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Articles 1 - 30 of 56
Full-Text Articles in Life Sciences
Biomechanics Of Mantis Prey Capture, Danielle S. Taylor
Biomechanics Of Mantis Prey Capture, Danielle S. Taylor
Honors Theses
Mantis species have a variety of different morphologies, so do the extreme forms of mantis limbs trade prey catching capability for camouflage? We hypothesize that some extreme forms of mantis limbs that are associated with cryptic species may be associated with a tradeoff of the capability of those limbs. Previous research has developed 2D morphologies of several hundred species of mantises. We are creating a 3D morphology by using micro dissection, micro CT imaging to construct our 3D biomechanical model. We found the attachment points of the ligaments and muscles from a Tenodera forearm and have constructed a 2D biomechanical …
Legacies Align With Colby’S Acquisition Of Allen And Benner Islands, Bob Keyes
Legacies Align With Colby’S Acquisition Of Allen And Benner Islands, Bob Keyes
Colby Magazine
The College creates a 500-acre island campus in Muscongus Bay
Rapid Response: Cat-Scan Machine And 3d Printers Vital In Covid-19, Laura Meader
Rapid Response: Cat-Scan Machine And 3d Printers Vital In Covid-19, Laura Meader
Colby Magazine
Colby’s Assistant Professor of Biology Josh Martin is using his expertise and sophisticated scientific equipment to create face shields, respirator masks, and air filter cartridges for local first responders and hospitals in need of equipment that is crucial to treating patients with COVID-19.
Modeling Jadera Haematoloma’S Phenotypic Variation In The Context Of Its Developmental Plasticity, Michael C. Yorsz
Modeling Jadera Haematoloma’S Phenotypic Variation In The Context Of Its Developmental Plasticity, Michael C. Yorsz
Honors Theses
Phenotypic plasticity is the ability of an organism to integrate information from environmental cues to inform the development of its phenotype and remains understudied in biology. Models of plasticity are needed because evolution in the presence of plasticity is poorly understood. Jadera haematoloma, a hemimetabolous true bug, is an excellent animal model of plasticity, exhibiting a non-linear plastic response to juvenile nutrition that biases adult development into groups with differences in flight capability, wing shape, and fecundity. However, there is a lack of literature consensus regarding the range of developmental outcomes in the species. Some publications report the presence …
Use Of Small Molecule Fanconi Anemia Pathway Inhibitors As Sensitizing Agents To Laromustine., Sam W. Marchant
Use Of Small Molecule Fanconi Anemia Pathway Inhibitors As Sensitizing Agents To Laromustine., Sam W. Marchant
Honors Theses
Laromustine is an experimental chemotherapeutic sulfonyl hydrazine prodrug shown in clinical trials to be effective against acute myeloid leukemia. The mechanism of action of laromustine involves interstrand crosslinking, via chloroethylation, and enzyme inhibition, caused by carbamoylation. The work described herein aims to investigate whether inhibition of the replication-dependent interstrand crosslink repair Fanconi Anemia pathway further sensitizes cells to laromustine. By measuring metabolic activity immediately after drug exposure, we find laromustine to be equally as cytotoxic towards Fanconi Anemia deficient and wild type cells. However, through clonogenic assays we show Fanconi Anemia mutations sensitize cells to laromustine’s anti-proliferative effect. Furthermore, we …
Big Data: Computational Biology Opens A New Window On The World's Challenges For Colby Scientists, Kate Carlisle
Big Data: Computational Biology Opens A New Window On The World's Challenges For Colby Scientists, Kate Carlisle
Colby Magazine
"What makes us 'us' and not a plant? Not a bacteria, or a virus," asks Andrea Tilden, the J. Warren Merrill Associate Professor of Biology and a genomics expert. "Any one genome has six thousand novels worth of information. Computational biology is the tool we use to read them."
Collaboration: Professor And Former Protégé Are Finding Answers To Nature's Questions, Gerry Boyle
Collaboration: Professor And Former Protégé Are Finding Answers To Nature's Questions, Gerry Boyle
Colby Magazine
Biologist Dave Angelini and collaborator Will Simmons '17J have published findings of their three-year study of the effect of pesticides on bumblebees and hope the results will have the scientific community looking for new solutions to the problem.
Science Phobic?: Professor Frank Fekete Can Fix That - And, Perhaps, Some Global Problems, Abukar Adan
Science Phobic?: Professor Frank Fekete Can Fix That - And, Perhaps, Some Global Problems, Abukar Adan
Colby Magazine
"It shouldn't be a surprise. Of any subdiscipline in biology, microbiology is the most relevant to my students' lives because everyone is concerned about his or her health." - Frank Fekete, professor of biology
Protein Kinase Activity Toward Taabf1 In Imbibing Grains, Taylor P. Enrico
Protein Kinase Activity Toward Taabf1 In Imbibing Grains, Taylor P. Enrico
Honors Theses
The hormones gibberellin and abscisic acid are essential for plant responses to changing environmental conditions, and can send opposing signals. In wheat, the transcription factor TaABF1 plays an important role at the intersection of a gibberellin-induced/abscisic acid-suppressed pathway. When gibberellin dominates, the GA-induced gene, Amy32b, is transcribed. When abscisic acid is dominant, TaABF1 is active and it downregulates GA-induction of Amy32b, while promoting ABA-induced transcription of the gene HVA1. The activity of TaABF1 is thought to be regulated by post-translational phosphorylation at key serine residues. In this study, to determine TaABF1 phosphorylation by wheat kinases, we purified recombinant …
Sweating The Small Stuff: Linking Plankton To Climate Change, Brian Kim '18 Makes Conncetions, Stephen Collins
Sweating The Small Stuff: Linking Plankton To Climate Change, Brian Kim '18 Makes Conncetions, Stephen Collins
Colby Magazine
It takes an expansive mind to connect microscopic marine copepods (certain crustacean plankton) unwittingly chomping on floating microplastics with a bigger picture: the planet’s carbon pump and global climate change. But that’s what Brian Kim ’18 decided to investigate during Jan Plan, working with Bigelow Lab Senior Research Scientist David Fields.
Analysis Of Current Clinical Antiviral Treatment Approaches And Medications And Related Suggestions For Future Research, Daniel Sunderland
Analysis Of Current Clinical Antiviral Treatment Approaches And Medications And Related Suggestions For Future Research, Daniel Sunderland
CLAS: Colby Liberal Arts Symposium
Viral pathogens present researchers, physicians, and public health workers with the challenges of developing new treatments in an every-changing landscape of antiviral drug resistance. This paper outlines the basis of current knowledge in virology, how that knowledge is applied when developing treatments such as integrase and protease inhibitors, neuraminidase inhibitors, nucleotide analogs, and others, and considers the rates of resistance of the target viruses to those treatments. There is also some consideration of immunomodulatory treatments and the potential of viral vectors as a means of understanding different immune responses to viruses and the direct effects that viruses can have on …
Investigating The Role Of Epibiotic Bacteria In Defense Against Chytridiomycosis In The Green Frog, Lithobates Clamitans, Sarah Nalven
Investigating The Role Of Epibiotic Bacteria In Defense Against Chytridiomycosis In The Green Frog, Lithobates Clamitans, Sarah Nalven
Honors Theses
Amphibian populations have been declining for several decades, in part due to the emerging fungal skin disease, chytridiomycosis, caused by the chytrid fungus Batrachochytrium dendrobatidis (Bd). Chytridiomycosis has caused extinctions and extirpations in many parts of the world, but its influence varies across species, populations, and individuals. The Green Frog (Lithobates clamitans), which inhabits the eastern half of the United States, seems capable of sustaining Bd infections without experiencing die-offs. It is possible that the Green Frog's epibiotic bacteria are contributing to its defense against Bd as the epibiotic bacteria of several amphibian species are known to play …
Prenatal Choline Supplementation And Mk-801 Toxicity: Protecting Memory And Preventing Neurodegeneration, Chelsea Nickerson
Prenatal Choline Supplementation And Mk-801 Toxicity: Protecting Memory And Preventing Neurodegeneration, Chelsea Nickerson
Honors Theses
Choline is essential to the development and function of the central nervous system. Supplemental choline is neuroprotective against a variety of insults, including neurotoxins like dizocilpine (MK-801). MK-801 is an NMDA receptor antagonist that is frequently used in rodent models of psychological disorders. At low doses, it causes cognitive impairments, and at higher doses it induces motor deficits, anhedonia, and neuronal degeneration. The primary goals of the present study were to investigate whether prenatal choline supplementation protects against the cognitive impairments, motor deficits, and neuropathologies that are precipitated by MK-801 administration in adulthood. Adult male Sprague Dawley rats were fed …
The Development And Morphology Of Zebrafish After Embryonic Ethanol Exposure, Frances Lee
The Development And Morphology Of Zebrafish After Embryonic Ethanol Exposure, Frances Lee
Honors Theses
Maternal consumption of alcohol may subject the fetus to fetal alcohol syndrome or fetal alcohol spectrum disorders (FAS or FASD). FAS/D is a public health problem, and affected children are defined by varying degrees of irreversible mental retardation, physical defects, behavioral issues, and vision problems from prenatal alcohol exposure (Riley et al. 2011). Recent studies on FAS have looked towards animal models, such as zebrafish, Danio rerio, that exhibit homologous physical and behavioral effects of alcohol (Bilotta et al. 2004). I exposed zebrafish embryos to low doses of ethanol (0.5% v/v or 1% v/v) in either chronic (at least 8 …
The Impact Of Tricaine Methanesulfonate, 2-Phenoxyethanol, And Carvone-Methyl Salicylate On The Innate Immune Response Of Zebrafish (Danio Rerio), Charles R. Wulff
The Impact Of Tricaine Methanesulfonate, 2-Phenoxyethanol, And Carvone-Methyl Salicylate On The Innate Immune Response Of Zebrafish (Danio Rerio), Charles R. Wulff
Honors Theses
Anesthesia plays a vital role in the maintenance of aquaculture species, where it is used to minimize stress during complex handling tasks such as transport, assessment, and harvesting. However, anesthetics have been shown to suppress the innate immune response, which could impact immunity and increase risk of infection. Tricaine methanesulfonate (MS-222) and 2-Phenoxyethanol (2-PE) represent two of the most commonly used anesthetics in aquaculture, with R-(+)-carvone, in the form of carvone-methyl salicylate (CMS) has recently been proposed as an alternative anesthetic for food fish. These three anesthetics were used to assess the influence of anesthetics on the immune system of …
The Role Of Taabf1 In Abscisic Acid-Mediated Suppression Of 𝒶-Amylase Gene Expression In Cereal Grains, Lauren J. Harris
The Role Of Taabf1 In Abscisic Acid-Mediated Suppression Of 𝒶-Amylase Gene Expression In Cereal Grains, Lauren J. Harris
Honors Theses
The phytohormones gibberellin (GA) and abscisic acid (ABA) regulate important developments events in germinating seeds. Specifically, GA induces the expression of hyrolase genes, like the α-amylase gene Amy32b, which mobilizes starch reserves to be used by the embryo, and ABA suppresses this induction. Recent advancements identified ABA and GA receptors and key components in the signaling pathways, however, the mechanism of crosstalk between the hormones remains largely unknown. To further elucidate the mechanism of ABA suppression of GA-induced genes, we focused on the transcription factor TaABF1, a member of the ABA response element binding factor family. TaABF1 has been shown …
A Watershed Analysis Of Salmon Lake And Mcgrath Pond: Implications For Water Quality And Land Use Management, Colby Environmental Assessment Team, Colby College, Problems In Environmental Science Course (Biology 493), Colby College
A Watershed Analysis Of Salmon Lake And Mcgrath Pond: Implications For Water Quality And Land Use Management, Colby Environmental Assessment Team, Colby College, Problems In Environmental Science Course (Biology 493), Colby College
Colby College Watershed Study: Salmon Lake and McGrath Pond (2009, 1993)
In the summer and fall of 2009, the Colby Environmental Assessment Team (CEAT) studied the water quality of Salmon Lake and McGrath Pond, located in the Belgrade Lakes Region of Maine. The physical, chemical and biological characteristics of water quality were measured and analyzed to evaluate the current health of these lakes. Water quality data collected during the summer and fall of 2009 were compared with data from previous years to study the historic water quality trends. Land use patterns in the Salmon/McGrath watershed were also examined to investigate their impact on the lake water quality. The water quality trends …
The Effect Of Glutamate On Neurite Outgrowth In Fiddler Crab (Uca Pugilator) X-Organ Cells, Ruth B. Langton
The Effect Of Glutamate On Neurite Outgrowth In Fiddler Crab (Uca Pugilator) X-Organ Cells, Ruth B. Langton
Honors Theses
Glutamate is the primary excitatory neurotransmitter in the mammalian central nervous system. It is of particular interest because of its supposed role in the processes of learning and memory, and also because of its potential toxic effects that have been linked to neurodegenerative diseases, such as Alzheimer’s and Parkinson’s. Although glutamate is necessary for normal cell functioning, high levels of glutamate receptor activation can result in cell death, a phenomenon known as excitotoxicity. It has been suggested that glutamate also plays an important role in the insect and crustacean nervous systems, allowing for the examination of excitotoxicity in these organisms. …
Movement Patterns And Feeding Behavior Of The Limpet Tectura Testudinalis (Müller) Along The Mid-Maine Coast, Joshua Lord
Movement Patterns And Feeding Behavior Of The Limpet Tectura Testudinalis (Müller) Along The Mid-Maine Coast, Joshua Lord
Honors Theses
Tectura testudinalis is a limpet that lives in the mid-intertidal zone along the coast of Maine and grazes on a variety of encrusting algae. A previous study asserted that T. testudinalis preferred to feed and rest on the encrusting alga Clathromorphum circumscriptum and that this species of limpet displayed homing behavior. However, I show that T. testudinalis does not home or return to any specific substrate while resting. Conclusive evidence was found for nocturnal movement. I show that C. circumscriptum was the preferred food source for this limpet, closely followed by Hildenbrandia rubra, another encrusting alga. Field and lab experiments …
A Watershed Analysis Of Pattee Pond: Implications For Water Quality And Land Use Management, Problems In Environmental Science Course (Biology 493), Colby College, Colby Environmental Assessment Team, Colby College
A Watershed Analysis Of Pattee Pond: Implications For Water Quality And Land Use Management, Problems In Environmental Science Course (Biology 493), Colby College, Colby Environmental Assessment Team, Colby College
Colby College Watershed Study: Pattee Pond (2008, 1992)
The Colby Environmental Assessment Team (CEAT) investigated the impact of land use patterns on the water quality of Pattee Pond in Winslow, Maine, during the summer and fall of 2008. Physical, chemical, and biological characteristics of water quality were analyzed to evaluate the current health of the lake. Data collected were compared with previous studies conducted by the Maine Department of Environmental Protection (DEP) and CEAT to examine changes in water quality and land use over time. Trends in Pattee Pond water quality suggest an improvement since the 1970s. However, the lake is still experiencing algal blooms resulting from phosphorus …
Cytotoxicity Of Diepoxybutane And Epichlorohydrin In Relation To Stages Of The Cell Cycle, Megan L. Watts
Cytotoxicity Of Diepoxybutane And Epichlorohydrin In Relation To Stages Of The Cell Cycle, Megan L. Watts
Honors Theses
Work conducted in the Millard Biochemistry Research Laboratory examines the dual nature of molecules as carcinogens and anti-tumor agents through the molecular mechanisms of duplex DNA damage by bifunctional alkylating agents. Diepoxybutane (DEB) and epichlorohydrin (ECH) are polar molecules that form covalent DNA interstrand lesions by cross-linking the N7 position of deoxyguanosine residues. A recent experiment indicated that ECH preferentially targets nuclear DNA over mitochondrial DNA, whereas DEB shows similar rates of lesion formation for both loci. It was concluded that preferential targeting of nuclear DNA results from relatively poor uptake of ECH across the mitochondrial membrane. The objective of …
Microhabitat Selection By The Tortoiseshell Limpet, Tectura Testudinalis (Müller), In Tide Pools On The Mid-Maine Coast, Emily R. Lyczkowski
Microhabitat Selection By The Tortoiseshell Limpet, Tectura Testudinalis (Müller), In Tide Pools On The Mid-Maine Coast, Emily R. Lyczkowski
Honors Theses
Microhabitat selection of the limpet Tectura testudinalis, an important grazer along the rocky Maine coast is examined using both mensurative and manipulative experiments. T. testudinalis substrate selection is essential to its survival in the unpredictable and harsh regime of the intertidal zone. At three sites studied in the Gulf of Maine, T. testudinalis selectively inhabits tidal pools and vertically oriented substrates. Both of these microhabitats reduce the degree of environmental stress (desiccation, extreme temperature, and hypersaline conditions) and predation experienced by individuals. Differences among sites are common, indicating the importance of varying environmental factors in regulating and influencing habitat selection …
Influence Of Juvenile Hormone On Territorial And Aggressive Behavior In The Painted Lady (Vanessa Cardui) And Eastern Black Swallowtail (Papilio Polyxenes), Tara Bergin
Honors Theses
Competition is important in environments with limited resources. Males of many insect species are territorial and will defend resources, such as a food source or egg-laying site, against intruders, or even compete to attract a mate. In insects, evidence suggests that juvenile hormone acts as an aggression mediator, much like testosterone in other animal species. In this study I tested this idea using a group of male Painted Lady butterflies, Vanessa cardui, and Eastern Black Swallowtail butterflies, Papilio polyxenes, that were treated prior to metamorphosis with either a high or low dose of methoprene acid (a juvenile hormone mimic). Male-male …
The Movement Of The Gastrop Littorina Littorea In The Intertidal Zone During The Onset Of Winter, Jon Lefcheck
The Movement Of The Gastrop Littorina Littorea In The Intertidal Zone During The Onset Of Winter, Jon Lefcheck
Undergraduate Research Symposium (UGRS)
The movement of the snail Littorina littoreaon the North Atlantic coast is poorly understood. Most research has concentrated on the vertical distribution of the snail, and suggests that it prefers the low intertidal zone where its food source is most plentiful. In the winter, this distribution is reinforced by a documented seaward migration of snails from the high intertidal zone in response to falling temperatures. From October 14, 2006 to January 22, 2007, I examined the individual movements and recovery of snails in response to the onset of winter. I proposed that falling water and air temperatures drive the majority …
A Pollen Chase Experiment; Examining Varying Levels Of Embryonic Inbreeding Depression, Emily Wilson, Judy Stone
A Pollen Chase Experiment; Examining Varying Levels Of Embryonic Inbreeding Depression, Emily Wilson, Judy Stone
Undergraduate Research Symposium (UGRS)
A pollen chase experiment was performed upon three Costa Rican populations of Witheringia solanacea to examine the breakdown of genetically enforced self incompatibility (SI) and the extent of embryonic inbreeding depression. Self-pollen was applied in the bud, with outcross pollen applied one day later, and outcross pollinations at both intervals as a control. A variety of responses were found among the populations. BOHS readily accepted self pollen and suffered from very low inbreeding depression. Monteverde and Las Cruces both have lower fruit set with self-pollination precedence indicating that bud pollinations can overcome the self-incompatibility response and that embryonic death due …
Measuring Ultrasonic Communication Between Mouse Pups And Adult Mother Mice, Katie Ludwig
Measuring Ultrasonic Communication Between Mouse Pups And Adult Mother Mice, Katie Ludwig
Undergraduate Research Symposium (UGRS)
Measuring ultrasonic communication provides us with a way to study parental influence on animals. In this study I measured the ultrasonic communication between mouse pups and two maternal females, one of which who had given birth to the pups and the other had raised them. I found that there was no significant difference between the amount of noise expressed by pups in response to each the biological mother and foster mother test groups. Mouse pups call to maternal females regardless of genetic relatedness. Communication in mice may be a more complicated model because of their communal nature.
Differential Habituation Of Male Betta Splendens To Qualitatively Different Stimuli, Lauren Baard
Differential Habituation Of Male Betta Splendens To Qualitatively Different Stimuli, Lauren Baard
Undergraduate Research Symposium (UGRS)
Habituation is a learning mechanism that functions to decrease the amount of energy and attention focused on a certain stimuli. Male Siamese Fighting Fish, Betta splendens, are territorial animals that defend their territories using a number of aggressive displays. Male Bettas have previously shown the ability to habituate to the presence of a conspecific male when visually exposed to each other. Due to the costly nature of many of the male Betta’s displays, I hypothesized that male Bettas should differentially habituate to qualitatively different stimuli. I presented each of three groups of male Betta splendens with a different stimulus, each …
The Isolation And Characterization Of Multiply Antibiotic Resistant Strains Of Fish Pathogenic Flavobacterium Species, Sarah E. Clark, Jaehee Yun, Justin Guay
The Isolation And Characterization Of Multiply Antibiotic Resistant Strains Of Fish Pathogenic Flavobacterium Species, Sarah E. Clark, Jaehee Yun, Justin Guay
Undergraduate Research Symposium (UGRS)
Since the development of the first antibiotics in the 1940’s, there has been widespread overuse in both clinical and agricultural applications. Antibiotic resistance has become a significant problem as a result of subsequent dissemination of antibiotics into the environment, and multiply-resistant strains of bacteria are now a major pathogenic threat. In this study eight separate strains of Flavobacterium responsible for recent disease outbreaks in fish hatcheries throughout Maine were collected and analyzed. All eight strains were found to be resistant to high levels of a number of different antibiotics, including those used for aquaculture as well as human chemotherapeutic applications. …
The Impact Of Land Use Patterns And Watershed Characteristics On China Lake, Kennebec County, Maine, Rachel N. Carr, Caroline A. Polgar, Jakob B. Moe, F. Russell Cole, David H. Firmage, Kirsten L. Ness
The Impact Of Land Use Patterns And Watershed Characteristics On China Lake, Kennebec County, Maine, Rachel N. Carr, Caroline A. Polgar, Jakob B. Moe, F. Russell Cole, David H. Firmage, Kirsten L. Ness
Undergraduate Research Symposium (UGRS)
China Lake is located in Kennebec County, Maine. Since 1983 the lake has suffered from yearly algal blooms as a result of the addition of excess nutrients. The nutrient load was amplified by erosion within the watershed. Erosion varies widely depending on a number of factors, including the slope of the land, the type of soil, and the way the land is being used. Certain land use types have a high potential to add nutrients to the environment, while others may help absorb excess nutrients and prevent erosion and runoff into the lake. A comprehensive examination of the China Lake …
Climate Change And Its Effects On Polar Bears, Alex C. Jospe, Bethany C. Peck, Emily Sinnott
Climate Change And Its Effects On Polar Bears, Alex C. Jospe, Bethany C. Peck, Emily Sinnott
Undergraduate Research Symposium (UGRS)
Polar bears are key indicators of the effects of climate change on the arctic ecosystem, because their existence is directly related to the sea ice habitat, where they hunt. As the Arctic continues to warm, their habitat will be reduced further and local extinction is likely to occur, especially in southern populations.