Life Sciences Commons^™

Snp Genotyping For Purity Assessment Of A Forage Oat (Avena Sativa L.) Variety From Colombia, Luis Fernando Campuzano-Duque, Diego Bejarano-Garavito, Javier Castillo-Sierra, Daniel Ricardo Torres-Cuesta, Andrés J. Cortés, Matthew Wohlgemuth Blair

Agricultural and Environmental Sciences Faculty Research

Single nucleotide polymorphism (SNP) markers have multiple applications in plant breeding of small grains. They are used for the selection of divergent parents, the identification of genetic variants and marker-assisted selection. However, the use of SNPs in varietal purity assessment is under-reported, especially for multi-line varieties from the public sector. In the case of variety evaluation, these genetic markers are tools for maintaining varietal distinctness, uniformity and stability needed for cultivar release of multi-line or pure-line varieties of inbred crops. The objective of this research was to evaluate the purity and relationships of one original (AV-25) and two multi-line sub-populations …

Effect Of Solitary And Combined Use Of Cover Crops On Soilborne Disease Suppressiveness In Woody Ornamental Nursery Production Systems, Madhav Parajuli, Fulya Baysal-Gurel, Milan Panth

Student Research

Cover crops are known to be effective in reducing soilborne diseases in woody ornamentals. However, it remains unknown how solitary and combined uses of cover crops influence soilborne disease, and whether these effects differ with seed rate. The objective of this study was to explore the impacts of cover crops, in solitary and combined use, on soilborne disease suppressiveness in woody ornamental nursery production systems. Soils were sampled from the established red maple (Acer rubrum L.) plantation grown with and without cover crops [crimson clover (Trifolium incarnatum L.)] or triticale (× Triticosecale W.) or (their mixture)] following the cover crop …

Effect Of Winter Canola Cultivar On Seed Yield, Oil, And Protein Content, Kyle D. Mcgeary, Jason P. De Koff, Bharat Pokharel, Richard Link, Priya Saini, Taqdeer Gill

Agricultural and Environmental Sciences Faculty Research

Winter canola (Brassica napus L.) production has increased in the United States over the past several decades; however, there is little research in the southeastern United States on its agronomic production and growth characteristics under different nitrogen (N) fertilizer rates. The objectives of this study were to determine the effects of N rates on winter mortality, yield, oil and protein content, and seedpod shatter resistance across cultivars. Canola was grown in a randomized split complete block design with four replicates under five different N rates (0, 56, 112, 168, and 224 kg N ha−1) with four different cultivars (Hekip, Inspiration, …

Bases For The Establishment Of Robusta Coffee (Coffea Canephora) As A New Crop For Colombia, Luis F. Campuzano-Duque, Juan Carlos Herrera, Claire Ged, Matthew Wohlgemuth Blair

Agricultural and Environmental Sciences Faculty Research

Robusta coffee (C. canephora) covers 36% of world coffee production and has strategic relevance as a beverage that it is produced by thousands of small-scale producers around the world. Although mainly grown in Africa and Asia as opposed to Latin America, this situation is changing. Colombia is recognized as a producer of high-quality Arabica (C. arabica L.) coffee, however we argue that Robusta represents a great economic opportunity for small scale producers, for the industrialization of new products and for emerging coffee chains. Therefore, the objective of this review is to outline the agronomic value of Robusta coffee as a …

Identification Of Bacterial Wilt (Erwinia Tracheiphila) Resistances In Usda Melon Collection, Bimala Acharya, Lucas Mackasmiel, Ali Taheri, Christine A. Ondzighi-Assoume, Yiqun Weng, C. Korsi Dumenyo

Agricultural and Environmental Sciences Faculty Research

Bacterial wilt (BW) caused by the Gram-negative bacterium, Erwinia tracheiphila (Et.), is an important disease in melon (Cucumis melo L.). BW-resistant commercial melon varieties are not widely available. There are also no effective pathogen-based disease management strategies as BW-infected plants ultimately die. The purpose of this study is to identify BW-resistant melon accessions in the United States Department of Agriculture (USDA) collection. We tested 118 melon accessions in two inoculation trials under controlled environments. Four-week-old seedlings of test materials were mechanically inoculated with the fluorescently (GFP) labeled or unlabeled E. tracheiphila strain, Hca1-5N. We recorded the number of days to …

Effect Of Volatile Compounds Produced By Selected Bacterial Endophytes In Promoting Plant Growth, Asha Maheshwari, Margaret T. Mmbaga, Bandana Bhusal, Christine A. Ondzighi-Assoume

Agricultural and Environmental Sciences Faculty Research

Bacterial endophytes selected for their capability to suppress diverse fungal pathogens in vitro and in greenhouse studies have been shown to promote plant growth. The effect of volatile compounds emitted by selected bacteria on plant growth in Arabidopsis thaliana, tomato (Solanum lycopersicum), sweet pepper (Capsicum annuum), and cucumbers (Cucumis sativus) was evaluated on container-grown plants nested above bacterial cultures, with roots exposed to the volatiles without direct contact between bacterial cells and the plant roots. Significant increases in plant growth were observed in plant height, root length, leaf size, fresh weight, and chlorophyll content in all plants tested. Although diverse …

Organic And Conventional Sweetpotato Production In The Southeastern Of United States: A Comparative Analysis, Sochinwechi Nwosisi, Prabodh Illukpitiya, Dilip Nandwani, Ismail Tubosun Arebi, Obinna Nwosisi

Agricultural and Environmental Sciences Faculty Research

Background

There has been a piqued interest in alternative agricultural production systems that are environmentally friendly due to concerns on how sustainable it is to grow conventionally. However, in the producer’s point of view, economic returns are an important issue in decision-making in adaptation. The purpose of this study is to assess the economic risk of conventional and organic sweetpotato production in the Southeastern US. The primary and secondary data were used for the analysis. We identified risk variables in stochastic profit function and performed Monte Carlo simulation in analyzing profitability and economic risk of conventional and organic production systems. …

Response Of Cover Crops To Phytopythium Vexans, Phytophthora Nicotianae, And Rhizoctonia Solani, Major Soilborne Pathogens Of Woody Ornamentals, Milan Panth, Anthony L. Witcher, Fulya Baysal-Gurel

Agricultural and Environmental Sciences Faculty Research

Management of plant diseases is a subject of concern for researchers as well as growers. Different management practices are being developed and used to combat the rising number of plant pathogens, which threaten nursery crop production. Use of cover crops for sustainable management of soilborne diseases is being explored as an alternative strategy to the chemicals. However, the potential threat of these cover crops acting as a secondary host of these devastating soilborne pathogens has not been described. We studied the response of the major cover crops being used by woody ornamental growers in the Southeastern United States to Phytopythium …

The Effects Of Tunnel Technology On Crop Productivity And Livelihood Of Smallholder Farmers In Nepal, Diwakar Kc, Dinesh Jamarkattel, Tek Maraseni, Dilip Nandwani, Pratibha Karki

Agricultural and Environmental Sciences Faculty Research

Technologies-based production practices are critical for agricultural growth and sustainable development in low-income countries like Nepal. In the last few years, tunnel house has been increasingly promoted as tools to enhance smallholder farmers’ livelihood and tackle climate adversaries. However, little is known about what factor determines its adoption and whether it helps smallholders adapt to climate change and experience better livelihood. We address these gaps using the cross-sectional survey data collected from 62 adopters and 92 non-adopters in three municipalities of Bagmati Province. We employed descriptive analysis and probit model and found out that age, farm size, and ethnicity strongly …

A Research Road Map For Responsible Use Of Agricultural Nitrogen, Michael Udvardi, Frederick E. Below, Michael J. Castellano, Alison J. Eagle, Ken E. Giller, Jagdish Kumar Ladha, Xuejun Liu, Tai Mcclellan Maaz, Barbara Nova-Franco, Nandula Raghuram, G. Philip Robertson, Sonali Roy, Malay Saha, Susanne Schmidt, Mechthild Tegeder, Larry M. York, John W. Peters

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) is an essential but generally limiting nutrient for biological systems. Development of the Haber-Bosch industrial process for ammonia synthesis helped to relieve N limitation of agricultural production, fueling the Green Revolution and reducing hunger. However, the massive use of industrial N fertilizer has doubled the N moving through the global N cycle with dramatic environmental consequences that threaten planetary health. Thus, there is an urgent need to reduce losses of reactive N from agriculture, while ensuring sufficient N inputs for food security. Here we review current knowledge related to N use efficiency (NUE) in agriculture and identify research …

Effects Of Nitrogen Fertilization And Bioenergy Crop Species On Central Tendency And Spatial Heterogeneity Of Soil Glycosidase Activities, Min Yuan, Jianjun Duan, Jianwei Li, Siyang Jian, Lahiru Gamage, Kudjo E. Dzantor, Dafeng Hui, Philip A. Fay

Agricultural and Environmental Sciences Faculty Research

Extracellular glycosidases in soil, produced by microorganisms, act as major agents for decomposing labile soil organic carbon (e.g., cellulose). Soil extracellular glycosidases are significantly affected by nitrogen (N) fertilization but fertilization effects on spatial distributions of soil glycosidases have not been well addressed. Whether the effects of N fertilization vary with bioenergy crop species also remains unclear. Based on a 3-year fertilization experiment in Middle Tennessee, USA, a total of 288 soil samples in topsoil (0–15 cm) were collected from two 15 m2 plots under three fertilization treatments in switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.) …

Impacts Of Organic And Conventional Management On The Nutritional Level Of Vegetables, Atanu Mukherjee, Emmanuel C. Omondi, Paul R. Hepperly, Rita Seidel, Wade P. Heller

Agricultural and Environmental Sciences Faculty Research

The nutrient concentration of fruits and vegetables in the U.S.A. has declined in the past 50–70 years. Crop management practices utilizing on-farm inputs are thought to increase crop nutritional quality, but few studies have evaluated this under long-term side-by-side trials. An experiment was conducted from 2004 to 2005 at Rodale Institute’s long-term Farming Systems Trial to investigate the nutritional quality of vegetables under organic manure (MNR) and conventional (CNV) farming systems, with or without arbuscular mycorrhizal fungi (AMF) treatment. AMF reduced the vitamin C content in carrots in both systems in 2004, but the reduction was 87% in CNV and …

Pre-Emergence Herbicides And Mulches For Weed Control In Cutting Propagation, Anthony L. Witcher, Isha Poudel

Agricultural and Environmental Sciences Faculty Research

Weed control is critical in cutting propagation to maximize root growth and liner quality, but hand weeding is time consuming and not cost efficient. Pre-emergence herbicides are widely used in container-grown nursery crop production, but concerns of potential phytotoxicity have limited widespread use in propagation. Mulches are a viable alternative for weed control but few products have been evaluated in propagation. Five pre-emergence herbicides and five mulches were evaluated for rooting stem cuttings of three nursery crop species and for control of four weed species. Mulches were applied (0.8 cm depth) prior to sticking cuttings while pre-emergence herbicides were applied …

Container Color And Compost Substrate Affect Root Zone Temperature And Growth Of “Green Giant” Arborvitae, Anthony L. Witcher, Jeremy M. Pickens, Eugene K. Blythe

Agricultural and Environmental Sciences Faculty Research

Container-grown nursery crops are commonly exposed to root zone stress due to inadequate moisture and supraoptimal root zone temperature (RZT). Compost substrates can improve water and nutrient retention but plant responses can vary due to physical and chemical properties. Dark color containers absorb solar radiation through the container side wall leading to excessive heat buildup in the substrate, yet white containers can reduce RZT. Compost substrates and container color were examined for effects on RZT and growth of “Green Giant” arborvitae (Thuja standishii × plicata “Green Giant”). “Green Giant” arborvitae were transplanted into white or black containers (11.3 L) filled …

Effects Of Nitrogen Fertilization And Bioenergy Crop Type On Topsoil Organic Carbon And Total Nitrogen Contents In Middle Tennessee Usa, Jianwei Li, Siyang Jian, Chad S. Lane, Yuehan Lu, Xiaorui He, Gangsheng Wang, Melanie A. Mayes, Kudjo E. Dzantor, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) fertilization affects bioenergy crop growth and productivity and consequently carbon (C) and N contents in soil, it however remains unclear whether N fertilization and crop type individually or interactively influence soil organic carbon (SOC) and total N (TN). In a three-year long fertilization experiment in switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.) croplands in Middle Tennessee USA, soil samples (0–15cm) were collected in plots with no N input (NN), low N input (LN: 84 kg N ha-1 yr-1 in urea) and high N input (HN: 168 kg N ha-1 yr-1 in urea). Besides SOC …

Variation Analysis Of Root System Development In Wheat Seedlings Using Root Phenotyping System, Ekundayo Adeleke, Reneth Millas, Waymon Mcneal, Justin Faris, Ali Taheri

Agricultural and Environmental Sciences Faculty Research

Root system architecture is a vital part of the plant that has been shown to vary between species and within species based on response to genotypic and/or environmental influences. The root traits of wheat seedlings are critical for their establishment in soil and evidently linked to plant height and seed yield. However, plant breeders have not efficiently developed the role of RSA in wheat selection due to the difficulty of studying root traits. We set up a root phenotyping platform to characterize RSA in 34 wheat accessions. The phenotyping pipeline consists of the germination paper-based moisture replacement system, image capture …

Nitrogen Fertilization Restructured Spatial Patterns Of Soil Organic Carbon And Total Nitrogen In Switchgrass And Gamagrass Croplands In Tennessee Usa, Jianwei Li, Siyang Jian, Chad S. Lane, Chunlan Guo, Yuehan Lu, Qi Deng, Melanie A. Mayes, Kudjo E. Dzantor, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) fertilizers can potentially alter spatial distribution of soil organic carbon (SOC) and total nitrogen (TN) concentrations in croplands such as switchgrass (SG: Panicum virgatum L.) and gamagrass (GG: Tripsacum dactyloides L.), but it remains unclear whether these effects are the same between crops and under different rates of fertilization. 13C and 15N are two important proxy measures of soil biogeochemistry, but they were rarely examined as to their spatial distributions in soil. Based on a three-year long fertilization experiment in Middle Tennessee, USA, the top mineral horizon soils (0–15 cm) were collected using a spatially explicit design within …

Detection Of Novel Allelic Variations In Soybean Mutant Population Using Tilling By Sequencing, Reneth Millas, Mary Espina, C. M. Sabbir Ahmed, Angelina Bernardini, Ekundayo Adeleke, Zeinab Yadegari, Korsi Dumenyo, Ali Taheri

Agricultural and Environmental Sciences Faculty Research

One of the most important tools in genetic improvement is mutagenesis, which is a useful tool to induce genetic and phenotypic variation for trait improvement and discovery of novel genes. JTN-5203 (MG V) mutant population was generated using an induced ethyl methane sulfonate (EMS) mutagenesis and was used for detection of induced mutations in FAD2-1A and FAD2-1B genes using reverse genetics approach. Optimum concentration of EMS was used to treat 15,000 bulk JTN-5203 seeds producing 1,820 M2 population. DNA was extracted, normalized, and pooled from these individuals. Specific primers were designed from FAD2-1A and FAD2-1B genes that are involved in …

Mulch Treatment Effect On Weed Biomass And Yields Of Organic Sweetpotato Cultivars, Sochinwechi I Nwosisi, Dilip Nandwani, Dafeng Hui

Biology Faculty Research

Weeds are a challenge, particularly in organic agriculture, due to restrictions on the application of synthetic herbicides and chemicals. A preliminary cultivar evaluation trial of organic sweetpotato was conducted in 2015 at Tennessee State University certified organic farm. Three mulches: wheat straw, pine needle, and black plastic mulch, along with a control (no mulch), were evaluated for their weed management abilities in a sweetpotato field. Four cultivars of sweetpotato were planted in 0.91 m wide mulch beds with 0.3 m row spacing anddrip irrigated with four replications. Data was collected during the growing season on the dry weight of weeds …

Nitrogen Fertilization Elevated Spatial Heterogeneity Of Soil Microbial Biomass Carbon And Nitrogen In Switchgrass And Gamagrass Croplands, Jianwei Li, Chunlan Guo, Siyang Jian, Qi Deng, Chih-Li Yu, Kudjo E. Dzantor, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

The effects of intensive nitrogen (N) fertilizations on spatial distributions of soil microbes in bioenergy croplands remain unknown. To quantify N fertilization effect on spatial heterogeneity of soil microbial biomass carbon (MBC) and N (MBN), we sampled top mineral horizon soils (0-15 cm) using a spatially explicit design within two 15-m2 plots under three fertilization treatments in two bioenergy croplands in a three-year long fertilization experiment in Middle Tennessee, USA. The three fertilization treatments were no N input (NN), low N input (LN: 84 kg N ha−1 in urea) and high N input (HN: 168 kg N ha−1 in urea). …

Warming Deferentially Altered Multidimensional Soil Legacy Induced By Past Land Use History, Weiling Dong, Alin Song, Xueduan Liu, Bing Yu, Boren Wang, Yuqiu Lu, Yanling Li, Huaqun Yin, Jianwei Li, Fenliang Fan

Agricultural and Environmental Sciences Faculty Research

The legacy effects of previous land use and climate history may affect current soil function. However, the manner in which these legacy effects of land use are modulated by the subsequent climate remains unclear. For this reason, we investigated how the legacies of soil multiple functions left by conversion of grassland to agricultural management were mediated by climate warming with a reciprocal transplant approach. The overall legacy was further separated into the contributions by changes in the abiotic properties of the soil (abiotic process) and microbial community (biotic process). We here hypothesized that warming may mediate the legacy effects of …

Volunteer Corn (Zea Mays) Interference In Dry Edible Bean (Phaseolus Vulgaris), Gustavo M. Sbatella, Andrew R. Kniss, Emmanuel C. Omondi, Robert G. Wilson

Agricultural and Environmental Sciences Faculty Research

Volunteer corn can affect dry bean by reducing yields; expanding the life cycle of insects, mites, and pathogens; interfering with harvest; and contaminating bean seed. Field studies were conducted at Lingle, WY, and Scottsbluff, NE, to determine the relationship between volunteer corn density and dry bean yield, establish the proper time of volunteer corn removal, and determine whether dry bean yield was affected by the method used to remove volunteer corn. Volunteer corn reduced dry bean yields, as recorded in other crops. Growing conditions for each location were different, as indicated by the accumulated growing degree days (GDD): Lingle 2008 …

Effect Of Bacteria Isolates In Powdery Mildew Control In Flowering Dogwoods (Cornus Florida L.), Margaret T. Mmbaga, Frank A. Mrema, Lucas Mackasmiel, Emily Rotich

Agricultural and Environmental Sciences Faculty Research

Five bacterial isolates collected from dogwood leaves were evaluated for powdery mildew control in shadehouse and greenhouse environments by using foliar sprays and/or root drenching. Two isolates displayed superior bioactivity and suppressed powdery mildew similar to conventional fungicide thiophanate methyl (Cleary’s 3336F®). The two bacteria disrupted powdery mildew spore germination and ruptured spore membranes causing spore lyses. Bacterial filtrates without bacterial cells were also effective in suppressing powdery mildew and disrupting spore germination and suggested the involvement of secondary metabolites. The two biocontrol agents (BCAs) colonized roots endophytically and promoted plant growth.

Weed Dynamics During Transition To Conservation Agriculture In Western Kenya Maize Production, Judith A. Odhiambo, Urszula Norton, Dennis Ashilenje, Emmanuel C. Omondi, Jay B. Norton

Agricultural and Environmental Sciences Faculty Research

Weed competition is a significant problem in maize (Zea mays, L.) production in Sub-Saharan Africa. Better understanding of weed management and costs in maize intercropped with beans (Phaseolus vulgaris, L.) during transition to conservation agricultural systems is needed. Changes in weed population and maize growth were assessed for a period of three years at Bungoma where crops are grown twice per year and at Trans-Nzoia where crops are grown once per year. Treatments included three tillage practices: minimum (MT), no-till (NT) and conventional (CT) applied to three cropping systems: continuous maize/bean intercropping (TYPICAL), maize/bean intercropping with relayed mucuna after bean …

Interplanting Annual Ryegrass, Wheat, Oat, And Corn To Mitigate Iron Deficiency In Dry Beans, Emmanuel Chiwo Omondi, Andrew R. Kniss

Agricultural and Environmental Sciences Faculty Research

This study evaluated whether grass intercropping can be used to alleviate Fe deficiency chlorosis in dry beans (Phaseolus vulgaris L.) grown in high pH, calcareous soils with low organic matter. Field studies were conducted at the University of Wyoming Sustainable Agriculture Research and Extension Center in 2009 and 2010. Black- and navy beans were grown alone or intercropped with annual ryegrass (Lolium multiflorum Lam.), oat (Avena sativa L.), corn (Zea mays L.), or spring wheat (Triticum aestivum L.) in a two-factor factorial strip-plot randomized complete block design. All four grass species increased chlorophyll intensity in dry beans. However, grass species …

Soil Carbon And Nitrogen Mineralization And Crop Parameters In Typical Maize-Bean Intercropping In Western Kenya, Judith A. Odhiambo, Urszula Norton, Emmanuel C. Omondi, Dennis Ashilenje, Jay B. Norton

Agricultural and Environmental Sciences Faculty Research

Smallholder farmers in western Kenya who plant maize (Zea mays L.) intercropped with beans (Phaseolus vulgaris L.) face many challenges associated with nutrient-poor soils and weather-related crop failures. In regions where temperatures are favorable, crops are grown twice per year during long and short rainy seasons and in other regions, once per year during one long growing season. Growing crops two times per year necessitates frequent land preparation using inversion-type tillage. Little is known about the impact of current tillage-intensive crop management on annual soil organic matter (SOM) recovery. The aim of this study was to assess changes to soil …

Effects Of Organic And Inorganic Fertilizers On Marigold Growth And Flowering, Guihong Bi, William B. Evans, James M. Spiers, Anthony L. Witcher

Agricultural and Environmental Sciences Faculty Research

Two experiments were conducted to evaluate the growth and flowering responses of greenhouse-grown French marigold (Tagetes patula L. ‘Janie Deep Orange’) to two non-composted broiler chicken litter-based organic fertilizers, 4-2-2 and 3-3-3, and one commonly used synthetic controlled-release fertilizer, 14-14-14. In both experiments, fertilizer 4-2-2 was applied at four rates of 1%, 2%, 4%, and 6% (by volume); 3-3-3 was applied at four rates of 1.34%, 2.67%, 5.34%, and 8.0% (by volume); and 14-14-14 was applied at rates of 0.99, 1.98, 3.96, and 5.94 kg·m−3. In general, substrate containing different rates and types of fertilizers had a pH within the …