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Full-Text Articles in Computer Engineering

Machine Learning For Omics Data Analysis., Ameni Trabelsi May 2018

Machine Learning For Omics Data Analysis., Ameni Trabelsi

Electronic Theses and Dissertations

In proteomics and metabolomics, to quantify the changes of abundance levels of biomolecules in a biological system, multiple sample analysis steps are involved. The steps include mass spectrum deconvolution and peak list alignment. Each analysis step introduces a certain degree of technical variation in the abundance levels (i.e. peak areas) of those molecules. Some analysis steps introduce technical variations that affect the peak areas of all molecules equally while others affect the peak areas of a subset of molecules with varying degrees. To correct these technical variations, some existing normalization methods simply scale the peak areas of all molecules ...


Acceleration Of K-Nearest Neighbor And Srad Algorithms Using Intel Fpga Sdk For Opencl, Liyuan Liu Mar 2018

Acceleration Of K-Nearest Neighbor And Srad Algorithms Using Intel Fpga Sdk For Opencl, Liyuan Liu

Electronic Theses and Dissertations

Field Programmable Gate Arrays (FPGAs) have been widely used for accelerating machine learning algorithms. However, the high design cost and time for implementing FPGA-based accelerators using traditional HDL-based design methodologies has discouraged users from designing FPGA-based accelerators. In recent years, a new CAD tool called Intel FPGA SDK for OpenCL (IFSO) allowed fast and efficient design of FPGA-based hardware accelerators from high level specification such as OpenCL. Even software engineers with basic hardware design knowledge could design FPGA-based accelerators. In this thesis, IFSO has been used to explore acceleration of k-Nearest-Neighbour (kNN) algorithm and Speckle Reducing Anisotropic Diffusion (SRAD) simulation ...


Optimized Multilayer Perceptron With Dynamic Learning Rate To Classify Breast Microwave Tomography Image, Chulwoo Pack Jan 2017

Optimized Multilayer Perceptron With Dynamic Learning Rate To Classify Breast Microwave Tomography Image, Chulwoo Pack

Electronic Theses and Dissertations

Most recently developed Computer Aided Diagnosis (CAD) systems and their related research is based on medical images that are usually obtained through conventional imaging techniques such as Magnetic Resonance Imaging (MRI), x-ray mammography, and ultrasound. With the development of a new imaging technology called Microwave Tomography Imaging (MTI), it has become inevitable to develop a CAD system that can show promising performance using new format of data. The platform can have a flexibility on its input by adopting Artificial Neural Network (ANN) as a classifier. Among the various phases of CAD system, we have focused on optimizing the classification phase ...