha net nitrogen; the second factor contained grain inoculations with four bacteria: no inoculation (control), Azotobacter chroococcum race 5, Azospirillum lipoferum race of, and …

The Last Of Us In Therapy: How Mind-Controlling Fungi And Gut Bacteria Affect Your Mental Health, Anastasia Lyon

Journal of Pharmacology & Nutritional Sciences

The "psilocybiome" represents the mutually beneficial relationship between ourselves, our bacteria, and psychedelic drugs. This short review briefly discusses the benefits and limitations surrounding the potential for psychedelic therapy to synergize with gut bacteria to help regulate and maintain proper balance in the immune system, diet, and stress levels. Psychedelic therapy is a novel treatment strategy that has the potential to improve patient mental health, and, by identifying the types of gut bacteria present in patients, it can aid in personalizing medicine by determining how well their "psilocybiome" may respond.

(R1980) Effect Of Climate Change On Brain Tumor, Pardeep Kumar, Sarita Jha, Rajiv Aggarwal, Govind Kumar Jha

Applications and Applied Mathematics: An International Journal (AAM)

In this paper, we introduce a new dynamical model addressing the variation in climate condition due the presence of microorganisms. We also introduce a new dynamical model of cancer growth which includes three interactive cell populations with drug free environment, namely tumor cells, healthy host cells, and immune effector cells. In this, we considered the super growth of tumor cells. For the choice of certain parameters, both of the systems exhibit chaotic behavior. The aim of this work is to design the controller to control the chaos and to provide sufficient conditions which achieve synchronization of two non-identical systems, which …

The Large And Small Of It: The Microbiome And Metagenomics, Austin Hopkins, Elaina Gollmar, Jessica Fernandez, Shawn Wolf, Austin Hilverding, Andrew M. Roecker

Pharmacy and Wellness Review

Metagenomics, the analysis of the microbial genome, permits scientists to understand the influences of external sources including diet, metabolism and antibiotics on the human microbiome. Research has revealed the possibility of a core symbiosis between humans and bacteria. The main role of the human microbiome is to aid in digestion, but identified ancillary roles include immunologic homeostasis and infection prevention. Quantifying the composition and variability of the microbiome will help lead to future treatments or preventive strategies against unhealthy change. A variety of methods may be used to define the microbiome, and 16S amplicon sequencing is primarily utilized today. Probiotics …

All Living Organisms Are Sentient, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr.

Animal Sentience

We argue that all living organisms, from the simplest unicellular prokaryotes to Homo sapiens, have valenced experiences—feelings as states of preference—and are capable of cognitive representations. Bacteria can learn, form stable memories, and communicate, hence solve problems. Rowan et al.'s statement that "Subjective feelings are just that — subjective — and are available only to the animal (or human) experiencing them" is true but irrelevant. When we see a fish flopping about in the bottom of a boat we immediately recognize suffering without having a glimpse of the nature of piscine distress. Some controlled anthropomorphism can go a …

A Identification And Isolation Of Several Bacteria From Oral Cavity Among Human In Soran City, Holem Hashm Balaky, Alaa Taha Younis Al-Hammadi

Al-Qadisiyah Journal of Pure Science

The aim of this study has been to estimate that the number of bacteria in the mouth exceeds the total number of people on the planet. In this context, scientists have discovered more than 700 different types of human oral bacteria. With such a large number of oral bacteria present, many diseases that may threaten health, especially oral health, can emerge. For this reason, this study was employed and conducted on 252 healthy people in the Soran area of the city of Erbil. Both sexes were involved and different ages were selected. Swabs taken from 226 participants gave positive growths …

Analysis Of Total Acidity Toward Bacterial And Endophytic Fungi Profile Dur-Ing Black Garlic Processing From Garlic (Allium Sativum L.) And Shallot (Allium Ascalonicum L.), Ayu Rahmania Lestari, Surjani Wonorahardjo, Suharti Suharti

Makara Journal of Science

Black garlic or shallot are products of processed garlic and shallots obtained through a heating process conducted over a certain period. Black garlic/shallots have a mild aroma with a sweet and sour taste. The heating process causes chemical compound transition in the garlic, including acidity. In addition to the chemical process, the garlic’s color and component changes are due to the role of microorganisms during black garlic processing. However, the presence and function of such microorganisms have not been identified. Therefore, this research explores the black garlic’s microorganisms, their role in black garlic processing, and their relation to the total …

Salmonella: Clever Bacteria, Najnin Rimi

Osmosis Magazine

A recent outbreak of salmonella caused many grocery stores to recall their onions and many unknowing consumers to become ill. A major produce supplier from California, Thompson International Inc., had announced a recall on August 1st for all onion types distributed by the company starting May 1st of 2020. This caused a recall from over hundreds of grocery stores, even our familiar Kroger and Walmart grocery stores.

Increasing Antibiotic Resistance In Shigella Bacteria In The United States, William J. Pharr

The Corinthian

Shigella bacteria cause half a million infections, 6,000 hospitalizations, and 70 deaths annually in the United States. These bacteria are of particular concern due to their high survivability, low infectious dose, and high adaptability. Cases of shigellosis from Shigella sonnei are becoming a more prevalent issue in the U.S. as the bacteria continues to develop higher resistance to today’s strongest antibiotics. Much of this resistance is connected to the exchange of genes between strains of Shigella due to insertion sequences (IS), intercontinental travel, and men who have sex with men (MSM). As a result of increased resistance, the use of …

The Impact Of Sample Processing And Media Chemistry On The Culturable Diversity Of Bacteria Isolated From A Cave, Katey E. Bender, Katelyn Glover, Alexander Archey, Hazel A. Barton

International Journal of Speleology

Although molecular approaches can identify members of microbial communities in the environment, genomic information does not necessarily correlate with environmental phenotype. Understanding functional roles can be done by cultivating representative species, yet the culturablility of bacteria from caves remains low, at 0.02%, limiting our understanding of microbial community interactions and processes. We have investigated several factors influencing culturability of bacteria from a single sample location in Maxwelton Sink Cave, WV, USA. Extended incubation of inoculated plates showed a significant increase in colony counts from two to four weeks, indicating that extended incubations increase culturability. There were no significant differences in …

Is Fecal Microbiota Transplantation A Safe And Effective Treatment For Gastrointestinal Diseases?, Shaindel Pinsky

The Science Journal of the Lander College of Arts and Sciences

Fecal microbiota transplantation (FMT) is a method of transferring feces from an individual with a healthy microbiome to a patient whose healthy gut bacteria is deficient. While this method is not a new one, it is constantly being explored and studied to determine if it can be an effective way to treat patients with different bowel diseases. The main target of most of these studies are patients with recurrent Clostridium difficile infections. Many studies were done to determine if the method is safe, and which method is most effective, as well as who can be a good donor or recipient …

Evaluation Of Various Barley Processing Methods On Rumen Microbial Population,Histomorphometry, And Fermentation Characteristics In Fattening Lambs, Mohammad Hosseini Zangneh, Masihollah Forouzmand, Mokhtar Khajavi, Shima Hosseinifar, Reza Naghiha

Turkish Journal of Veterinary & Animal Sciences

Barley deserves a top place in the farm for feeding livestock. It is irreplaceable by any other grain in sheep diets for producing capacious rumen microbial yields. The present study was conducted to investigate the effect of different methods of barley processing on a number of microbes, fermentation parameters, and the rumen tissue characteristics of fattening lambs. For this purpose, 20 fattening male lambs with a mean weight of 25 ± 1.1 kg were tested for 80 days based on a completely randomized design with four treatments (GRB: ground barley, SRB: steam-rolled barley, GEB: germinated barley, SOB: soaked barley) and …

Effects Of Oregano (Oreganum Onites L.) Aromatic Water On Rumen Microbialfermentation Of Holstein Calves, Serkan Özkaya, Ozan Emre Almali, Yavuz Ayan, Sabri̇ Erbaş, Taylan Aksu

Turkish Journal of Veterinary & Animal Sciences

The study aimed to determine the effects of the addition of aromatic oregano water (AOW) on rumen fermentation of Holstein calves. For this purpose, 20 Holstein calves were divided into four groups (n = 5) and fed with three different doses of AOW (1, 1.5, and 2%). The experimental groups were formed as follows; the control group (CNT): milk + starter; G1: 1% AOW supplemented milk + starter; G2: 1.5% AOW supplemented milk + starter; G3: 2% AOW supplemented milk + starter. The rumen fluid was taken from the oesophagus at 60 days of age with the aid of a …

Pivot Bio Proven Inoculant As A Source Of Nitrogen In Corn, William G. Davis, Carlos A. Bonini Pires, Dorivar A. Ruiz Diaz, Kraig L. Roozeboom, Charles W. Rice

Kansas Agricultural Experiment Station Research Reports

Nitrogen (N) fertilizer represents a significant annual cost for farmers. Additionally, N losses pose environmental concerns and represent loss of resources. Proven, an N fixing bacterial inoculant for corn developed by Pivot Bio (Berkeley, CA) is expected to fix between 20 and 30 lb N/a over a growing season. The use of bacterial inoculants to fix N for corn reduces the risk of N loss through leaching and volatilization by reducing the amount of inorganic fertilizers required to maximize yield. To evaluate the efficacy of Proven, a field trial was established in Manhattan, KS, on a Kennebec silt loam that …

Diversity And Abundance Of Soil Microbes Differ Along A Forest-Pasture Transect, Hannah Suli, Ashley Schumann, Cleo Bickley, Jasmine Rodriguez

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

No abstract provided.

On The Composistion Of Cymodocea Nodosa Root Exudate Under Artificial Blue, Green And Natural Light Conditions, Armand Martin, Ben Manriquez, Christian Pompa, Aaron Saper, Kyle A. Grice, Jason Bystriansky

DePaul Discoveries

Seagrasses are identified as a sentinel species: a good indicator of overall marine ecosystem health and function. At the rhizome, they are known to interact with marine bacteria by exchanging energy in the form of glucose and free amino acids secreted through root exudate in exchange for microbe-fixated nitrogen that can be utilized for plant growth. To analyze potential outcomes of possible future changes in light availability, an experiment was designed to collect and analyze the root exudate of Cymodocea nodosa under three light conditions (standard fluorescent light, blue LED, and green LED light). After 72 hours of treatment, the …

Culture-Based Analysis Of ‘Cave Silver’ Biofilms On Rocks In The Former Homestake Mine In South Dakota, Usa, Amanpreet K. Brar, David Bergmann

International Journal of Speleology

Tunnels in a warm, humid area of the 1478 m level of the Sanford Underground Research Facility (SURF), located in a former gold mine in South Dakota, USA, host irregular, thin whitish, iridescent biofilms, which appear superficially similar to ‘cave silver’ biofilms described from limestone and lava tube caves, despite the higher rock temperature (32°C) and differing rock surface (phyllite) present at SURF. In this study, we investigated the diversity of cultivable bacteria constituting the cave silver by using several media: CN agar, CN gellan gum and 0.1X R2A agar. The highest colony count (CFU/g of sample) was observed on …

The Biophysical Study Of The Efficacy Of Various Phospholipid Membranes On Daptomycin, Chaya Shor, Tamar Itzkowitz

The Science Journal of the Lander College of Arts and Sciences

Daptomycin is an important lipopeptide antibiotic used in the treatment of systematic and life-threatening infections of the skin and underlying tissue caused by Gram-positive bacteria. Calcium and phosphatidylglycerol (PG) must be present on the target cell membrane for daptomycin’s mechanism of action to proceed. Calcium and PG also promote oligomerization, a formation that has been assumed to aid in the bactericidal process. The purpose of the experiments conducted was to understand the basic biophysical properties of membrane phospholipids as they exist in their pure and mixed monolayer forms. Furthermore, the experiments conducted attempted to discern how daptomycin penetrates the different …

The Role Of Diet In Inflammatory Bowel Diseases, Aviva Smilow

The Science Journal of the Lander College of Arts and Sciences

Inflammatory Bowel Disease encompasses two diseases, Crohn’s Disease and Ulcerative Colitis. During the last 70 years the evolving of diet in the industrialized countries has led to the utilization of foods that have been processed rather than those in their more natural original state. This increase in the processing of foods has been correlated with the more recent occurrence of metabolic diseases such as Inflammatory Bowel Disease. Patients suffering from this problem exhibit lesser amounts of anti-inflammatory bacteria such as Roseburia and Faecalibacterium and increased amounts of pro-inflammatory bacteria Escheria and Fusobacterium. Since diet directly alters the composition of the …

Determining The Minimum Inhibitory Concentration Of Medium Chain Fatty Acids For Generic Escherichia Coli, Enterotoxigenic Escherichia Coli, Salmonella Typhimurium, And Campylobacter Coli, R. A. Cochrane, R. G. Amachawadi, S. E. Remfry, A. B. Lerner, T. G. Nagaraja, J. C. Woodworth, S. S. Dritz, M. D. Tokach, M. C. Niederwerder, C. K. Jones

Kansas Agricultural Experiment Station Research Reports

Research has demonstrated that medium chain fatty acids (MCFA) can serve as reduction strategies for bacterial and viral pathogens in animal feed and ingredients. However, it is unknown how the type or level of MCFA impact bacteria growth. This can be tested through a minimum inhibitory concentration (MIC) benchtop assay, which identifies the lowest concentration of a chemical that prevents visible growth of a bacterium. The objective of this study was to 1) determine the MCFA MIC of C6:0, C8:0, C10:0, and C12:0 for genericEscherichiacoli, EnterotoxigenicEscherichia coli,SalmonellaTyphimurium,Campylobactercoli, andClostridium perfringens; 2) …

Enumeration And Identification Of Selected Bacteria In Water Samples From The Alapahoochee River System, Jenifer Turco Ph.D., James A. Nienow

Georgia Journal of Science

Escherichia coli and enterococci were enumerated in water collected biweekly for one year at ten stations in the Alapahoochee River system. The concentrations of E.coli were usually below a standard of 576 colony forming units (cfu) per 100 ml, except after heavy rain. At five stations the concentrations of enterococci were gener­ally above a standard of 151 cfu/100 ml. Concentrations of both groups showed a direct but weak correlation with pH. For quality control, 772 colonies typical of E. coli and 773 colonies typical of enterococcus were tested by the appropriate verification procedures. Sixty-six (8.5%) of the former, and 57 …

Consciousness Is Not Inherent In But Emergent From Life, Jon Mallatt, Todd E. Feinberg

Animal Sentience

Reber’s theory of the cellular basis of consciousness (CBC) is right to emphasize that we should study consciousness (sentience) in its simplest form, taking its evolution into account. However, not enough evidence is presented to support CBC’s unorthodox claim that even simple, one-celled organisms are conscious. As pointed out by other commentators, the CBC seems to be based on outdated ideas about evolution and does not acknowledge that consciousness could be an evolutionary novel feature. Such emergent features are abundant in living organisms. We review our own emergentist solution, in which consciousness evolved in the elaborating nervous systems of the …

Genetic Sequencing Using 16s Rrna For Pathogen Identification In Retropharyngeal Lymph Nodes From Wild Elk, David J. Wilson, Jacqueline P. Kurz

Human–Wildlife Interactions

Cervical region lymph nodes collected by hunters from 43 wild hunter-harvested elk (Cervus elaphus) in Utah were submitted to the Utah Veterinary Diagnostic Laboratory during fall 2009. We evaluated these lymph nodes as specimens for identification of bacterial pathogens using 16S rRNA genetic sequencing. Thirty-seven bacterial species were identified; each was found in 2 to 30 individual elk. Many common ruminant livestock pathogens were identified in elk; pathogens previously reported in elk were Pasteurella multocida and Streptococcus spp. Cervical region lymph nodes harvested from wild ruminants appear to be acceptable samples for genetic sequencing of bacteria.

Bacteria And The Cellular Basis Of Consciousness, Michael L. Woodruff

Animal Sentience

According to Reber’s theory, the Cellular Basis of Consciousness (CBC), sentience originates as bio-sensitivity in unicellular organisms. For this reason, Reber regards sentience as evolutionarily foundational. Many bacteria show chemotaxis and, thus, according to CBC, they are sentient. Analysis of the genetic mechanisms underlying bacterial chemotaxis indicates that sentience has no explanatory power in this case. Genetic analysis also fails to show species continuity underlying bio-sensitivity in bacteria and bio-sensitivity in species with nervous systems, so it does not seem that sentience is evolutionary foundational. CBC is rejected on these grounds.

Diversity Of Cultured Bacteria From The Perennial Ice Block Of Scarisoara Ice Cave, Romania, Corina Iţcuş, Mădălina-Denisa Pascu, Traian Brad, Aurel Perşoiu, Cristina Purcarea

International Journal of Speleology

Cave ice ecosystems represent a poorly investigated glacial environment. Diversity of cave ice bacteria and their distribution in perennial ice deposits of this underground glacial habitat could constitute a proxy for microbial response to climatic and environmental changes. Scarisoara Ice Cave (Romania) hosts one of the oldest and largest cave ice blocks worldwide. Here we report on cultured microbial diversity of recent, 400, and 900 years-old perennial ice from this cave, representing the first characterization of a chronological distribution of cave-ice bacteria. Total cell density measured by SYBR Green I epifluorescence microscopy varied in the 2.4 x 10⁴ – …

The Historical Biogeography Of Phototrophic Consortium, Emma Ciechanowski

Occam's Razor

A consortium is a close physical association between microbial cells of different lineage (Liu et al. 2013). The phototrophic consortium is an aggregation of two different lineages of bacteria: one large motile bacterium surrounded by many smaller photosynthetic bacteria. They live in freshwater lakes around the world with varying degrees of morphological differences. Bacteria are historically accepted as a ubiquitous species, meaning that if the environment permits them to live there, they will. This hypothesis was first introduced by Beijerinck and Becking in the early 1900s to describe the distribution of microorganisms, with the official mantra being, “everything is everywhere, …

Bacteria Associated With Clinical Postpartum Dysgalactia Syndrome In Farmed Sows In The Republic Of Macedonia, Branko Angjelovski, Aleksandar Cvetkovikj, Slavcho Mrenoshki, Miroslav Radeski, Iskra Cvetkovikj, Marija Ratkova, Toni Dovenski

Turkish Journal of Veterinary & Animal Sciences

The objective of this study was to gather information about the prevalence of bacterial species in farmed sows, with special focus on the clinical manifestation of postpartum dysgalactia syndrome (PDS). One hundred and sixteen sows from 5 pig farms in the Republic of Macedonia were clinically examined for PDS 12?24 h after farrowing. Milk samples and vaginal swabs for bacteriological testing were taken from PDS-affected (PDSA, n = 30) and PDS-unaffected (PDSU, n = 86) sows. Escherichia coli, staphylococci, and streptococci were the predominant bacteria isolates. Escherichia coli was the most frequently found isolate, with a prevalence of 73.3% in …

Bacterial Auxin Signaling: Comparative Study Of Growth Induction In Arabidopsis Thaliana And Triticum Aestivum, Basharat Ali

Turkish Journal of Botany

Auxin-producing rhizobacteria were evaluated for the role of their auxin signaling in enhancing the growth of Arabidopsis thaliana (L.) Heynh. and Triticum aestivum L. Arabidopsis thaliana wild type Columbia (Col-0) in comparison with phytohormone mutant lines aux1-7 (insensitive to auxin and ethylene), axr4-1 (insensitive to auxin), and eir1-1 (insensitive to ethylene) was used as a model system. Bacterization of wild type Col-0 recorded significant increases in shoot length (38%) and number of siliqua (180%) with Bacillus subtilis TpP-1 over the controls. Inoculation with aux1-7 and axr4-1 showed statistically comparable results for growth parameters as compared to their respective controls. Treatment …