Life Sciences Commons^™

Novel Microbiological Medium Developed For The Isolation Of Bacteria Associated With Estuarine Anemones, Parker K. Lund, Catalina Cuellar-Gempeler

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Out of the nearly one trillion species of microbiota estimated to inhabit Earth only ten thousand have been cultured in the laboratory. Culturing continues to play a vital role in determining the physiology and ecologic function of individual bacteria in microbial communities and for microbes associated with host organisms one of the major challenges is developing microbiological media that mimics the bacteria’s natural environment enough to promote growth. Here, we target bacteria associated with the estuary anemones Diadumene lineata and Metridium senile by developing a novel medium that uses anemone tissue as the sole source of nutrients. We further measured …

Ecological And Educational Impacts Of A Living Shoreline On St. Simons Island, Georgia, Usa, C. Tate Holbrook, Cameron Atkinson, Jordan Fountain, Stephanie Knox, Jan Mackinnon

Georgia Journal of Science

Living shorelines encompass a range of nature-based alternatives to traditional coastal armoring structures. In addition to shoreline stabilization and protection, living shorelines are intended to meet conservation goals such as restoring habitat, delivering ecosystem services, and promoting ecological resilience to climate change. While early results have been promising, further monitoring is needed to better understand and evaluate the performance of living shorelines across a range of designs and environmental contexts, thereby informing coastal management. Nature-based shoreline protection is relatively new in Georgia, USA, where in 2015 the state’s fourth living shoreline was constructed of oyster shell and native plants on …

Application Of The Analytic Hierarchy Process And Geographic Information System In Selecting Sites For A Seafood Market Study, Shielameh Peralta-Milan, Osamu Baba, Severino Iii Salmo

The Philippine Agricultural Scientist

Study site selection is essential for the success of many fisheries-related programs. A thorough site selection could provide transparency in the decision-making process and optimize resources. In this research, the analytic hierarchy process (AHP) approach was used to select sites for a market study of reef-associated seafood in Alaminos City, Northwestern Philippines. Out of the 10 coastal barangays, four (Lucap, Sabangan, Telbang, and Victoria) were initially chosen, and the difference between these sites and the priority sites generated from AHP was examined. Five decision criteria and 10 alternatives (coastal barangays) were analyzed to calculate priority weights using pairwise comparisons. The …

Descriptions Of The First Zoeas Of Three Grapid Crabs ( Crustacea: Decapoda: Grapsidae) From Hadhramout Coast-Gulf Of Aden, Ahmed Edah Al Haj

Hadhramout University Journal of Natural & Applied Sciences

This study aimed to describe the first zoeal stage of three species of the grapsid (Metopograpsus thu-khar, Geograpsus crinipes, Grapsus tenuicrastatus) for the first time in the Gulf of Aden from three stations offshore in the coast of Al Shihr. Samples were collected using a 352 µm plankton net for three months. The larval stage was dissected in detail and the appendages were drawn using a Lucida graphic camera. The species G. tenuicrastatus was distinguished from the known Grapsus species in that the antenna contains five setae ranged in the (3 + 2) system, while in the other species ranged …

A Computational Profile Of Invasive Lionfish In Belize: A New Insight On A Destructive Species, Joshua E. Balan

The Journal of Purdue Undergraduate Research

Since their discovery in the region in 2009, invasive Indonesian-native lionfish have been taking over the Belize Barrier Reef. As a result, populations of local species have dwindled as they are either eaten or outcompeted by the invaders. This has led to devastating losses ecologically and economically; massive industries in the local nations, such as fisheries and tourism, have suffered greatly. Attempting to combat this, local organizations, from nonprofits to ecotourism companies, have been manually spear-hunting them on scuba dives to cull the population. One such company, Reef Conservation Institute (ReefCI), operating out of Tom Owens Caye outside of Placencia, …

Exploring Market Segmentation For Autonomous Ferries, Ashari Fitra Rachmannullah, Taih Cherng Lirn, Kuo Chung Shang

Journal of Marine Science and Technology

This study aims to investigate the determinants that underlie psychographic segmentation in the domain of autonomous ferries (AFs) by using the theory of planned behaviour (TPB) as a guiding theoretical construct. The paper focuses on Indonesian individuals who had previously utilised conventional ferry services. TPB was applied as a catalyst to identify possible market segmentation among potential AF passengers. In this study, cluster analysis is used to differentiate passengers by their perception of using AFs. The results identified three market segments through cluster analysis based on passengers’ perceptions of using AFs: Resource-Limited, Resource-Capable, and Value-Optimistic. Among these segments, the Resource-Capable …

Fretting Corrosion Wear Of Titanium-Based Alloy (Ti-6al-4v) In 0.9 Wt.% Nacl Solution, Chen-En Lu, Wen-Ken Li, Hung-Hua Sheu, Jeou-Long Lee, Hung-Bin Lee

Journal of Marine Science and Technology

In this study, a high precision fretting tribo-corrosion tester used to analyze the wear and corrosion behavior of Ti alloys in a fretting motion condition. The tester, operated in a ball-on-plate mode, was employed in the fretting corrosion study of metallic bio-materials (Ti and Ti-6Al-4V) under different loads (0 and 10 N), electrolytes (0.9 wt% NaCl and SBF) and fixed displacement frequency (1 Hz). Using profilometer, optical microscope in the experimental analysis and three-body mechanism in the theoretical analysis, the fretting corrosion performances of these bio-medical metals, such as velocity accommodation characteristics, friction, wear, and scratch profile were examined in …

A New-Type Deep Learning Model Based On Shapley Regulation For Containerized Freight Index Prediction, Yen-Chang Shih, Ming-Shue Lin, Taih-Cherng Lirn, Jih-Gau Juang

Journal of Marine Science and Technology

In this study, we have crafted an innovative methodology that represents a groundbreaking synthesis of deep learning techniques with cooperative game theory. In this study, we use the accuracy of data prediction by different LSTM models as a measurement index and assign different LSTM models corresponding weights through the Shapley value calculation method to construct a more accurate predictive analysis model. We use this improved Shapley regulation model to calibrate a long short-term memory (LSTM) neural network by using historical freight data to predict the China Container Freight Index (CCFI), the leading export container freight index commonly used in China. …

Applicability Of Reducing Valve Timing Overlap For Diesel Engines Under High Exhaust Back Pressure, Chien-Cheng Chen, Yuan-Liang Jeng, Shun-Chang Yen

Journal of Marine Science and Technology

The exhaust back pressure of diesel engines becomes increasing higher nowadays. As an example, the De-NOx system and DE-SOx system necessitated by the increasingly stringent emission standards, would result in increased exhaust back pressure for those diesel engines adopting such systems. Some ships adopt underwater exhaust system to save space on the working deck and to reduce noise and air pollution, while the hydrostatic pressure under water level has made the exhaust back pressure of diesel engines getting much higher. Under high exhaust back pressure, to keep discharging exhaust unhindered and operating smoothly for diesel engine, it often results in …

Adaptive Prediction Horizon Energy-Saving Collision-Free Mpc Of Ships Based On Ship-Shore Cooperation, Han Xue, Enjie Yang

Journal of Marine Science and Technology

ABSTRACT:In order to perform the close association between ship maneuvering control and energy consumption through the control strategy, this paper designs an adaptive prediction horizon based energy-saving robust nonlinear model predictive control (APHERNMPC) for underactuated ships to deal with the actual control and state constraints during berthing based on ship-shore cooperation. An improved Emperor Penguin Optimizer (EPO) method is proposed for collision avoidance decision. To solve the problems of falling into local optimum and reducing the convergence speed, the traditional EPO is improved based on Sobol sequence in order to enhance the diversity and ergodicity of the population. The multi-ship …

Elimination Of Noise In A Ship Cabin Using Multi-Layered Acoustic Boards: An Apso And Sa Approach, Min-Chie Chiu, Ho-Chih Cheng

Journal of Marine Science and Technology

A high level of noise, combined with pure tones, is often encountered in ship's cabins, leading to severe psychological and physiological issues for the crew. To address this problem, an indoor noise abatement solution becomes necessary that utilizes efficient acoustic boards integrated with resonators, positioned along the inner walls of the cabin. However, the thickness of the acoustic boards must be strictly limited due to maintenance and operational considerations. This limitation results in insufficient sound absorption capabilities and a restricted range of tuned frequencies, as the resonating frequency of a standard Helmholtz resonator is closely tied to its cavity. A …

Seasonal Abundance Of The Nudibranch Dondice Jupiteriensis On The Colonial Hydroid Eudendrium Carneum, Erika Molina, Daniela Gutierrez-Andrade, Samantha Schlegel, Julia Piper, Louis J. Ambrosio, Michael L. Middlebrooks

Gulf and Caribbean Research

Benthic colonial hydroids often serve as a host to a large variety of invertebrate taxa. The colonial hydroid Eudendrium carneum Clarke, 1882 is host to a variety of epifauna, including the recently described nudibranch Dondice jupiteriensis García—Méndez & Valdés, 2022. Like many species of heterobranch sea slugs, little is known about the natural history and population biology of D. jupiteriensis. Here we describe a year—long study recording the population density and size structure of D. jupiteriensis on E. carneum colonies in Tampa Bay, FL USA. We found that the D. jupiteriensis population persists year—round but is the densest during …

A Preliminary Study On Floating Flexible Otec Cold Water Pipe, Nai Kuang Liang, Hai Kuan Peng

Journal of Marine Science and Technology

Ocean Thermal Energy Conversion (OTEC) requires a large amount of cold seawater. The traditional rigid pipe, semi-rigidly fixed onto the ship bottom is not easy to install and disassemble, so the Floating Flexible Cold Water Pipe (FFCWP) flexibly connected to the ship is proposed. A small FFCWP was designed, fabricated, and successfully installed and recovered in the sea. The flexible pipe adopts commercially available fire ventilation snake pipe. The pipe wall material strength must be improved in the future. Assuming that the drag coefficient Cd value is 1.5, a numerical calculation is employed to simulate the FFCWP attitude from the …

Machine Learning With Multi-Source Data To Predict And Explain Marine Pilot Occupational Accidents, Gokhan Camliyurt, Youngsoo Park, Daewon Kim, Won Sik Kang, Sangwon Park

Journal of Marine Science and Technology

Marine pilot occupational accidents during transfer to/from ships are the primary concern of the International Marine Pilots’ Association (IMPA) and industry professionals. There are multiple transfer methods for marine pilots, with the most common being the pilot boat. To reach the mother ship bridge, the following stages must be safely completed: car transfer, walking on the pier, pier to pilot boat, pilot transfer by boat, cutter to pilot ladder, mother ship freeboard climbing, and ship deck to the bridge. Each stage has its own risk. Previous accident records and expert opinions are commonly used to conduct a risk analysis and …

Evaluation Of Operational Performance Of Wusongkou Cruise Port Through Network Data Envelopment Analysis, Qian-Feng Wang, Guo-Ya Gan, Xin-Liang Ye, Hsuan-Shih Lee

Journal of Marine Science and Technology

As major hubs for cruise berthing and passenger transfers, cruise ports in China were developing rapidly in the years before the COVID-19 pandemic because of an ever-growing regional market. Wusongkou Cruise Port is the most important port for cruise ships in China, and this study evaluated the operational performance of this port during 2011–2020. To this end, two-stage network data envelopment analysis was conducted to evaluate the port’s operation performance; subsequently, the change trajectory of the port’s operational efficiency during 2011–2020 was determined, and the potential reasons for the identified changes are discussed. Finally, suggestions for improving the operational performance …

Analyzing The Shark Paleoecology Of Coastal Georgia From The Miocene And Pliocene Epochs, Joshua Lee Clark, Benjamin Angalet

Georgia Journal of Science

The field of shark paleoecology often yields indecisive conclusions based on the limited fossilization of their anatomical structures, with the exception of their teeth. The majority of the Atlantic coast has been studied regarding the presence of certain prehistoric shark species from the Miocene, Pliocene, and Pleistocene epochs. However, information pertaining to the Georgia coast and understanding its potential community structure is relatively understudied. This study was conducted in which thousands of fossil shark specimens and subsequent marine fauna were collected from dredge spoils created by the US Army Corps of Engineers (USACE): Savannah District. A total of 5,127 fossil …

Protective Responses Of The Intestinal Epithelial Cell Line Ht-29 Cells Exposed To Dephosphorylated Salmonella Flagellin [Research Note], Heyeon Baik, Jaiesoon Cho

The Philippine Agricultural Scientist

This study aimed to describe the effects of Salmonella Typhimurium flagellin (SFL) dephosphorylated by sweet potato purple acid phosphatase (PAP) on the protective responses of the intestinal epithelial cell line HT-29 cells. The enzyme was reported to display a broad substrate specificity for various organic phosphorylated conjugates and phosphoproteins. Dephosphorylation of SFL by sweet potato PAP decreased to 35% in the presence of 0.05 mM vanadate as compared with the negative control (p < 0.05). Intact SFL and the SFL treated with sweet potato PAP did not remarkably induce the activation of caspase-3 in HT-29 cells at all the tested levels of the substrate. Intact SFL maximally induced the release of IL (interleukin)-8 in HT-29 cells at 1000 ng/mL (p < 0.05). However, the SFL treated with the enzyme inhibited the release of IL-8 at over 100 ng/mL of the substrate as compared with intact SFL, resulting in an approximately 8-fold decrease even at 1000 ng/mL (p < 0.05). The SFL treated with the enzyme decreased the activation of the total ERK1/2 in the cells to 1.9 and 1.7–fold at 10 and 1000 ng/mL of the substrate, respectively, as compared with intact SFL (p < 0.05). In conclusion, sweet potato PAP could be a promising tool for controlling excessive inflammation during Salmonella infection in animal husbandry, and the enzyme could be a safe alternative that can overcome the drawbacks of chemotherapy.

Driving The Workhorse: Maine’S Reliance On The Nearshore Environment, Angela Brewer

Maine Policy Review

The changing character of Maine’s coastal ecosystems has accelerated in full view of the users most reliant on nearshore habitats and the species they support. Adaptation and diversification facilitate continued harvest of Maine’s iconic ocean bounty, which supports the coastal economy despite compounding stresses from upland development, warmer and more acidic waters, and invasive species. Use intensification in the nearshore environment calls for coordinated discussions to nurture and innovate within and across habitats to preserve their longevity and sustain the people that depend on them. Recent legislative support for eelgrass and salt marsh mapping, and estuarine and marine water quality …

Why Is The Depletion Of Our Important Fish Stocks So Persistent?, James A. Wilson

Maine Policy Review

In the 1980s and 1990s, two events changed the fundamental structure of Maine's coastal ecology: inshore herring and then nearshore groundfish stocks were overfished and disappeared. Surprisingly, even without fishing, there has been no recovery. Standard fisheries management assumes that the recovery of any locally overfished place should be quick – fish from other places will 'fill in.'

In contrast, recent scientific work on social learning among animals suggests that fish have communication and learning abilities comparable to other vertebrates. Learning allows groups of fish to adapt to much more local places than possible if adaptation depended on genetics alone. …

What Gives Me Hope, Heather M. Leslie

Maine Policy Review

The commentary focuses on the author's experiences over the last several years in Maine where she has conducted research, mentored students, and collaboratde with diverse community partners on a number of projects focused on shellfish fisheries co-management and other community-led resilience projects in coastal Maine.

Coastal Water Temperature Guide, Andrew Allegra

Benefits of Ocean Observing Catalog (BOOC)

● Near real-time temperatures are from NOAA's National Ocean Service (NOS) tidal stations and Physical Oceanographic Real-Time System (PORTS®).

● Recent and near real-time water temperatures are also from NOAA's National Data Buoy Center (NDBC) moored buoys.

● Daily Averaged Sea Surface Temperature (SST) is from NOAA NCEI’s 1/4° Daily Optimum Interpolation Sea Surface Temperature (OISST) data set. It is a blended SST file of buoy, ship, Argo, and satellite observations.

The Olympic Coast As A Sentinel: An Integrated Social-Ecological Regional Vulnerability Assessment To Ocean Acidification, Courtney Cochran

Benefits of Ocean Observing Catalog (BOOC)

Timestamp: 44862.4626207986 Email Address: courtney.cochran@noaa.gov Name: Courtney Cochran Affiliation: NOAA Affiliate (UCAR Contractor) Program Office/Division: Ocean Acidification Program Position Title: Program Specialist III Title of use case: The Olympic Coast as a Sentinel: An Integrated Social-Ecological Regional Vulnerability Assessment to Ocean Acidification Authors or Creators: Newton, J. ; Poe, M. ; Alin, S. ; Chadsey, M. ; Feely, R. ; Fradkin, S. ; Hagen, J. ; Ledford, J. ; Koehlinger, J. A. ; Schumacher, J. ; Siedlecki, S. ; Svec, R. ; Waddell, J. ; Watkinson-Schutten, M Affiliations of Authors or Creators: University of Washington Applied Physics Lab and the …

Marine Heat Waves, Andrew Allegra

Benefits of Ocean Observing Catalog (BOOC)

Marine heatwave data sets are calculated by NOAA’s National Centers for Environmental Information using Optimum Interpolation Sea Surface Temperature (OISST) data. The NOAA 1/4° OISST is a long-term Climate Data Record that incorporates observations from different platforms (satellites, ships, buoys and Argo floats) into a regular global grid. The in situ component of this input is critical.

Geo Blueplanet - Noaa Coastwatch - Esri Coastal Eutrophication Index In Support Of Sustainable Development Goal 14.1.1, Merrie Beth Neely

Benefits of Ocean Observing Catalog (BOOC)

Timestamp: 44819.6683347106 Email Address: merrie.neely@noaa.gov Name: Merrie Beth Neely Affiliation: Global Science and Technology Program Office/Division: NESDIS/STAR/SOCD/NOAA CoastWatch Position Title: research scientist (contractor) Title of use case: GEO BluePlanet - NOAA CoastWatch - ESRI Coastal Eutrophication Index in support of Sustainable Development Goal 14.1.1 Authors or Creators: Neely, M and Lance, V Affiliations of Authors or Creators: GST, Inc. (Neely) and NOAA Federal (Lance) Contributors: Smail, E. and Ramachandran, S Affiliation of Contributors: GEO BluePlanet (Smail) and RIVA (Ramachandran) Description: UN Environment requested assistance developing two satellite-based ocean color indicators of coastal eutrophication. This global product covers the EEZs for …

Critical Use Of Noaa Coastwatch Great Lakes Node Remote Sensing Of Sea Ice For Uscg Mission Planning, Merrie Beth Neely

Benefits of Ocean Observing Catalog (BOOC)

Timestamp: 44823.3273319444 Email Address: merrie.neely@noaa.gov Name: Merrie Beth Neely Affiliation: Global Science and Technology, Inc. Program Office/Division: NESDIS/STAR/SOCD/NOAA CoastWatch Position Title: Research Scientist (contractor) Title of use case: Critical Use of NOAA CoastWatch Great Lakes Node Remote Sensing of Sea Ice for USCG mission planning Authors or Creators: Neely, M.B. and Lance, V. Affiliations of Authors or Creators: GST, Inc. (Neely) and NOAA Federal (Lance) Contributors: VanderWoude, A and Liu, S. Affiliation of Contributors: NOAA Federal (VanderWoude), CIGLR - University of Michigan (Liu) Description: USCG uses NOAA CoastWatch-supplied true-color imagery, the RADARSAT ice classification, and ice extent imagery when selecting …

Booc Api Test, Anthony Castellletto

Benefits of Ocean Observing Catalog (BOOC)

This is just a test to see if I can read data from a published case through the Digital Commons API. Just ignore this case.

Tony Castelletto

Global Forecasts Of Marine Heatwaves, Michael Jacox

Benefits of Ocean Observing Catalog (BOOC)

Timestamp: 44862.4486656366 Email Address: michael.jacox@noaa.gov Name: Michael Jacox Affiliation: NOAA Southwest Fisheries Science Center and NOAA Physical Sciences Laboratory Program Office/Division: Position Title: Research oceanographer Title of use case: Global forecasts of marine heatwaves Authors or Creators: Jacox, M., Alexander, M., Amaya, D., Becker, B., Bograd, S., Brodie, S., Hazen, E., Pozo Buil, M., Tommasi, D., Hsu, C.-W., Smith, C. Affiliations of Authors or Creators: NOAA Physical Sciences Laboratory; NOAA Southwest Fisheries Science Center; University of Colorado; University of Miami; University of California Santa Cruz Contributors: Affiliation of Contributors: Description: Researchers used climate forecast systems to develop global marine heatwave …

Understanding Comprehensive Flood Risk With Noaa Data, Kate Quigley

Benefits of Ocean Observing Catalog (BOOC)

Timestamp: 44806.3799229514 Email Address: kate.quigley@noaa.gov Name: Kate Quigley Affiliation: NOAA Program Office/Division: NOS OCM Position Title: Economist Title of use case: Understanding Comprehensive Flood Risk with NOAA Data Authors or Creators: NOAA OCM Digital Coast website Affiliations of Authors or Creators: NOAA OCM Contributors: Doug Marcy Affiliation of Contributors: NOAA OCM Description: The Beyond Floods app features a flood outlook score and detailed reports for each individual property. This score is an abstraction of more than 25 factors related to real estate, social perception, flood insurance, flood mitigation and losses, infrastructure, and geomorphology. Syndeste used data from NOAA’s digital elevation …

Smart Sounding Table Using Adaptive Neuro-Fuzzy Inference System, Osman Ünal, Nuri Akkaş

Journal of Marine Science and Technology

Marine engineers measure the liquid level (sounding depth) to calculate the volumetric content of a ship's tank. The sounding depth is determined using an ullage pipe located at specific points on the tanks. To estimate the accurate volume of liquid, considering the ship's trim and heel conditions, engineers use a tank table (sounding table) consisting of hundreds of pages. However, this method is time-consuming and lacks intermediate values for sounding depth, trim, and heel. Ship designers recommend to use linear interpolation for intermediate values, yet this process is also time-consuming. This paper proposes the implementation of an Adaptive Neuro-Fuzzy Inference …

Case Study Of Coastal Erosion And Measures At Kezailiao Coast, Taiwan, Tai-Wen Hsu, Yi-Tse Tu, Jen-Yi Chang

Journal of Marine Science and Technology

This paper examines major factors of coastal erosion and measures against beach erosion at Kezailiao Coast, Taiwan. Typical examples of coastal erosion due to natural or man-made factors are reviewed. Case studies of countermeasure for beach erosion are addressed. We further analyze and discuss historical shoreline and coastal cliff recession as a result of the attack of storm surges and waves. The coastline mainly made up of cliffs (2-3m high), made of soft, easily eroded boulder sand and clay. In total, 3km of land have been lost since 1951, including villages and farm buildings. The most important impacts of beach …