Life Sciences Commons^™

Supporting Text And Data Analysis Across Campus From The Academic Library, Amy Kirchhoff, Hejin Shin Phd

Digital Initiatives Symposium

The ability to comprehend and communicate with text-based data is essential to future success in academics and employment, as evidenced in a recent survey from Bloomberg Research Services which shows that nearly 97% of survey respondents now use data analytics in their companies and 58% consider data and text mining a business analytics tool (https://www.sas.com/content/dam/SAS/bp_de/doc/studie/ba-st-the-current-state-of-business-analytics-2317022.pdf). This has fueled a substantial growth in text analysis research (involving the use of technology to analyze un- and semi-structured text data for valuable insights, trends, and patterns) across disciplines and a corresponding demand on academic libraries to support text analysis pedagogy and text analysis …

Adapt And Studio: Building The Textbook Of The Future With Next Generation Oer Homework System, Delmar S. Larsen, Josh Halpern

All Things Open

One of the principal limiting factors in large scale adoption of OER is the absence of comparable free or low-cost homework platforms to complement existing and developing OER textbooks. This presentation addresses the LibreTexts efforts to remove this barrier by building and expanding the open-source ADAPT homework system - a central component of the "LibreVerse" ecosystem of courseware technologies - to supplant existing for-profit commercial systems. ADAPT is designed as a centralized OER question bank (>150 k questions) that combines adaptive learning incorporating learning trees with culturally responsive pedagogy for advanced use. We will demonstrate how instructors can use …

La1-Xsrxcoo3 Perovskite Nanomaterial: Synthesis, Characterization, And Its Biomedical Application, Adhira Tippur, Anyet Shohag, Luke Franco, Ahmed Touhami, Swati Mohan, Mohammed Uddin

Research Symposium

Early cancer detection is paramount for effective treatment and potential cures. This research explores the application of perovskite materials, specifically Sr2+-doped Lanthanum Cobaltite (La1-xSrxCoO3) nanomaterials, in cancer detection, with a focus on rats as an experimental model. The ferroelectric nature of these materials, synthesized through a combination of sol-gel and molten-salt processes, was examined at varying Sr2+ doping levels (1-20 wt%). Rigorous characterization, employing X-ray diffraction and scanning electron microscopy, confirmed the uniform morphology of nano cubes, laying the foundation for subsequent investigations. The magnetic properties of the perovskite nanoparticles were probed, suggesting their potential as a diagnostic tool for …

A Machine Learning Model Of Perturb-Seq Data For Use In Space Flight Gene Expression Profile Analysis, Liam F. Johnson, James Casaletto, Lauren Sanders, Sylvain Costes

Graduate Industrial Research Symposium

The genetic perturbations caused by spaceflight on biological systems tend to have a system-wide effect which is often difficult to deconvolute it into individual signals with specific points of origin. Single cell multi-omic data can provide a profile of the perturbational effects, but does not necessarily indicate the initial point of interference within the network. The objective of this project is to take advantage of large scale and genome-wide perturbational datasets by using them to train a tuned machine learning model that is capable of predicting the effects of unseen perturbations in new data. Perturb-Seq datasets are large libraries of …

Evaluating The Environmental Impacts Of U.S. Historical Oil Spill Incidents, Yiming Liu, Hua Cai

Graduate Industrial Research Symposium

Exposure to risks associated with the production and usage of products, particularly oil, poses significant threats to both ecological systems and human health. Notable examples include the Gulf War Oil Spill (1991) and the Deepwater Horizon Oil Spill (2010). However, numerous smaller-scale oil spills, which collectively contribute to substantial oil releases, often remain overlooked. To fill this gap, our study first developed a detailed oil spill incidents database, covering 1967 to 2023. We quantified the released amount (RA) of oil spills recorded by the National Oceanic and Atmospheric Administration (NOAA). Subsequently, we utilized life cycle impact indicators in ReCiPe to …

Autonomous Roadside Mower Testing And Evaluation In Digital Twin Environments, Michael Mardikes, Ethan Brown, Timothy Wiegman, Nathan Sprague, Shreyas Supe, J. T. Evans

Graduate Industrial Research Symposium

Modern day roadside mowing operations in Indiana are performed by contractors operating tractors that pull flex-wing mowers. These mowing operations span over 11,000 miles of road across the state and create serious risk for human operators. Autonomous mowers can provide a safer alternative, but a replacement system must demonstrate an acceptable level of trust before large-scale deployment. A high-fidelity digital-twin environment can facilitate the capability to rapidly test and evaluate platforms in their desired application, while enabling zero real-world risk, a wide range of test variables, and repeatability of a test setup. The simulation environment must be at a level …

Implementing Integrated Stem Forensic And Soil Sciences Lab Activities To Promote Interest In Stem Careers, Mariah K. Stollar Awan, Caroline J. Rakowski

Indiana STEM Education Conference

We implemented forensic and soil science integrated STEM lab activities with 11 middle school youth at a 4-H day camp at Purdue University. STEM perceived knowledge increased overall for participants. However, the pre- and post-assessments did not show a statistically significant difference. More students also indicated STEM career interest after participating. Because this study was exploratory and had a small sample size, more research on these integrated STEM lab activities should be conducted with larger samples.

Controlled Radiation Capsule For Precision And Rapid Cancer Treatment, Hoseon Lee, Zsolt Kollar, Bailey R. White, Junia Nguyen, David Roque, Sowjanya Palagani

Symposium of Student Scholars

This research aims to transform cancer treatment through the optimization of brachytherapy, with a focus on reducing treatment duration, setup complexities, and financial burdens, all while emphasizing patient safety. Patients living at a distance from radiation clinics, particularly those undergoing extended Low Dose Radiation brachytherapy, often struggle with the formidable financial challenges associated with securing nearby accommodations. In response to these issues, the research introduces a radiation capsule designed to condense the conventional six-month treatment period to approximately just one week, thereby significantly reducing the duration of required accommodations. This capsule is especially relevant considering the construction cost of $40 …

Multicellular And Multiscale Models Of Microbes And Host Systems, Elebeoba May

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

12th International Conference On Business, Technology And Innovation 2023, University For Business And Technology - Ubt

UBT International Conference

Welcome to IC – UBT 2023

UBT Annual International Conference is the 12th international interdisciplinary peer reviewed conference which publishes works of the scientists as well as practitioners in the area where UBT is active in Education, Research and Development. The UBT aims to implement an integrated strategy to establish itself as an internationally competitive, research-intensive university, committed to the transfer of knowledge and the provision of a world-class education to the most talented students from all background. The main perspective of the conference is to connect the scientists and practitioners from different disciplines in the same place and make …

I-Guide Climbers: A Model For Multidisciplinary Academic Labs For Early Career Development, Iman Haqiqi, Wei Hu, Ramya Kumaran, Pin-Ching Li, Nicholas Manning, Alex Michels, Ayman Nassar, Jinwoo Park, Jimeng Shi, Adam Tonks, Zhaonan Wang

I-GUIDE Forum

In this paper, we propose a new form of multidisciplinary academic collaboration that goes beyond the traditional modes of knowledge exchange. We argue that most research collaboration today is based on interactions between closely related disciplines, in which researchers share data, methods, and insights within a common framework or problem. However, such collaboration may not foster the development of the communication and management skills essential to a multi-disciplinary research career. Therefore, we suggest establishing a network of researchers from divergent, yet complementary, disciplines who are interested in improving these skills through regular interactions and feedback. The main goal of this …

Engineered Exosomes For The Multimodal Imaging Directed Photo-Immunotherapy Of Colorectal Cancer, Deepak S. Chauhan, Meena Jaggi, Subhash C. Chauhan, Murali M. Yallapu

Research Symposium

Background: Rio Grande Valley experience severe cancer health disparity. A novel therapeutic modality may serve as better therapeutic option. Nanohybrids endowed with multifunctionality, longer circulation time, large surface area have emerged as an active preference for cancer research. However, rising concern of nanomaterials toxicity and scalability issues has slowed their translation to clinics. Exosomes (Exo) are endogenous endocytic origin 40-100 nm vesicles found in various body fluids, which in comparison to synthetic nanoparticles, are biodegradable, highly biocompatible as well as immunocompatible in nature. Although bulk isolation of exosomes from human body fluids is still a problem and engineering of exosomes …

Methane Dynamics Of Kentucky Bottomland Hardwood Forested Systems, Marissa Miles, Jessica B. Moon, Skylar Ross, Jarred Asselta, Niklas Klauss, Rosie Carey, Kabi Raj Khatiwada, Bassil El Masri, Gary Stinchcomb, Benjamin R. K. Runkle

Kentucky Water Resources Annual Symposium

No abstract provided.

Floating Vegetation As A Driver Of Ch4 Emissions In Small Ponds Across Louisville, Ky, Mark Tierney, C. Jalink, J. H. Loughrin, S. W. Antle, Andrew S. Mehring

Kentucky Water Resources Annual Symposium

No abstract provided.

Measuring The Contribution Of Bald Cypress “Knees” To Greenhouse Gas Emissions During Climate Extremes, Skylar Ross, Jessica B. Moon, Niklas Klauss, Marissa Miles, Kabi Raj Khatiwada4, Bassil El Masri, Gary Stinchcomb, Benjamin R. K. Runkle

Kentucky Water Resources Annual Symposium

No abstract provided.

Characterizing Louisville Wetlands From Above And Below To Better Predict Wetland Carbon Sink-Source Status, Andrea E. Gaughan, Andrew S. Mehring, Mark Tierney, David Brown, Kassidy Haynes, Madison Cicha

Kentucky Water Resources Annual Symposium

No abstract provided.

Modeling Epithelial-Mesenchymal Transition In A 3d Multicellular Model Of Tgf-Β1 Signaling, Kristin Kim, Chris Lemmon

Biology and Medicine Through Mathematics Conference

No abstract provided.

Extracting Edges In Space And Time During Visual Fixations, Lynn Schmittwilken, Marianne Maertens

MODVIS Workshop

No abstract provided.

School Of Stem Poster Session, Keith Schimmel

Scholar Week 2016 - present

Location: Reed 2^nd floor Tech Center and lobby

This poster session will include displays of work from the School of STEM - Engineering Senior Design and Freshman Design Projects along with Undergraduate Research.

Senior Design Projects

(1) Holland - Shear-Die [Nathan Marks, Nolan Paape, Seth Beyer]

(2) Aginno - Solar-Powered Fish Pond Aeration System [Hoai Do, Bella Lopez, Kendyl Clark, Megan Schroeder]

(3) Peddinghaus - Tube Conveyor [Carson Caldwell, Alisha Wright, Michael Rollberg, Rebecca Witvoet]

(4) American Institute of Chemical Engineers (AIChE) Student Design Problem [Marissa Anderson, Brady Chambers, Cam Steele]

(5) Kankakee Elks Country Club and Golf …

"Challenging The Known." 16th Annual Research Week: Event Proceedings, University Of The Incarnate Word

Research Week Archived Proceedings

Presentations of completed and ongoing research activity conducted by graduate students, undergraduate students, and faculty at University of the Incarnate Word. Includes poster, podium, visual arts, interactive demo, and creative and performing arts presentations. Coordinated and presented by the Office of Research and Graduate Studies.

Histological Evidence For The Therapeutic Effect Of Chitosan Nanofibrous Dressing On Acute Skin Wounds In A Rat Model, Mahboubeh Ghanbari, Sayed Ahmadreza Razian, Sara Cartwright, Yury Salkovskiy, Jason Mactaggart, Mark A. Carlson

UNO Student Research and Creative Activity Fair

Introduction: Large-area skin traumas, such as thermal burns, are among the most severe health issues that decrease patients’ quality of life and burden healthcare systems. The CDC estimates that there are 1.1 million burns requiring medical attention each year, with more than 20,000 cases involving at least 25% of the body surface, resulting in 4,500 deaths. In addition, about 10,000 people die from burn-related infections. A promising solution to alleviate this problem is using wound dressings based on biopolymers with inherent wound healing properties and biodegradability. One of these biopolymers is chitosan, which is derived from arthropod shells and exhibits …

The Effects Of Demographics And Risk Factors On The Morphological Characteristics Of Human Femoropopliteal Arteries, Sayed Ahmadreza Razian, Majid Jadidi, Alexey Kamenskiy

UNO Student Research and Creative Activity Fair

Background: Disease of the lower extremity arteries (Peripheral Arterial Disease, PAD) is associated with high morbidity and mortality. During disease development, the arteries adapt by changing their diameter, wall thickness, and residual deformations, but the effects of demographics and risk factors on this process are not clear.

Methods: Superficial femoral arteries from 736 subjects (505 male, 231 female, 12 to 99 years old, average age 51±17.8 years) and the associated demographic and risk factor variables were used to construct machine learning (ML) regression models that predicted morphological characteristics (diameter, wall thickness, and longitudinal opening angle resulting from the …

Supporting The 21st Century Classroom: Fostering Relevance And Resilience With Project-Based Learning Curricula, Shari Childers, Kara Fulton

Academic Chairpersons Conference Proceedings

Participants will learn about building and supporting project-based learning (PBL), a scalable, flexible approach to classes and programs that cultivates 21st century competencies in students, including collaboration and resilience. They will re-imagine a course or a program at their own institution from within a PBL context.

Sea-Phages Course-Based Undergraduate Research Experience For Creating A Biotechnology Workforce Development Pipeline, Daphne Fauber, Kari Clase, Carol Weaver

Graduate Industrial Research Symposium

Purdue University has been a member of the SEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science) program since 2011. This program, created in conjunction with the Howard Hughes Medical Institute (HHMI), facilitates undergraduate curriculum for the authentic discovery of novel bacteriophages within the classroom. Since joining the program, undergraduates at Purdue have harnessed wet lab and bioinformatics principles to contribute over 200 previously uncharacterized bacteriophages and 25 novel genomes to the wider scientific literature. The SEA-PHAGES classes at Purdue have resulted in tangible professional deliverables for students through conference presentations and publications. Student outcomes also include transferable skills …

The Next-Gen Crop Nutrient Stress Identification With High-Precision Sensing Technology In Digital Agriculture, Zhihang Song, Ziling Chen, Xing Wei, Jian Jin

Graduate Industrial Research Symposium

Crop yields are facing significant losses from nutrient deficiencies. Over-fertilizing also has negative economic and environmental impacts. It is challenging to optimize fertilizing without an accurate diagnosis. Recently, plant phenotyping has demonstrated outstanding capabilities in estimating crop traits. As one of the leading technologies, LeafSpec, provides high-quality crop image data for improving phenotyping quality. In this study, novel algorithms are developed for LeafSpec to identify crop nutrient deficiencies more accurately. Combined with UAV system, this technology will bring growers a robust solution for fertilizing diagnosis and scientific crop management.

Effects Of Post-Translational Histone Modifications On Transcription Rate, Aaron Bohn

Annual Research Symposium

No abstract provided.

2d Respiratory Sound Analysis To Detect Lung Abnormalities, Rafia Sharmin Alice, Kc Santosh

SDSU Data Science Symposium

Abstract. In this paper, we analyze deep visual features from 2D data representation(s) of the respiratory sound to detect evidence of lung abnormalities. The primary motivation behind this is that visual cues are more important in decision-making than raw data (lung sound). Early detection and prompt treatments are essential for any future possible respiratory disorders, and respiratory sound is proven to be one of the biomarkers. In contrast to state-of-the-art approaches, we aim at understanding/analyzing visual features using our Convolutional Neural Networks (CNN) tailored Deep Learning Models, where we consider all possible 2D data such as Spectrogram, Mel-frequency Cepstral Coefficients …

Session 2: The Effect Of Boom Leveling On Spray Dispersion, Travis A. Burgers, Miguel Bustamante, Juan F. Vivanco

SDSU Data Science Symposium

Self-propelled sprayers are commonly used in agriculture to disperse agrichemicals. These sprayers commonly have two boom wings with dozens of nozzles that disperse the chemicals. Automatic boom height systems reduce the variability of agricultural sprayer boom height, which is important to reduce uneven spray dispersion if the boom is not at the target height.

A computational model was created to simulate the spray dispersion under the following conditions: a) one stationary nozzle based on the measured spray pattern from one nozzle, b) one stationary model due to an angled boom, c) superposition of multiple stationary nozzles due an angled boom, …

Analyzing The Past Five Years Of Equinox Week* Programs Focused On Sustainable Development Goals Within A Collection Of Local And Global Initiatives To Support A Proposal For The Publication Of A Comprehensive Book, Abdoulaye Idrissa

Symposium of Student Scholars

Many undergraduate students are not familiar with the research process involved in a book publication proposal. Through this multidisciplinary collaborative research, the faculty intends to minimize this gap by engaging the students in such a process from the early phase of proposal preparation. The student will research and review the past five years of EQUINOX Week* programs focused on Sustainable Development Goals within a collection of local and global initiatives to support a proposal for the EQUINOX proceeding publication.

With an extensive set of qualitative and quantitative data gathered over a span of 5 years. The student will be …

11th International Conference On Business, Technology And Innovation 2022, University For Business And Technology - Ubt

UBT International Conference

Welcome to IC – UBT 2022

UBT Annual International Conference is the 11th international interdisciplinary peer reviewed conference which publishes works of the scientists as well as practitioners in the area where UBT is active in Education, Research and Development. The UBT aims to implement an integrated strategy to establish itself as an internationally competitive, research-intensive university, committed to the transfer of knowledge and the provision of a world-class education to the most talented students from all background. The main perspective of the conference is to connect the scientists and practitioners from different disciplines in the same place and make …