Life Sciences Commons^™

Cross-Polarized Magic-Angle Spinning 13c Nuclear Magnetic Resonance Spectroscopic Characterization Of Soil Organic Matter Relative To Culturable Bacterial Species Composition And Sustained Biological Control Of Pythium Root Rot, Michael J. Boehm, Tianyun Wu, Alex G. Stone, Bart Kraakman, Donna A. Iannotti, G. Edwin Wilson, Laurence V. Madden, Harry A.J. Hoitink

Department of Plant Pathology: Faculty Publications

We report the use of a model system that examines the dynamics of biological energy availability in organic matter in a sphagnum peat potting mix critical to sustenance of microorganism-mediated biological control of pythium root rot, a soilborne plant disease caused by Pythium ultimum. The concentration of readily degradable carbohydrate in the peat, mostly present as cellulose, was characterized by cross-polarized magic-angle spinning 13C nuclear magnetic resonance spectroscopy. A decrease in the carbohydrate concentration in the mix was observed during the initial 10 weeks after potting as the rate of hydrolysis of fluorescein diacetate declined below a critical threshold level …

Promoters From Chlorellavirus Genes Providing Expression Of Genes In Prokaryotic And Eukaryotic Hosts, Amitava Mitra, James L. Van Etten

Department of Plant Pathology: Faculty Publications

The invention is directed to novel promoters or mutants thereof from Chlorella virus DNA methyltransferase genes. A Chlorella virus gene promoter is operably linked to a first and/or second DNA sequence encoding a gene that is different from the Chlorella virus gene to form an expression cassette. An expression cassette can be introduced into prokaryotic and/or eukaryotic cells and can provide for a high level of expression of the gene encoded by the first and/or second DNA sequence. The invention also provides a method for screening other Chlorella virus genes for promoters that can function to express a heterologous gene …

Taking Root, W. John Hayden

Biology Faculty Publications

The brief description of mangrove reproduction in John N. Cole's "Off Key, Out of Reach" [A Sense of Place, July-August] contains an error.

Biotin Carboxyl Carrier Protein And Carboxyltransferase Subunits Of The Multi-Subunit Form Of Acetyl-Coa Carboxylase From Brassica Napus: Cloning And Analysis Of Expression During Oilseed Rape Embryogenesis, Kieran M. Elborough, Robert Winz, Ranjit K. Deka, Jennifer E. Markham, Andrew J. White, Stephen Rawsthorne, Antoni R. Slabas

Department of Biochemistry: Faculty Publications

In the oilseed rape Brassica napus there are two forms of acetyl- CoA carboxylase (ACCase). As in other dicotyledonous plants there is a type I ACCase, the single polypeptide 220 kDa form, and a type II multi-subunit complex analogous to that of Escherichia coli and Anabaena. This paper describes the cloning and characterization of a plant biotin carboxyl carrier protein (BCCP) from the type II ACCase complex that shows 61% identity/79% similarity with Anabaena BCCP at the amino acid level. Six classes of nuclear encoded oilseed rape BCCP cDNA were cloned, two of which contained the entire coding region. …

The Complete Nucleotide Sequence And Genome Organization Of The M Rna Segment Of Peanut Bud Necrosis Tospovirus And Comparison With Other Tospoviruses, Satyanarayana Tatineni, S. E. Mitchell, D. V. R. Reddy, S. Kresovich, R. Jarret, R. A. Naidu, S. Gowda, J. W. Demski

Department of Plant Pathology: Faculty Publications

The M RNA of peanut bud necrosis virus (PBNV; synonym groundnut bud necrosis virus) is 4801 nucleotides in length. It comprised two ORFs in an ambisense organization and terminal inverted repeats. The 3' large ORF (3363 nucleotides in the virus-complementary strand) encoded a protein with a predicted size of 127.2 kDa which was identified as the glycoprotein precursor (GP) of the G1 and G2 glycoproteins. A comparison of the deduced amino acid sequence of GP revealed 37 % identity and 58-59% similarity with that of tomato spotted wilt virus (TSWV, serogroup I) and impatiens necrotic spot virus (INSV, serogroup III), …

Peanut Bud Necrosis Virus: Purification Of Nucleocapsids And Sequence Homology Of Nucleocapsid Protein And Glycoprotein Precursor With Other Tospoviruses, Satyanarayana Tatineni, S. E. Mitchell, D. V. R. Reddy, S. Brown, S. Kresovich, R. Jarret, S. Gowda, R. A. Naidu, J. W. Demski

Department of Plant Pathology: Faculty Publications

A procedure for the purification of peanut bud necrosis virus (PBNV) nucleocapsids was developed. Virus particles were treated with nonionic detergent to disrupt the envelope membrane and free nucleocapsids were separated. into three lightscattering zones after sucrose gradient centrifogation. Nucleocapsids from the top zone contained S RNA and traces ofM RNA; whereas, nucleoplasids from the middle zone contained M RNA with detectable levels of S RNA and those from the bottom zone contained L RNA with traces of M and S RNAs. Clones from a cDNA library made from the purified PBNV Sand M RNAs were characterized and sequenced. Comparison …

Diagnosis And Resistance Breeding Of Peanut Bud Necrosis Virus, D. V. R. Reddy, Satyanarayana Tatineni, S. L. Dwivedi, A. S. Ratna, A. A. M. Buiel, G. V. Ranga Rao, S. N. Nigam, R. A. Naidu, H. T. Hsu, J. W. Demski

Department of Plant Pathology: Faculty Publications

The occu!fence of peanut bud necrosis (PBN) disease in India was first reported in 1968. The high incidence ofPBN disease during the 1960s coincided with largescale imports of the peanut cultivars Asiria Mwitundae and Spanish Improved, both of which are highly susceptible to PBN. Since then, a number of reports have been published in India describing bud necrosis under at least seven different names (Reddy 1988). Crop losses due to PBN have been estimated at USD89 million per year in India during 1976-1986. The disease is also currently recognized as economically important in Nepal (Sharma 1996), in Sri Lanka, and …

Molecular Diagnostics Of Three Diabrotica (Coleoptera: Chrysomelidae) Pest Species, Allen L. Szalanski, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

A 257 bp region of the mitochondrial ND4 gene was analyzed for genetic variation in three species of corn rootworm, southern corn rootworm (Diabrotica undecim punctata howardi Barber, SCR), northern corn rootworm (D. barberi Smith and Lawrence, NCR), and western corn rootworm (D. virgifera virgifera LeConte, WCR). Nucleotide sequencing revealed 26 polymorphic sites. Genetic distances averaged 8% for all pair-wise comparisons among the three species. Restriction maps were constructed from sequence data and compared to potential species specific restriction sites. Polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) revealed three restriction enzymes (Alu I, Apo I …

Movement Of Crop Transgenes Into Wild Plants, Kathleen H. Keeler, Charles E. Turner, Margaret R. Bolick

School of Biological Sciences: Faculty Publications

Despite the great potential and increasing importance of other weed control options (Turner et al. 1992) and unwanted environmental side effects of some herbicides, herbicides constitute a very important means of weed control. The escape of herbicide resistance genes to wild, weedy plants could cause more severe weed problems, and presents a very real threat to the efficacy of herbicides as a weed control option. Therefore, management strategies that prevent, or reduce the likelihood and frequency of HRG escape through containment methods are advisable, as are mitigation plans in the event of HRG escape to wild plants.

A Revision Of Discocarpus (Euphorbiaceae), Sheila M. Hayden, W. John Hayden

Biology Faculty Publications

As revised here, Discocarpus is interpreted to consist of three neotropical species: D. essequeboensis Klotzsch, D. gentryi S. M. Hayden, which is described and named herein as new to science, and D. spruceanus Müll. Arg. One previously accepted name, D. brasiliensis Klotzsch ex Müll. Arg., is reduced to synonymy of D. essequeboensis. Lecto-types are proposed for the two species previously described. One species is newly excluded from Discocarpus, as are three others, following previous literature. Foliar anatomy is described with a focus on epidermal sclereids, which are shown to occur on both epidermides. Evidence presented supports close relationships …

Evapotranspiration From A Saltcedar-Dominated Desert Floodplain: A Scaling Approach, S. D. Smith, A. M. Sala, Dale A. Devitt

Life Sciences Faculty Research

The purpose of this study was to investigate evapotranspiration (ET) from a variety of scales (leaf to landscape) in saltcedar-dominated floodplain vegetation along the lower Virgin River of southern Nevada. Leaf-level gas exchange indicated that saltcedar exhibits similar stomatal conductance as the sympatric phreatophytes arrowweed, mesquite, and willow. However, sap flow in saltcedar was higher per unit sapwood area than the other species, suggesting that it maintains higher leaf area per unit sapwood area. At the stand level, saltcedar ET was found to exceed potential ET early in the summer when soils were moist and the water table was near …

Breeding Sorghum And Pearl Millet For Forage And Fuel, Jeffrey F. Pedersen

Department of Agronomy and Horticulture: Faculty Publications

Sorghum [Sorghum bicolor (L.) Moench] and pearl millet [Pennisetum glaucum (L.) R. Br.] are unique species in their ability to be used in many forage llivestock system roles. Such flexibility has made prioritizing breeding objectives difficult and has even contributed to contradictory opinions on appropriate forage breeding objectives. Few breeding projects identified in the USDA-ARS, USDA-CREES, or at ICRISAT had forage sorghum or forage pearl millet as their sole research assignment. In the United States, it can be argued that breeding resources committed to forage sorghum improvement are probably declining. A new forage sorghum and forage pearl millet …

Media Effects On Phenotype Of Callus Cultures Initiated From Photoperiod-Insensitive, Elite Inbred Sorghum Lines, H. F. Kaeppler, Jeffrey F. Pedersen

Department of Agronomy and Horticulture: Faculty Publications

Sorghum (Sorghum bicolor L. Moench) is a crop of worldwide agronomic importance. Routine production of high quality (friable, embryogenic, fast growing) callus cultures is fundamental to tissue culture based genetic study and improvement of sorghum. Genotype by culture medium interactions for sorghum callus growth and morphology have been previously reported. The objective of this study was to identify tissue culture media that would support high quality callus growth across photoperiod insensitive, relatively elite genotypes. Explants from immature inflorescences of 11 sorghum genotypes were cultured on 6 tissue culture media of differing composition. After 3 and 5 months in culture, calli …

Annual Forages: New Approaches For C-4 Forages, Jeffrey F. Pedersen

Department of Agronomy and Horticulture: Faculty Publications

The current agricultural paradigm in the U.S. is heavily biased towards the production and marketing of crops as commodities. This paradigm is kept in place by grain handling and marketing infrastructure, as well as government farm programs, designed for crops as commodities. Sorghum (Sorghum bicolor L. Moench) and maize (Zea mays L.) grown for grain certainly fit into this current paradigm.

A new approach to agricultural production and marketing, identity preserved products, is gaining in importance. This is made possible through new technologies and markets demanding products designed specifically for their needs. Examples of investment in identity preserved …

Germplasm And Cultivar Development, M. D. Casler, Jeffrey F. Pedersen, G. C. Eizenga, S. D. Stratton

Department of Agronomy and Horticulture: Faculty Publications

Cool-season forage grasses have evolved, and continue to evolve, in natural ecosystems subject to environmental factors both in the presence and absence of human influences. The literature often lacks facts describing the evolution and domestication of forage grasses. Furthermore, the literature on this subject mainly deals with evolution of species in the broad scope, i.e., on a scale of hundreds of thousands or millions or years. Thus, some of our conclusions are necessarily speculative and are highly subject to the nature of the research that has been reported. We describe the forces of selection that act upon cool-season forage grasses …

Application Of The Single Kernel Wheat Characterization Technology To Sorghum Grain, Jeffrey F. Pedersen, C. R. Martin, F. C. Felker, J. L. Steele

Department of Agronomy and Horticulture: Faculty Publications

A single kernel wheat characterization system (SKWCS) was recently developed by the USDA, ARS Grain Marketing Research Laboratory and is currently being marketed by Perten Instruments North America, Inc. This device has been shown to accurately measure individual seed hardness, moisture, and size of wheat. The objective of this study was to determine if the SKWCS technology could be applied to the measurement of sorghum grain. Grains from 64 sorghum plots grown at Mead, NE in 1992 were characterized using a prototype SKWCS at the USDA, ARS Grain Marketing Research Laboratory. Problems encountered were primarily associated with the single kernel …

Toxin Producing Phytoplankton In Chesapeake Bay, Harold G. Marshall

Biological Sciences Faculty Publications

Three diatoms and nine dinoflagellates, known to be associated with toxin production, have been identified within Chesapeake Bay. Over the past several decades this number has increased to its present level so that they now represent approximately 1.7% the total number of phytoplankton species reported for the Bay.