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Full-Text Articles in Life Sciences

Genetic Effects Of Anthropogenic Disturbance On Native Charrs, Brad Erdman Aug 2023

Genetic Effects Of Anthropogenic Disturbance On Native Charrs, Brad Erdman

Electronic Theses and Dissertations

Artificial propagation has been utilized for over a century to offset anthropogenic declines of abundance for many fishes. Complex and poorly documented histories of habitat degradation and stockings have resulted in considerable uncertainty regarding whether contemporary populations are of native, hatchery, or mixed origins. This uncertainty is problematic as it precludes prioritizing the conservation of native populations that are postulated to possess local adaptations and greater evolutionary potential. Population genetics can assess the relative reproductive contributions of previous stocking events and in this dissertation I apply these methods to four empirical studies of native charr (genus Salvelinus) that have …


An Exploration Of Palauan Fishing Methods And Fisheries: A Study For The Conservation Of Dugongs, Mia Glover Jun 2023

An Exploration Of Palauan Fishing Methods And Fisheries: A Study For The Conservation Of Dugongs, Mia Glover

Electronic Theses and Dissertations

The dugong (Dugong dugon) is an important marine mammal in Palau. However, current population dynamics are not well understood. This study aimed to connect scientific data with local knowledge by examining the social implications of changing fishing methods and their impact on dugong population dynamics in the face of climate change and fisheries commercialization. Through interviews with local fishers, it was found that destructive fishing methods like trawling and long lining have led to habitat loss and degradation for dugongs. These tactics, driven by economic factors, have disrupted the delicate balance between human activities and the preservation of dugong habitats, …


Detecting Native Freshwater Mussels In Pennsylvania Waterways: Comparison & Validation Of Environmental Dna Methods, Meredith Bennett May 2023

Detecting Native Freshwater Mussels In Pennsylvania Waterways: Comparison & Validation Of Environmental Dna Methods, Meredith Bennett

Electronic Theses and Dissertations

North America is home to approximately one third of the world's freshwater mussel species. They are highly imperiled organisms due to habitat destruction and invasive species. Traditional surveys rely on visual identification of mussels, but individuals tend to be rare and difficult to identify. An alternative method is to extract environmental DNA (eDNA) from water samples, which has advantages over traditional sampling, including less sampling effort and fewer hazards to researchers and organisms. We conducted a review of the two main eDNA approaches: single-species detection and metabarcoding. We also developed and validated metabarcoding primers for the detection of native mussels. …


Dolphin Behavioral Responses To Uncrewed Aerial Systems As A Function Of Exposure, Height, And Type, Savannah Damiano May 2023

Dolphin Behavioral Responses To Uncrewed Aerial Systems As A Function Of Exposure, Height, And Type, Savannah Damiano

Electronic Theses and Dissertations

Uncrewed aerial systems (UAS) are becoming a standard tool in the study of cetaceans, however, a comparative assessment of animal responses to UAS has not been established to gauge the most effective systems for cetacean study. We utilized Dolphin Quest Bermuda’s eleven bottlenose dolphins as subjects for such an investigation taking place over five weeks in 2022 and five weeks in 2023. The dolphins were evaluated for investigative behavioral responses to six off-the-shelf UAS types and a custom fixed wing system. Each UAS was flown in decreasing height vertically above the main dolphin lagoon to evaluate dolphin behavioral responses in …


Flora Of Doe Mountain Recreation Area, Johnson County, Tennessee, Benjamin Mccullough Aug 2022

Flora Of Doe Mountain Recreation Area, Johnson County, Tennessee, Benjamin Mccullough

Electronic Theses and Dissertations

A botanical inventory of Doe Mountain Recreation Area (DMRA) in northeastern Tennessee was conducted to help guide conservation-based management. A total of 484 species were found in DMRA, comprising 94 families, and 285 genera, 10 species listed in the state rare plant list, and 76 exotic species. Two species, Liatris virgata and Lycopodiella inundata, were new state records. Water in the Lycopodiella seep was an order of magnitude more acid than at other sites. An analysis of the wildland-urban interface showed that only 13% of the area was classified as uninhabited. The inventory-invasion index, introduced to quantify the relative …


Evaluating Bat Roost Abundance: A Comparison Of Drone-Acquired Thermal Imagery And Acoustic Estimates With Visual Observations, Karah Jaffe Aug 2022

Evaluating Bat Roost Abundance: A Comparison Of Drone-Acquired Thermal Imagery And Acoustic Estimates With Visual Observations, Karah Jaffe

Electronic Theses and Dissertations

Roosts provide an opportunity to census philopatric populations of bats. Comparing the efficacy of traditional methods with novel methods can provide guidance on the use of new technologies in the field. This project aims to compare the count efficacy of external emergence methodologies, i.e., drone-acquired thermal imagery, acoustic estimates, and visual counts. Surveys were conducted ten nights at two emergence sites and synchronized to compare counts. Acoustic estimates could not be established as there was a weak prediction of the linear relationship between root-mean-square pressure and emergence count; therefore, this method was removed from the comparative analysis. A linear mixed-effects …


The Paleoecology Of High-Elevation Bison In The Greater Yellowstone Ecosystem And Implications For Modern Bison Conservation, Darian Bouvier Aug 2022

The Paleoecology Of High-Elevation Bison In The Greater Yellowstone Ecosystem And Implications For Modern Bison Conservation, Darian Bouvier

Electronic Theses and Dissertations

The national mammal of the United States, the American Bison (Bison bison) was once nearly extinct. Populations have recovered to the degree that thousands roam the Great Plains today. Due to their large numbers and body size, this species has an oversized impact on the ecological communities where it lives and is considered a keystone herbivore in modern North American grasslands. This study explores the detailed, seasonally resolved, paleoecology of seven bison from the Greater Yellowstone Ecosystem during the Late Holocene through stable isotope analyses and species niche modeling. Isotopic analyses of δ13C, δ15N, …


Detection, Occupancy, Abundance, And Mercury Accumulation Of The Alligator Snapping Turtle (Macrochelys Temminckii) In Texas, David Rosenbaum May 2022

Detection, Occupancy, Abundance, And Mercury Accumulation Of The Alligator Snapping Turtle (Macrochelys Temminckii) In Texas, David Rosenbaum

Electronic Theses and Dissertations

Land use practices and physical alterations of ecosystems result in habitat loss and fragmentation, while chemical alterations, such as pollutant input, reduce habitat quality and health of exposed organisms. Here, I investigated the effects of watershed- and local-scale environmental variables on the occupancy, abundance, and mercury accumulation of a threatened aquatic species (Macrochelys temminckii, i.e., alligator snapping turtle) within the southwestern periphery of its distribution. Hierarchical modeling suggested the distribution of the species is more affected by watershed-scale land-cover than local habitat, and provided a baseline estimate of average species abundance across its range in eastern Texas. Abundance …


Spatiotemporal Factors Affecting The Occupancy And Phenology Of A Declining Songbird (Bachman's Sparrow - Peucaea Aestivalis) At The Western Extent Of Its Range, Liam G. Wolff May 2022

Spatiotemporal Factors Affecting The Occupancy And Phenology Of A Declining Songbird (Bachman's Sparrow - Peucaea Aestivalis) At The Western Extent Of Its Range, Liam G. Wolff

Electronic Theses and Dissertations

The Bachman’s Sparrow (Peucaea aestivalis) is a declining songbird that occurs throughout the southeastern United States. Bachman’s Sparrow is a Species of Greatest Conservation Need in Texas, but information crucial to management efforts, such as factors affecting their detectability and occupancy, is lacking. I investigated the predictors of Bachman’s Sparrow occupancy and phenology in Texas using detections from autonomous recording units coupled with site characteristics and weather data. My results indicate that Bachman’s Sparrow occupancy is associated with increasing herbaceous ground cover and decreasing basal area, distance to the nearest source population, and basal area when canopy height …


Effects Of Conservation Management Practices On Soil Health And Crop Yields In Eastern South Dakota, Alex Mclain Jan 2022

Effects Of Conservation Management Practices On Soil Health And Crop Yields In Eastern South Dakota, Alex Mclain

Electronic Theses and Dissertations

Conservation management practice adoption on agricultural land has increased in recent years due to increasing public and private investment. The anticipated impact of increasing conservation management practice adoption are reduced greenhouse gas emissions and improved soil, water, and air quality. Understanding how these conservation management practices affect agricultural producers economically is vital to properly incentivize these practices. The existing literature on how conservation management practices affect soil health and crop yields is mixed and generally has been conducted on experimental research stations. These studies may not fully account for the on-farm effects of conservation management practices. The objectives of this …


Regenerative Agriculture Effects On Invertebrate And Bird Communities And Insect-Provided Ecosystem Services, Alex Michels Jan 2022

Regenerative Agriculture Effects On Invertebrate And Bird Communities And Insect-Provided Ecosystem Services, Alex Michels

Electronic Theses and Dissertations

Conventional agricultural practices can have unintended consequences on the environment and wildlife. Insects and birds are declining at rapid rates around the world, and the current conventional agricultural paradigm is a major driver through habitat loss and the intensification of production. Invertebrates in agroecosystems provide services to both farmers and the rest of society. Regenerative systems may promote the functioning of an agroecosystem by influencing invertebrate abundance, diversity, and ecosystem services and mitigate bird and insect declines through conservation practices that increase soil health, reduce disturbances, and increase biological diversity. Here I address knowledge gaps of the effects of regenerative …


The Effects Of Acid Rain Mitigation Efforts On The Behaviour-Dependent Movement Of Migrating Atlantic Salmon (Salmo Salar, L.) Smolts, Omar Salem Taboun Aug 2021

The Effects Of Acid Rain Mitigation Efforts On The Behaviour-Dependent Movement Of Migrating Atlantic Salmon (Salmo Salar, L.) Smolts, Omar Salem Taboun

Electronic Theses and Dissertations

Acidification has led to changes in the chemistry of fresh waters and has impacted the survival of Atlantic Salmon (Salmo salar), an endangered anadromous fish species. Liming, which has been implemented to restore freshwater ecosystems, has been demonstrated to restore a suitable pH for Atlantic Salmon, however, it remained unknown to what extent liming can restore the underlying behavioural traits and migration behaviour of smolts. We captured 116 smolts from two freshwater river treatments in Nova Scotia, Canada: acidified Little River (n=17) and lime-treated West River (n=99). We performed stream-side behavioural assays and discerned five behavioural metrics: (1) …


Pollinator Ecology In Agroecosystems Of Eastern South Dakota, Isabela Beatriz Vilella-Arnizaut Jan 2021

Pollinator Ecology In Agroecosystems Of Eastern South Dakota, Isabela Beatriz Vilella-Arnizaut

Electronic Theses and Dissertations

Community structure contributes to ecosystem persistence and stability. To understand the mechanisms underlying pollination and community stability of natural areas in a human influenced landscape, a better understanding of the interaction patterns between plants and pollinators in disturbed landscapes is needed. Furthermore, understanding the potential conservation value in green spaces such as botanical gardens could assist in preserving and bolstering plant-pollinator interactions. Our study takes place in the Northern Great Plains which still retains extensive tracts of remnant temperate grassland habitat within a matrix of varying land-uses. First, we used a network-based approach to quantify how temperate grassland attributes and …


Monarch Butterfly (Danaus Plexippus) Roost Site-Selection And Viability East Of The Appalachian Mountains, Brandon Boxler Dec 2020

Monarch Butterfly (Danaus Plexippus) Roost Site-Selection And Viability East Of The Appalachian Mountains, Brandon Boxler

Electronic Theses and Dissertations

The Monarch butterfly is a flagship species and pollinator whose populations have declined by approximately 85% in the last two decades. Their largest population overwinters in Mexico, then disperses across the eastern United States and Canada during April to August. Between September-December, the butterflies return south using two migratory flyways, one spanning the central United States and another following the Atlantic coast. They fly during the day and at night roost in large groups. Roosting habitat is essential to the continuation of the Monarchs’ migration, however, threats such as anthropogenic habitat disturbance and climate change potentially endanger sustainability of these …


Distribution, Density, Movement, And Support For Management Of Mountain Sucker, Pantosteus Jordani, In The Black Hills Of South Dakota, Seth J. Fopma Jan 2020

Distribution, Density, Movement, And Support For Management Of Mountain Sucker, Pantosteus Jordani, In The Black Hills Of South Dakota, Seth J. Fopma

Electronic Theses and Dissertations

Mountain Sucker, Pantosteus jordani, is a cold-water species native to the Intermountain West. Fringe populations of Mountain Sucker have experienced declines in recent decades. The population of Mountain Sucker found in the Black Hills of South Dakota represents the eastern fringe of the species’ native range. Recognized as both an indicator of biologic health and as a species of greatest conservation need in South Dakota, recent studies have suggested significant declines in both distribution and abundance. Despite the recent study of Mountain Sucker in the region, increased understanding of Mountain Sucker ecology is needed to effectively manage for the conservation …


Diversification In The Neotropics – Evolution And Population Genetics Of The Armored Catfish Hypancistrus Sp. From The Xingu River, Marcella Goncalves Santos Jan 2019

Diversification In The Neotropics – Evolution And Population Genetics Of The Armored Catfish Hypancistrus Sp. From The Xingu River, Marcella Goncalves Santos

Electronic Theses and Dissertations

The Xingu River, one of the largest tributaries of the Amazon River, is currently in peril due to the recent construction of hydroelectric dams, but little is known about the numerous fish species it supports. This dissertation focuses on three pleco catfish species belonging to the genus Hypancistrus from the Xingu River with partially overlapping distributions: H. zebra, H. sp. (L174), and H. sp. (L66/333). Chapter 1 is a bibliographic review of Amazonian freshwater fish diversity, with the goal of discussing the hypotheses of speciation mechanisms that can be tested in this system, including the relative importance of ecological adaptation …


Examining The Role Of Reproductive Interference In The Decline Of Native Green Treefrogs Following Cuban Treefrog Invasions, Joseph Kennedy Jan 2019

Examining The Role Of Reproductive Interference In The Decline Of Native Green Treefrogs Following Cuban Treefrog Invasions, Joseph Kennedy

Electronic Theses and Dissertations

Reproductive interference occurs when the mating behaviors of one species negatively impact the fitness of another species. It is of increasing interest in invasive species biology because the introduction of alien species often leads to novel sexual interactions with native taxa, which can contribute to their decline. I examined whether reproductive interference plays a role in the decline of native green treefrogs (Hyla cinerea) following invasions of Cuban treefrogs (Osteopilus septentrionalis) in the southeastern United States. The impetus for this study revolves around similarities in spectro-temporal features of Cuban treefrog courtship calls and green treefrog aggressive calls. The significance of …


Delineating Metrics Of Diversity For A Snake Community In A Rare Ecosystem, Zachary John Marcou Aug 2018

Delineating Metrics Of Diversity For A Snake Community In A Rare Ecosystem, Zachary John Marcou

Electronic Theses and Dissertations

Snakes are among the least understood vertebrate groups despite their considerable diversity. A diverse community of snakes in an ecosystem can indicate a complex habitat structure that is capable of supporting a robust assemblage of other biota. I used remote photography arrays (RPA) to quantify metrics of diversity for the snake community occurring in a ~7,000–ha tract of contiguous Longleaf Pine (Pinus palustris) Savanna within the Angelina National Forest (ANF; Angelina and Jasper Cos., TX), over the course of two consecutive snake activity seasons. I quantified the snake species richness, Shannon diversity, and Shannon equitability for the snake community in …


Biodiversity And Evolution In The Guiana Shield, South America, Andrew Michael Snyder Jan 2018

Biodiversity And Evolution In The Guiana Shield, South America, Andrew Michael Snyder

Electronic Theses and Dissertations

The neotropics are characterized as the most species rich region in the world. Unfortunately, the region's unparalleled biodiversity has not protected it from ongoing threats such as agriculture, mining, logging, oil extraction, and climate change. I studied the biodiversity and evolution of the herpetofauna of South America in order to investigate the influence of historical geological and climatological events in shaping extant neotropical diversity, particularly the Guiana shield. For my research, I set out to explore the processes involved in shaping the remarkable extant diversity using anuran amphibians as models. With my dissertation, I provide a comprehensive review of the …


Evaluating Elasmobranch Bycatch And Shark Depredation In The Georgia Shrimp Fishery, Matthew M. Scanlon Jan 2018

Evaluating Elasmobranch Bycatch And Shark Depredation In The Georgia Shrimp Fishery, Matthew M. Scanlon

Electronic Theses and Dissertations

The Georgia shrimp fishery has seen a dramatic decrease in profit and productivity since the 1980’s due to a number of economic factors. Additional, yet undocumented, pressures on this fishery include interactions between foraging sharks with trawl gear. Fishermen report that sharks frequently bite nets in an attempt to prey on netted fish, resulting in large holes in the gear. Further elasmobranch interactions with trawl gear occur as bycatch; shrimp trawls represent nearly 100% of elasmobranch commercial bycatch in Georgia state waters, the species composition of which is largely unstudied. Shark interactions with nets were detailed through fishery-dependent observations on …


Niche Modeling For The Giant Panda, Ailuropoda Melanoleuca, And The Original Panda, Ailurus Fulgens: Habitat Preferences And Evolutionary Consequences, Lauren M. Lyon May 2017

Niche Modeling For The Giant Panda, Ailuropoda Melanoleuca, And The Original Panda, Ailurus Fulgens: Habitat Preferences And Evolutionary Consequences, Lauren M. Lyon

Electronic Theses and Dissertations

The well-known symbol for conservation, the giant panda bear, and the original red panda have been forced into remote habitats due to anthropogenic disturbance, making ecological study difficult. Therefore the first known species distribution model was created to predict the most likely areas of occurrence within the known range of these elusive animals. These models were then projected onto North America and evaluated against existing breeding programs. Additionally, the close proximity of the Gray Fossil Site and the discovery of the most complete fossil red panda specimens in the world allowed ecomorphological comparisons between the modern red panda, Ailurus fulgens …


Approaches To Arthropod Conservation : Landscape Genetics, Community Assessment, And Prediction Of Extinction Risk., Victoria Annette Prescott Dec 2016

Approaches To Arthropod Conservation : Landscape Genetics, Community Assessment, And Prediction Of Extinction Risk., Victoria Annette Prescott

Electronic Theses and Dissertations

Although urbanization is a leading cause of species extinction throughout the world, the impact of urban development on arthropods is little studied and, as a result, poorly understood. I used three distinct approaches to studying arthropod conservation in North America. First, I used landscape genetics techniques to study the impact of urbanization on gene flow among populations of Rabidosa rabida, the rabid wolf spider. While gene flow was not detrimentally reduced, urban development correlated with a reduction in migration rates among populations, and to my knowledge, this is the first study to document isolation by resistance in spiders. Next, …


Differences In Habitat At Two Spatial Scales Fail To Predict Differing Occurrences Of Three Species Of Wintering Ammodramus Sparrows In South Carolina Salt Marshes, Kimberly A. Trinkle Jan 2013

Differences In Habitat At Two Spatial Scales Fail To Predict Differing Occurrences Of Three Species Of Wintering Ammodramus Sparrows In South Carolina Salt Marshes, Kimberly A. Trinkle

Electronic Theses and Dissertations

Salt marshes have low levels of vertebrate diversity yet extremely high rates of endemism. Two of these endemic species are the Saltmarsh (Ammodramus caudacutus) and Seaside Sparrow (A. maritima); the closely related Nelson's sparrow (A. nelsoni) winters exclusively on salt marshes. A previous winter study found that individual sparrows of all three species were highly faithful to specific banding sites, and that the relative abundances of the three species differed by site. I hypothesized that the reason sparrow assemblages varied among sites was that the three species' winter habitat requirements were different. All three species winter in salt marshes, but …


Conservation Genetics And Distribution Of The Yazoo Darter (Etheostoma Raneyi), Kenneth Alan Sterling Jan 2011

Conservation Genetics And Distribution Of The Yazoo Darter (Etheostoma Raneyi), Kenneth Alan Sterling

Electronic Theses and Dissertations

The Yazoo Darter is a range-restricted endemic fish in north-central Mississippi. Because the limited and fragmented range of this species puts it at risk of extinction, the Yazoo Darter has been classified as vulnerable or sensitive by several agencies and conservation organizations. However, the actual conservation status of this species is uncertain. Information necessary for conservation management is relatively sparse and is scattered among published and unpublished sources, particularly collection records. I have consolidated all known collection records for this species into a standardized database which has not only yielded valuable information presented here, but will provide a resource for …


Factors Affecting Predation Of Marine Turtle Eggs By Raccoons And Ghost Crabs On Canaveral National Seashore, Fl, Justin Brown Jan 2009

Factors Affecting Predation Of Marine Turtle Eggs By Raccoons And Ghost Crabs On Canaveral National Seashore, Fl, Justin Brown

Electronic Theses and Dissertations

Changes in abundance of interactive species can have cascading, community-wide effects (Soule et al. 2003). Raccoons (Procyon lotor) prey on a competitor for marine turtle eggs, the Atlantic ghost crab (Ocypode quadrata). Conservation of marine turtles often includes managing raccoons-the most obvious egg predator-which may have broader ecological effects, and unknown effects on egg predation. Neither the relationship between raccoons and ghost crab density nor the effects of ghost crab density on egg predation are well understood. I studied raccoon-ghost crab interactions and the effects of environmental variation on their activity during the 2007 marine turtle nesting season on Canaveral …