Life Sciences Commons^™

Xenopus Laevis As A Model Organism, David C. Cannatella, Rafael O. De Sá

Biology Faculty Publications

Model organisms are often assumed to be representative of some more inclusive taxon of which the species is a part. This assumption leads to mistaken generalizations about the evolutionary and comparative significance of the data gathered. This paper reviews com? parative and evolutionary studies of Xenopus laevis and its relatives. Phylogenetic analysis of data from DNA sequences and morphology indicate that Xenopus is monophyletic and that Silurana is its sister group. The most basal lineages of Pipidae diverged prior to the breakup of Gondwana. The bizarre morphology of Xenopus is in part due to changes in the mode of meta? …

Bone As A Spring, Frank E. Fish

Biology Faculty Publications

No abstract provided.

Gal4 Disrupts A Repressing Nucleosome During Activation Of Gal1 Transcription In Vivo, Jeffrey D. Axelrod, Michael S. Reagan, John Majors

Biology Faculty Publications

Photofootprinting in vivo of GALl reveals an activation- dependent pattern between the UASG and the TATA box, in a sequence not required for transcriptional activation by GAL4. The pattern results from a nucleosome whose position depends on sequences within the UASG. In the wild-type gene, activation by GAL4 and derivatives disrupts this nucleosome. This activity is independent of interactions with DNA-bound core transcription factors and is proportional to the strength of the activator. Presence of the nucleosome correlates with low basal transcription levels under various conditions, suggesting a role in limiting basal expression. We propose a role for the GAL4 …

Ribosomal Dna And The Phylogeny Of Frogs, David M. Hills, Loren K. Ammerman, Michael T. Dixon, Rafael O. De Sá

Biology Faculty Publications

Phylogenetic analysis of 1656 aligned sites in the 28S ribosomal RNA gene of frogs supports some of the recently recognized higher groups of anurans but provides counter-support for others. The 28S rDNA data support the monophyly of the recently recognized Pipanura (me- sobatrachians plus neobatrachians), which in turn indicates paraphyly of archaeobatrachians. Me- sobatrachians (pelobatoids plus pipoids), which are either considered paraphyletic or weakly sup- ported as monophyletic in morphological analyses, also receive support as a monophyletic group from the 28S rDNA data. Hyloidea (=Bufonoidea), which is widely recognized but lacks morphological support, receives some molecular support as being monophyletic. …

Genotypic Diversity In Populations Of A Fungal Endophyte From Douglas-Fir, Timothy L. Mccutcheon, George C. Carroll, Suzanne Schwab

Biology Faculty Publications

Rhabdocline parkeri, an endophyte of Douglas fir, forms symptomless infections within single epidermal cells of healthy needles. Rhabdocline parkeri strains were isolated from trees growing in various habitats ranging from virgin old growth forests to a single young tree growing isolated in a meadow. Different genotypes of R. parkeri were distinguished by using the Random Amplified Polymorphic DNA (RAPD) technique. A significantly lower number of R. parkeri genotypes per unit foliage were isolated from trees within a 20-year-old managed stand and from an isolated tree than from old growth trees. Foliage from young trees (20 years old) in a stand …

Mouse Heparin Binding Protein-44 (Hbp-44) Associates With Brushin, A High-Molecular-Weight Glycoprotein Antigen Common To The Kidney And Teratocarcinomas, Masaru Nakamoto, Masayuki Ozawa, Sonia Jacinto, Tatsuhiko Furukawa, Yasuhiro Natori, Hiroshi Shirahama, Suguru Yonezawa, Tatsuo Nakayama, Takashi Muramatsu

Biology Faculty Publications

Heparin binding protein-44 (HBP-44) is a heparin binding protein of 44 kDa, found by cDNA cloning using antibodies against teratocarcinoma glycoproteins [Furukawa, T. et al. (1990) J. Biochem. 108, 297-302]. The N-terminal sequence analysis reported in this publication establishes the structure of its mature form. Immunohistochemical staining revealed that HBP-44 was located in the tubular brush border of the kidney. HBP-44 formed a complex with brushin, a high molecular weight (460 kDa) glycoprotein antigen common to the kidney and teratocarcinoma, but not with OR8 antigen, another antigen (350 kDa) of the same category. Brushin was shown to be the mouse …

Wood Anatomy Of Amanoa (Euphorbiaceae), W. John Hayden, Mark P. Simmons, Linda J. Swanson

Biology Faculty Publications

Wood anatomy of 29 specimens of seven species of Amanoa from tropical Africa, South America, and the Caribbean is described. The wood is diffuse-porous with most vessels in short radical multiples. Vessel elements are notably long, have simple perforation plates and small, alternative intervessel pits; tyloses are present in heartwood. Libriform wood fibres bear thick walls. Axial parenchyma distribution is diffuse and diffuse-in-aggregates. Chambered crystalliferous axial parenchyma is common. Rays are heterocellular, narrow, and very tall. The species examined, all from moist lowland forests, have similar wood structure. Wood of Amanoa resembles that of other primitive Euphorbiaceae.

Morfología Y Moléculas: Bases Complementarias De La Sistemática Moderna, Rafael O. De Sá, David M. Hillis

Biology Faculty Publications

RESUMEN

El auge de las técnicas moleculares en las últimas dos décadas ha traído nuevos enfoques en los estudios sistemáticos. Aquí presentaremos una revisión del uso, las aplicaciones, y los problemas de las principales metodologías de trabajo. Cada una de estas técnicas es aplicable a algunos problemas e inapropiada para otros, y es importante entender las suposiciones y limitaciones de cada técnica. Concluimos que el uso combinado de los enfoques morfológicos y moleculares otorga mejor resolución a los problemas sistemáticos.

ABSTRACT

The development of molecular techniques during the last two decades has brought new approaches to the analysis of systematic …

A Comparative 2-Dimensional Gel Protein Database Of The Intact And Regenerating Newt Limbs, Panagiotis A. Tsonis

Biology Faculty Publications

In this paper we describe a two-dimensional gel database of the regenerating newt limb. Protein synthesis was compared in the intact limb, in the 1-week regenerating limb, representing the dedifferentiation stage, and in the 2-week regenerating limb, representing the formation of the blastema. This comparative database provided data on differential expression of about 800 proteins during the process of limb regeneration. In addition, a map has been generated for these proteins for future guidance in characterizing further new, unknown proteins. The overall expression patterns of the proteins indicated that the dedifferentiation stage was marked by down-regulation of most proteins, while …

The Nfiii/Oct-1 Binding Site Stimulates Adenovirus Dna Replication In Vivo And Is Functionally Redundant With Adjacent Sequences, Lianna K. Etchberger, P. Hearing

Biology Faculty Publications

The inverted terminal repeat (ITR) of adenovirus type 5 (Ad5) is 103 bp in length and contains the origin of DNA replication. Cellular transcription factors NFI/CTF and NFIII/OCT-1 bind to sites within the ITR and participate in the initiation of viral DNA replication in vitro. The ITR also contains multiple copies of two conserved sequence motifs that bind the cellular transcription factors SP1 and ATF. We have analyzed a series of viruses that carry deletions at the left terminus of Ad5. A virus carrying a deletion of the NFIII/OCT-1, SP1, and ATF sites within the ITR (mutant dl309-44/107) was wild …

Floristic Diversity In Ten Tallgrass Prairie Remnants Of Eastern Nebraska, Judith F. Boettcher, Thomas B. Bragg, David M. Sutherland

Biology Faculty Publications

Ten eastern Nebraska tallgrass prairie remnants, varying in size from one to 18 ha, were studied or visited during the growing seasons from 1979 to 1993. A total of217 prairie plant species were recorded. Big bluestem (Andropogon gerardii), little bluestem (Andropogon scoparius), smooth brome (Bromus inermis subsp. inermis), New Jersey tea (Ceanothus herbaceus var. pubescens), false sunflower (Heliopsis helianthoides var. scabra), Kentucky bluegrass (Poa pratensis), and porcupine-grass (Stipa spartea) were prevalent in all the prairies although the specific floristic composition has been reported to vary depending on past management, topography, season of evaluation, and prairie size. Of the total species …

Woody Vegetation Of A Disjunct Bur Oak (Quercus Macrocarpa) Forest In East-Central Nebraska, Debra Ann Beightol, Thomas B. Bragg

Biology Faculty Publications

Woody plant composition was assessed for three tree-size classes in two ravines of Oak Glen Wildlife Management Area, a disjunct oak forest in Seward County, Nebraska, using Importance Values (IV) obtained by the Point-Quarter method. Bur oak (Quercus macrocarpa Michx.) dominated the large-size class (>30 cm dbh) (IV = 258) but elms (Ulmus americana L. and U. rubra Muhl.) (IV = 130) dominated the forest in one ravine in the medium-size class (10-30cm dbh) and elm and hackberry (Celtis occidentalis L.) (IV = 114 and 27 respectively) dominated the small-size class (

Review Of American Wildflower Florilegium By Jean Andrews, David M. Sutherland

Biology Faculty Publications

This book is a collection of 50 watercolor paintings of American wildflowers ("florilegium" means, literally, "a gathering of flowers"). Accompanying each full-page painting is a summary of general information about the plant, including notes about its botanical classification, the etymology of its name, life history, distribution, description, flowering period, pollination, and propagation.