Life Sciences Commons^™

Characterization Of Indoor Arenas Through An Anonymous Survey, Staci Mcgill, Morgan D. Hayes, Kimberly I. Tumlin, Robert Coleman

Biosystems and Agricultural Engineering Faculty Publications

Equine farms are building both stables for the horses to live in and additional facilities to train and work horses (Kidd et al., 1997). For many of these farms, an outdoor arena that has an all-weather footing is the first working facility built. During inclement weather the ability to train in the outdoor arenas is inhibited, which in turn means the trainers, riders, and farms lose income as money is only made when horses are working, training, and competing. Indoor arenas allow for horses to continue to be worked no matter the weather conditions. The equine industry contributes a total …

Classifying Reflectance Targets Under Ambient Light Conditions Using Passive Spectral Measurements, Ali Hamidisepehr, Michael P. Sama, Joseph S. Dvorak, Ole O. Wendroth, Michael D. Montross

Biosystems and Agricultural Engineering Faculty Publications

Collecting remotely sensed spectral data under varying ambient light conditions is challenging. The objective of this study was to test the ability to classify grayscale targets observed by portable spectrometers under varying ambient light conditions. Two sets of spectrometers covering ultraviolet (UV), visible (VIS), and near−infrared (NIR) wavelengths were instrumented using an embedded computer. One set was uncalibrated and used to measure the raw intensity of light reflected from a target. The other set was calibrated and used to measure downwelling irradiance. Three ambient−light compensation methods that successively built upon each other were investigated. The default method used a variable …

Characterization And Enzyme Engineering Of A Hyperthermophilic Laccase Toward Improving Its Activity In Ionic Liquid, Joseph Craig Stevens, David W. Rodgers, Claire Dumon, Jian Shi

Biosystems and Agricultural Engineering Faculty Publications

Ionic liquids (ILs) are organic salts molten at room temperature that can be used for a wide variety of applications. Many ILs, such as 1-ethyl-3-methylimidazolium acetate ([C₂C₁Im][OAc]), have been shown to remove a significant fraction of the complex biopolymer lignin from biomass during pretreatment. Valorizing lignin via biological pathways (e.g., enzymes) holds promise but is limited by the low biocompatibility of many ILs used for pretreatment. The discovery of thermostable enzymes and the application of enzyme engineering techniques have yielded biocatalysts capable of withstanding high concentrations of ILs. Converting lignin from a waste product to value-added …

Non-Destructive Technologies For Detecting Insect Infestation In Fruits And Vegetables Under Postharvest Conditions: A Critical Review, Akinbode A. Adedeji, Nader Ekramirad, Ahmed Rady, Ali Hamidisepehr, Kevin D. Donohue, Raul T. Villanueva, Chadwick A. Parrish, Mengxing Li

Biosystems and Agricultural Engineering Faculty Publications

In the last two decades, food scientists have attempted to develop new technologies that can improve the detection of insect infestation in fruits and vegetables under postharvest conditions using a multitude of non-destructive technologies. While consumers' expectations for higher nutritive and sensorial value of fresh produce has increased over time, they have also become more critical on using insecticides or synthetic chemicals to preserve food quality from insects' attacks or enhance the quality attributes of minimally processed fresh produce. In addition, the increasingly stringent quarantine measures by regulatory agencies for commercial import-export of fresh produce needs more reliable technologies for …

Fractionation And Characterization Of Lignin Streams From Unique High-Lignin Content Endocarp Feedstocks, Wenqi Li, Kirtley Amos, Mi Li, Yunqiao Pu, Seth Debolt, Arthur J. Ragauskas, Jian Shi

Biosystems and Agricultural Engineering Faculty Publications

Background: Lignin is a promising source of building blocks for upgrading to valuable aromatic chemicals and materials. Endocarp biomass represents a non-edible crop residue in an existing agricultural setting which cannot be used as animal feed nor soil amendment. With significantly higher lignin content and bulk energy density, endo-carps have significant advantages to be converted into both biofuel and bioproducts as compared to other biomass resources. Deep eutectic solvent (DES) is highly effective in fractionating lignin from a variety of biomass feedstocks with high yield and purity while at lower cost comparing to certain ionic liquids.

Results: In the present …

Physio-Chemical And Functional Properties Of Nine Proso Millet Cultivars, Manjot Singh, Akinbode A. Adedeji, Dipak Santra

Biosystems and Agricultural Engineering Faculty Publications

Evaluation of the postharvest properties of nine proso millet cultivars was carried out to determine their physical and engineering properties, which are very useful for designing appropriate systems for process operations such as sorting, drying, heating, cooling, and milling. Nine cultivars of proso millet comprising waxy and non-waxy types, namely Cope, Earlybird, Huntsman, Minco, Plateau, Sunrise, Rise, Dawn, and Panhandle, were obtained from the Panhandle Research and Extension Center, University of Nebraska, Scottsbluff. Results showed significant (p < 0.05) differences in their physical properties, such as sphericity, volume, bulk density, porosity, and angle of repose, which ranged from 0.86 to 0.91, from 3.94 to 5.14 mm³, from 765.49 to 809.67 kg m^-3, from 42.49% to 44.20%, and from 22.98° to 25.74°, respectively. The cultivars were …

Stored Grain Pack Factor Measurements For Soybeans, Grain Sorghum, Oats, Barley, And Wheat, Rumela Bhadra, Mark E. Casada, Aaron P. Turner, Michael D. Montross, Sidney A. Thompson, Samuel G. Mcneill, Ronaldo G. Maghirang, Josephine M. Boac

Biosystems and Agricultural Engineering Faculty Publications

Grain and oilseed crops stored in bins undergo compaction due to overbearing pressure of the grain inside the structure. Thus, volume measurements of grain in bins need to be combined with the amount of packing (usually called pack factor) in addition to the initial density so that the mass in the structure can be calculated. Multiple pack factor prediction methods are in use in the grain industry, but they have only been validated in the literature and compared with field data for corn and hard red winter wheat. Predictions from WPACKING, the program in ASABE Standard EP413.2, and two standard …

Assessing Intra-Event Phosphorus Dynamics In Drainage Water Using Phosphate Stable Oxygen Isotopes, William Ford Iii, Mark R. Williams, Megan B. Young, Kevin W. King, Eric Fischer

Biosystems and Agricultural Engineering Faculty Publications

Quantifying fluxes and pathways of dissolved reactive phosphorus (DRP) in tile-drained landscapes has been hampered by a lack of measurements that are sensitive to P fate and transport processes. One potential tool to help understand these dynamics is the oxygen isotope signature of phosphate (δ¹⁸O_PO4); however, its potential benefits and limitations are not well understood for intra-event dynamics at the field scale. The objectives of this study were to quantify intra-event variability of δ¹⁸O_PO4 signatures in tile drainage water and assess the efficacy of δ¹⁸O_PO4 to elucidate mechanisms and flow …

Application Of Acoustic Emission And Machine Learning To Detect Codling Moth Infested Apples, Mengxing Li, Nader Ekramirad, Ahmed Rady, Akinbode A. Adedeji

Biosystems and Agricultural Engineering Faculty Publications

Incidence of codling moth (CM) (Cydia pomonella L.) infestation in apples has been a major concern in North America for decades. CM larvae bore deep into the fruit, making it unmarketable. An effective noninvasive method to detect larvae-infested apples is necessary to ensure that apples are CM-free in post-harvest processing. In this study, a novel approach using an acoustic emission (AE) system and subsequent machine learning methods was applied to classify larvae-infested apples from intact apples. 'GoldRush‘ apples were infested with CM neonates and stored at the same conditions as intact apples. The AE system was used to collect …

Reducing Equifinality Using Isotopes In A Process-Based Stream Nitrogen Model Highlights The Flux Of Algal Nitrogen From Agricultural Streams, William I. Ford, James F. Fox, Erik Pollock

Biosystems and Agricultural Engineering Faculty Publications

The fate of bioavailable nitrogen species transported through agricultural landscapes remains highly uncertain given complexities of measuring fluxes impacting the fluvial N cycle. We present and test a new numerical model named Technology for Removable Annual Nitrogen in Streams For Ecosystem Restoration (TRANSFER), which aims to reduce model uncertainty due to erroneous parameterization, i.e., equifinality, in stream nitrogen cycle assessment and quantify the significance of transient and permanent removal pathways. TRANSFER couples nitrogen elemental and stable isotope mass‐balance equations with existing hydrologic, hydraulic, sediment transport, algal biomass, and sediment organic …

Efficient Dehydration And Recovery Of Ionic Liquid After Lignocellulosic Processing Using Pervaporation, Jian Sun, Jian Shi, N. V. S. N. Murthy Konda, Dan Campos, Dajiang Liu, Stuart Nemser, Julia Shamshina, Tanmoy Dutta, Paula Berton, Gabriela Gurau, Robin D. Rogers, Blake A. Simmons, Seema Singh

Biosystems and Agricultural Engineering Faculty Publications

Background: Biomass pretreatment using certain ionic liquids (ILs) is very efficient, generally producing a substrate that is amenable to saccharification with fermentable sugar yields approaching theoretical limits. Although promising, several challenges must be addressed before an IL pretreatment technology can become commercially viable. One of the most significant challenges is the affordable and scalable recovery and recycle of the IL itself. Pervaporation (PV) is a highly selective and scalable membrane separation process for quantitatively recovering volatile solutes or solvents directly from non-volatile solvents that could prove more versatile for IL dehydration.

Results: We evaluated a commercially available PV system for …

Using The Vehicle Routing Problem To Reduce Field Completion Times With Multiple Machines, Hasan Seyyedhasani, Joseph S. Dvorak

Biosystems and Agricultural Engineering Faculty Publications

The Vehicle Routing Problem (VRP) is a powerful tool used to express many logistics problems, yet unlike other vehicle routing challenges, agricultural field work consists of machine paths that completely cover a field. In this work, the allocation and ordering of field paths among a number of available machines has been transformed into a VRP that enables optimization of completion time for the entire field. A basic heuristic algorithm (a modified form of the common Clarke-Wright algorithm) and a meta-heuristic algorithm, Tabu Search, were employed for optimization. Both techniques were evaluated through computer simulations in two fields: a hypothetical basic …

Fourth-Generation Fan Assessment Numeration System (Fans) Design And Performance Specifications, Michael P. Sama, George B. Day, Laura M. Pepple, Richard S. Gates

Biosystems and Agricultural Engineering Faculty Publications

The Fan Assessment Numeration System (FANS) is a measurement device for generating ventilation fan performance curves. Three different-sized FANS currently exist for assessing ventilation fans commonly used in poultry and livestock housing systems. All FANS consist of an array of anemometers inside an aluminum shroud that traverse the inlet or outlet of a ventilation fan. The FANS design has been updated several times since its inception and is currently in its fourth-generation (G4). The current design iteration (FANS-G4) is reported in this article with an emphasis on the hardware and software control, data acquisition systems, and operational reliability. Six FANS-G4 …

Toward Biochemical Conversion Of Lignocellulose On-Farm: Pretreatment And Hydrolysis Of Corn Stover In Situ, Alicia A. Modenbach, Sue E. Nokes, Michael D. Montross, Barbara L. Knutson

Biosystems and Agricultural Engineering Faculty Publications

High-solids lignocellulosic pretreatment using NaOH followed by high-solids enzymatic hydrolysis was evaluated for an on-farm biochemical conversion process. Increasing the solids loadings for these processes has the potential for increasing glucose concentrations and downstream ethanol production; however, sequential processing at high-solids loading similar to an on-farm cellulose conversion system has not been studied. This research quantified the effects of high-solids pretreatment with NaOH and subsequent high-solids enzymatic hydrolysis on cellulose conversion. As expected, conversion efficiency was reduced; however, the highest glucose concentration (40.2 g L^-1), and therefore the highest potential ethanol concentration, resulted from the high-solids combined pretreatment …

Application Of Hyperspectral Imaging And Acoustic Emission Techniques For Apple Quality Prediction, Nader Ekramirad, Ahmed Rady, Akinbode A. Adedeji, Reza Alimardani

Biosystems and Agricultural Engineering Faculty Publications

There is a growing demand for developing effective non-destructive quality assessment methods with quick response, high accuracy, and low cost for fresh fruits. In this study, hyperspectral reflectance imaging (400 to 1000 nm) and acoustic emission (AE) tests were applied to ‘GoldRush‘ apples (total number, n = 180) to predict fruit firmness, total soluble solids (TSS), and surface color parameters (L*, a*, b*) during an eight-week storage period. Partial least squares (PLS) regression, least squares support vector machine (LS-SVM), and multivariate linear regression (MLR) methods were used to establish models to predict the quality attributes of the apples. The results …

Development And Evaluation Of A Low-Cost Probe-Type Instrument To Measure The Equilibrium Moisture Content Of Grain, Paul R. Armstrong, Samuel G. Mcneill, Naomi Manu, Augustine Bosomtwe, James K. Danso, Enoch Osekre, George Opit

Biosystems and Agricultural Engineering Faculty Publications

Storage of grain in bags is common in Africa, Asia, and many other less developed countries making a bag probing method well-suited for moisture content (MC) measurement. A low-cost meter was developed under a USAID project to reduce post-harvest loss (PHL). The meter, referred to as the PHL meter, measures the MC of maize and other grains based on relative humidity (RH) and temperature (T) measurements obtained by a small digital sensor located in the tip of a tubular probe that can be inserted into bags of grain or other grain bulks. Measurements are used by equilibrium moisture content (EMC) …

Evaluating Ventilation Rates Based On New Heat And Moisture Production Data For Swine Production, Yanxi Lu, Morgan D. Hayes, John P. Stinn, Tami M. Brown-Brandl, Hongwei Xin

Biosystems and Agricultural Engineering Faculty Publications

Heat and moisture production (HMP) rates of animals are used for calculation of ventilation rate (VR) in animal housing. New swine HMP data revealed considerable differences from previously reported data. This project determined new design VRs and evaluated differences from previously recommended VRs. The swine production stages evaluated included gestation, farrowing, nursery, growing, and finishing. The ranges of ambient temperature and ambient relative humidity (RH) evaluated for VR were -25°C to 15°C in 10°C increments and 15% to 75% in 15% increments, respectively. Indoor set points for temperature and RH were, respectively, 15°C, 20°C, 25°C and 60%, 70%, 80% for …

Evaluating A New Shade For Feedlot Cattle Performance And Heat Stress, Morgan D. Hayes, Tami M. Brown-Brandl, Roger A. Eigenberg, Larry A. Kuehn, R. Mark Thallman

Biosystems and Agricultural Engineering Faculty Publications

Heat stress in cattle results in decreased feed intake, lower daily gain, and potentially death in susceptible animals under intense conditions. A study was carried out during the summer of 2013 at the USDA-ARS U.S. Meat Animal Research Center feedlot evaluating the impact of shade on environmental conditions and cattle performance. A novel two-tiered shade was used in half of the 14 pens, each holding 30 animals. The shades were designed to reduce solar heat load by 40% to 60% and to provide traveling shade across the pen, providing varied amounts of shade area as well as varied solar reduction …

Effects Of Biochar Treatment Of Municipal Biosolids And Horse Manure On Quality Of Runoff From Fescue Plots, Rachel Williams, Dwayne R. Edwards

Biosystems and Agricultural Engineering Faculty Publications

Land-applied horse manure and municipal biosolids can increase nutrient and bacteria concentrations in runoff. Biochar has been demonstrated to have beneficial impacts on nutrient retention and runoff quality when used to treat other land-applied organic soil amendments (e.g., poultry manure). The objective of this study was to evaluate the effects of biochar addition to horse manure and municipal biosolids on runoff concentrations of nutrients and fecal coliforms. Biochar was added at 5% to 8% (wet basis) to horse manure and biosolids that were applied to 2.4 m x 6.1 m fescue plots followed by application of simulated rainfall (102 mm …

Stored Grain Volume Measurement Using A Low Density Point Cloud, Aaron P. Turner, Joshua J. Jackson, Nicole K. Koeninger, Samuel G. Mcneill, Michael D. Montross, Mark E. Casada, Josephine M. Boac, Rumela Bhadra, Ronaldo G. Maghirang, Sidney A. Thompson

Biosystems and Agricultural Engineering Faculty Publications

This technical note presents the development of a new apparatus and data processing method to accurately estimate the volume of stored grain in a bin. Specifically, it was developed to account for the variability in surface topography that can occur in large diameter bins when partially unloaded. This was accomplished using a laser distance meter to create a low density point cloud, from which a surface was interpolated using ArcMap geoprocessing tools. The manually controlled and portable system was designed to hold the laser distance meter and provided a common reference point. The data from the laser distance meter was …

Field-Observed Angles Of Repose For Stored Grain In The United States, Rumela Bhadra, Mark E. Casada, Sidney A. Thompson, Josephine M. Boac, Ronaldo G. Maghirang, Michael D. Montross, Aaron P. Turner, Samuel G. Mcneill

Biosystems and Agricultural Engineering Faculty Publications

Bulk grain angle of repose (AoR) is a key parameter for inventorying grain, predicting flow characteristics, and designing bins and grain handling systems. The AoR is defined for two cases, piling (dynamic) or emptying (static), and usually varies with grain type. The objective of this study was to measure piling angles of repose for corn, sorghum, barley, soybeans, oats, and hard red winter (HRW) wheat in steel and concrete bins in the United States. Angles were measured in 182 bins and 7 outdoor piles. The piling AoR for corn ranged from 15.7° to 30.2° (median of 20.4° and standard deviation …

A Method For Reflectance Index Wavelength Selection From Moisture-Controlled Soil And Crop Residue Samples, Ali Hamidisepehr, Michael P. Sama, Aaron P. Turner, Ole O. Wendroth

Biosystems and Agricultural Engineering Faculty Publications

Reflectance indices are a method for reducing the dimensionality of spectral measurements used to quantify material properties. Choosing the optimal wavelengths for developing an index based on a given material and property of interest is made difficult by the large number of wavelengths typically available to choose from and the lack of homogeneity when remotely sensing agricultural materials. This study aimed to determine the feasibility of using a low-cost method for sensing the moisture content of background materials in traditional crop remote sensing. Moisture-controlled soil and wheat stalk residue samples were measured at varying heights using a reflectance probe connected …

Ammonia And Carbon Dioxide Emissions Of Three Laying-Hen Housing Systems As Affected By Manure Accumulation Time, Timothy A. Shepherd, Hongwei Xin, John P. Stinn, Morgan D. Hayes, Yang Zhao, Hong Li

Biosystems and Agricultural Engineering Faculty Publications

Laying-hen housing design and management are the most significant factors affecting the generation and release of gaseous ammonia to the atmosphere. Transitioning the hen housing type from traditional high-rise (where manure is stored within the house for about one year) to modern manure-belt style (where manure is removed every 1 to 4 d and placed into long-term storage) has significantly improved in-barn air quality and reduced farm-level ammonia emissions. As a direct result of the advantages, 100% of new construction for U.S. egg production incorporates manure-belt systems that regularly remove manure from the houses. However, manure-belt system designs (e.g., active …

Equilibrium Moisture Content Of Kabuli, Chickpea, Black Sesame, And White Sesame Seeds, Paul R. Armstrong, Elizabeth B. Maghirang, Bhadriraju Subramanyam, Samuel G. Mcneill

Biosystems and Agricultural Engineering Faculty Publications

Sesame and chickpea are important crops in Ethiopia because both are major export crops that generate much revenue for both small farmers and the country as a whole. However, there is a lack of information about the fundamental equilibrium moisture content (EMC) relationships among these crops, which would help facilitate better monitoring and storage. Therefore, EMC adsorption and desorption prediction models based on temperature (T) and relative humidity (RH) were developed for the modified Chung-Pfost and modified Henderson models for Kabuli chickpea (KC), black sesame (BS), and white sesame (WS) seeds. The samples for conducting the adsorption and desorption tests …

The Confounding Effects Of Particle Size And Substrate Bulk Density On Phanerochaete Chrysosporium Pretreatment On Panicum Virgatum, Amanda N. Hickman, Sue E. Nokes, William S. Sympson, Mathew J. Ruwaya, Michael D. Montross, Barbara L. Knutson

Biosystems and Agricultural Engineering Faculty Publications

Phanerochaete chrysosporium treatment is less effective as a biological pretreatment on feedstock with larger particle sizes. We hypothesized that the improved effectiveness of the pretreatment when smaller particle sizes are used may be due to the inherently higher bulk density with smaller particle sizes. The effects of substrate bulk density and particle size on the efficacy of P. chrysosporium pretreatment of switchgrass (Panicum virgatum) was tested experimentally. Phanerochaete chrysosporium was grown on senesced switchgrass (2 different particle sizes) with various bulk densities. In all treatments, the fungal-pretreated samples released more glucose during enzymatic saccharification than the control sample. …

Physicochemical And Functional Properties Of Extruded Sorghum‐Based Bean Analog, Akinbode A. Adedeji, Michael V. Joseph, Brian Platter, Sajid Alavi

Biosystems and Agricultural Engineering Faculty Publications

The objective of this study was to develop and evaluate the physicochemical and functional properties of a bean like product made from cold extrusion of sorghum, soy and wheat flours. Formulated samples comprised of sorghum (25–70%), wheat (0–35%) and soy (30–50%) flours. The degree of gelatinization ranged from 54.1 to 93.6%. Pasting curves showed minimal starch damage with peak and final viscosities in the range of 456.0–1138.5 and 297–584 cP, respectively. Textural properties of the extrudates were significantly impacted by starch content and cooking time. There was significant cooking loss due to poor binding properties of the extrudates. Cooking the …

Wet Grain Delivery Advice: A Previously Impossible Extension Challenge Solved Through App Technology, Joseph S. Dvorak, Sam Mcneill, Clint Hardy

Biosystems and Agricultural Engineering Faculty Publications

The delivery of wet grain during harvest is a complex and constantly changing problem about which Extension professionals have been unable to offer more than general advice. By capitalizing on important characteristics of mobile devices, a new app enables producers to fully benefit from detailed information universities have generated on grain drying and costs associated with delivery of grain to different locales. Development of such an app demonstrates the power of apps and mobile devices in allowing Extension to deliver previously unattainable services to its clientele.

Nozzle Sensor For In-System Chemical Concentration Monitoring, Joseph S. Dvorak, Timothy S. Stombaugh, Yongbo Wan

Biosystems and Agricultural Engineering Faculty Publications

Chemical concentration is a vital parameter for determining appropriate chemical application. This study describes the design and testing of a sensor that attempted to monitor concentration of chemicals upstream from each nozzle body. The sensor is based on an LED and photodiode pair. Its ability to detect chemical concentration within the main carrier was tested with a 2,4-D formulation, a glyphosate formulation, and a powdered Acid Blue 9 dye. The liquid herbicide formulations of glyphosate and 2,4-D were tested across common application concentrations of 0% to 12.5% by volume. The powdered dye produced a much stronger effect on the sensor …

Effects Of Chemical Amendments To Swine Manure On Runoff Quality, Elizabeth L. Bullock, Dwayne R. Edwards, Phillip A. Moore Jr., Richard S. Gates

Biosystems and Agricultural Engineering Faculty Publications

Land-applied swine manure can be an environmental concern when runoff losses of manure constituents occur. The use of chemical amendments to mitigate these losses has been investigated for poultry litter, but materials such as swine manure have received less attention in this context, particularly at the plot scale or larger. The objective of this experiment was to evaluate the impacts of aluminum sulfate (alum; Al₂(SO₄)₃), aluminum chloride (AlCl₃), and ferric chloride (FeCl₃) addition on runoff of selected constituents of land-applied swine manure. Manure was collected from feeder pigs fed a …

Error Analysis Of Stored Grain Inventory Determination, Aaron P. Turner, Michael D. Montross, Joshua J. Jackson, Samuel G. Mcneill, Mark E. Casada, Josephine M. Boac, Rumela Bhadra, Ronaldo G. Maghirang, Sidney A. Thompson

Biosystems and Agricultural Engineering Faculty Publications

Estimation of the quantity of stored grain is important for crop insurance, financial statements, and inventory control. Traditionally, the height of grain has been measured using weighted tape measures, and the volume is subsequently computed using standard geometric shapes (cylinders and cones) along with visual correction of the grain surface. Field measurements by four trained USDA Farm Service Agency and crop insurance agents on older farm-sized bins (8.2 to 11.0 m, or 27 to 36 ft, in diameter) resulted in standard deviations between 0.02 and 0.30 m for the equivalent height when the grain surface was not level. The largest …