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Biomedical Engineering and Bioengineering Commons™
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Articles 1 - 30 of 194
Full-Text Articles in Biomedical Engineering and Bioengineering
Development And Evaluation Of A Connective Tissue Phantom Model For Subsurface Visualization Of Cancers Requiring Wide Local Excision, Kimberly S. Samkoe, Brent D. Bates, Niki N. Tselepidakis, Alisha V. Dsouza, Jason R. Gunn, Dipak B. Ramkumar, Keith D. Paulsen, Brian W. Pogue, Eric R. Henderson
Development And Evaluation Of A Connective Tissue Phantom Model For Subsurface Visualization Of Cancers Requiring Wide Local Excision, Kimberly S. Samkoe, Brent D. Bates, Niki N. Tselepidakis, Alisha V. Dsouza, Jason R. Gunn, Dipak B. Ramkumar, Keith D. Paulsen, Brian W. Pogue, Eric R. Henderson
Dartmouth Scholarship
Wide local excision (WLE) of tumors with negative margins remains a challenge because surgeons cannot directly visualize the mass. Fluorescence-guided surgery (FGS) may improve surgical accuracy; however, conventional methods with direct surface tumor visualization are not immediately applicable, and properties of tissues surrounding the cancer must be considered. We developed a phantom model for sarcoma resection with the near-infrared fluorophore IRDye 800CW and used it to iteratively define the properties of connective tissues that typically surround sarcoma tumors. We then tested the ability of a blinded surgeon to resect fluorescent tumor-simulating inclusions with ∼1-cm margins using predetermined target fluorescence intensities …
Subject-Independent Emotion Recognition Based On Physiological Signals: A Three-Stage Decision Method, Jing Chen, Bin Hu, Yue Wang, Philip Moore, Yongqiang Dai, Lei Feng, Zhijie Ding
Subject-Independent Emotion Recognition Based On Physiological Signals: A Three-Stage Decision Method, Jing Chen, Bin Hu, Yue Wang, Philip Moore, Yongqiang Dai, Lei Feng, Zhijie Ding
Biomedical Engineering Faculty Publications
Background: Collaboration between humans and computers has become pervasive and ubiquitous, however current computer systems are limited in that they fail to address the emotional component. An accurate understanding of human emotions is necessary for these computers to trigger proper feedback. Among multiple emotional channels, physiological signals are synchronous with emotional responses; therefore, analyzing physiological changes is a recognized way to estimate human emotions. In this paper, a three-stage decision method is proposed to recognize four emotions based on physiological signals in the multi-subject context. Emotion detection is achieved by using a stage-divided strategy in which each stage deals with …
Biomechanical Tolerance Of Whole Lumbar Spines In Straightened Posture Subjected To Axial Acceleration, Brian D. Stemper, Sajal Chirvi, Ninh Doan, Jamie L. Baisden, Dennis J. Maiman, William H. Curry, Narayan Yoganandan, Frank A. Pintar, Glenn Paskoff, Barry S. Shender
Biomechanical Tolerance Of Whole Lumbar Spines In Straightened Posture Subjected To Axial Acceleration, Brian D. Stemper, Sajal Chirvi, Ninh Doan, Jamie L. Baisden, Dennis J. Maiman, William H. Curry, Narayan Yoganandan, Frank A. Pintar, Glenn Paskoff, Barry S. Shender
Biomedical Engineering Faculty Research and Publications
Quantification of biomechanical tolerance is necessary for injury prediction and protection of vehicular occupants. This study experimentally quantified lumbar spine axial tolerance during accelerative environments simulating a variety of military and civilian scenarios. Intact human lumbar spines (T12‐L5) were dynamically loaded using a custom‐built drop tower. Twenty‐three specimens were tested at sub‐failure and failure levels consisting of peak axial forces between 2.6 and 7.9 kN and corresponding peak accelerations between 7 and 57 g. Military aircraft ejection and helicopter crashes fall within these high axial acceleration ranges. Testing was stopped following injury detection. Both peak force and acceleration were significant …
Optimizing Filter-Probe Diffusion Weighting In The Rat Spinal Cord For Human Translation, Matthew D. Budde, Nathan P. Skinner, L. Tugan Muftuler, Brian D. Schmit, Shekar N. Kurpad
Optimizing Filter-Probe Diffusion Weighting In The Rat Spinal Cord For Human Translation, Matthew D. Budde, Nathan P. Skinner, L. Tugan Muftuler, Brian D. Schmit, Shekar N. Kurpad
Biomedical Engineering Faculty Research and Publications
No abstract provided.
Brain Motion, Deformation, And Potential Injury During Soccer Heading, Charles F. Babbs
Brain Motion, Deformation, And Potential Injury During Soccer Heading, Charles F. Babbs
Weldon School of Biomedical Engineering Faculty Working Papers
This paper addresses the problem of what is happening physically inside the skull during head-ball contact. Mathematical models based upon Newton’s laws of motion and numerical methods are used to create animations of brain motion and deformation inside the skull.
Initially a 1 cm gap filled with cerebrospinal fluid (CSF) separates the brain from the rigid skull in adults and older children. Whole head acceleration induces a pulse of artificial gravity within the skull. Because brain density differs slightly from that of CSF, the brain accelerates and strikes the inner aspect of the skull, undergoing viscoelastic deformation, ranging from 1 …
Association Between Left Ventricular Mechanics And Diffuse Myocardial Fibrosis In Patients With Repaired Tetralogy Of Fallot: A Cross-Sectional Study, Christopher M. Haggerty, Jonathan D. Suever, Arichanah Pulenthiran, Abba Mejia-Spiegeler, Gregory J. Wehner, Linyuan Jing, Richard J. Charnigo, Brandon K. Fornwalt, Mark A. Fogel
Association Between Left Ventricular Mechanics And Diffuse Myocardial Fibrosis In Patients With Repaired Tetralogy Of Fallot: A Cross-Sectional Study, Christopher M. Haggerty, Jonathan D. Suever, Arichanah Pulenthiran, Abba Mejia-Spiegeler, Gregory J. Wehner, Linyuan Jing, Richard J. Charnigo, Brandon K. Fornwalt, Mark A. Fogel
Biomedical Engineering Faculty Publications
Background: Patients with repaired tetralogy of Fallot (TOF) have progressive, adverse biventricular remodeling, leading to abnormal contractile mechanics. Defining the mechanisms underlying this dysfunction, such as diffuse myocardial fibrosis, may provide insights into poor long-term outcomes. We hypothesized that left ventricular (LV) diffuse fibrosis is related to impaired LV mechanics.
Methods: Patients with TOF were evaluated with cardiac magnetic resonance in which modified Look-Locker (MOLLI) T1-mapping and spiral cine Displacement encoding (DENSE) sequences were acquired at three LV short-axis positions. Linear mixed modeling was used to define the association between regional LV mechanics from DENSE based on regional T1-derived diffuse …
Nanostructured Apatite-Mullite Glass-Ceramics For Enhanced Primary Human Osteoblast Cell Response, Gordon Cooke, Conor Dunne, Sarah Keane, Daithi De Faoite, Seamas Donnelly, Kenneth Stanton
Nanostructured Apatite-Mullite Glass-Ceramics For Enhanced Primary Human Osteoblast Cell Response, Gordon Cooke, Conor Dunne, Sarah Keane, Daithi De Faoite, Seamas Donnelly, Kenneth Stanton
Articles
This work investigates the difference in viability of primary human foetal osteoblast cells on a glass-ceramic surface with nanoscale topography relative to viability on a smooth glass-ceramic surface containing a bioactive phase. Apatite-mullite glass-ceramics containing bioactive fluorapatite (Ca10(PO4)6F2) and bioinert mullite (Si2Al6O13) were synthesised and subsequent heat-treatment was optimised to form nano-sized fluorapatite crystals. Etching was used to selectively remove the bioactive phase, producing a surface with disordered nanoscale topography. Cells were seeded onto a smooth polished glass-ceramic substrate with the bioactive phase intact, an etched …
Reducing Biomass Recalcitrance By Heterologous Expression Of A Bacterial Peroxidase In Tobacco (Nicotiana Benthamiana), Ayalew Ligaba-Osena, Bertrand Hankoua, Kay Dimarco, Robert Pace, Mark Crocker, Jesse Mcatee, Nivedita Nagachar, Ming Tien, Tom L. Richard
Reducing Biomass Recalcitrance By Heterologous Expression Of A Bacterial Peroxidase In Tobacco (Nicotiana Benthamiana), Ayalew Ligaba-Osena, Bertrand Hankoua, Kay Dimarco, Robert Pace, Mark Crocker, Jesse Mcatee, Nivedita Nagachar, Ming Tien, Tom L. Richard
Center for Applied Energy Research Faculty and Staff Publications
Commercial scale production of biofuels from lignocellulosic feed stocks has been hampered by the resistance of plant cell walls to enzymatic conversion, primarily owing to lignin. This study investigated whether DypB, the lignin-degrading peroxidase from Rodococcus jostii, depolymerizes lignin and reduces recalcitrance in transgenic tobacco (Nicotiana benthamiana). The protein was targeted to the cytosol or the ER using ER-targeting and retention signal peptides. For each construct, five independent transgenic lines were characterized phenotypically and genotypically. Our findings reveal that expression of DypB in the cytosol and ER does not affect plant development. ER-targeting increased protein accumulation, and …
Synthesis Of Regioselectively Acylated Quercetin Analogues With Improved Antiplatelet Activity, Yu Duan, Na Sun, Min Xue, Xiaolan Wang, Hu Yang
Synthesis Of Regioselectively Acylated Quercetin Analogues With Improved Antiplatelet Activity, Yu Duan, Na Sun, Min Xue, Xiaolan Wang, Hu Yang
Chemical and Biochemical Engineering Faculty Research & Creative Works
The aim of the present study was to report on a complete synthetic approach, namely benzylation-hydrolysis-acylation-hydrogenation, to the synthesis of regioselectively acylated quercetin analogues using low-cost rutin as a starting material. Three quercetin analogues, quercetin-3-O-propionate (Q-pr), quercetin-3-O-butyrate (Q-bu) and quercetin-3-O-valerate (Q-va), containing 3-, 4- and 5-carbon aliphatic acyl chains, respectively, were synthesized and characterized with 1H nuclear magnetic resonance (NMR), 13C NMR and mass spectrometry. Compared with quercetin, all three analogues exhibited improved lipophilicity. The lipophilicity of the analogue increased with increasing acyl chain length. Q-va exhibited the highest lipophilicity among the three analogues, but a lower water …
Blue-Light Induced Biosynthesis Of Ros Contributes To The Signaling Mechanism Of Arabidopsis Cryptochrome, Mohamed A. El-Esawi, Louis David Arthaut, Nathalie Jourdan, Alain D'Harlingue, Justin J. Link, Margaret Ahmad, Carlos F. Martino
Blue-Light Induced Biosynthesis Of Ros Contributes To The Signaling Mechanism Of Arabidopsis Cryptochrome, Mohamed A. El-Esawi, Louis David Arthaut, Nathalie Jourdan, Alain D'Harlingue, Justin J. Link, Margaret Ahmad, Carlos F. Martino
Biomedical Engineering and Sciences Faculty Publications
Cryptochromes are evolutionarily conserved blue light receptors with many roles throughout plant growth and development. They undergo conformational changes in response to light enabling interaction with multiple downstream signaling partners. Recently, it has been shown that cryptochromes also synthesize reactive oxygen species (ROS) in response to light, suggesting the possibility of an alternate signaling mechanism. Here we show by fluorescence imaging and microscopy that H202 and ROS accumulate in the plant nucleus after cryptochrome activation. They induce ROS-regulated transcripts including for genes implicated in pathogen defense, biotic and abiotic stress. Mutant cryptochrome alleles that are non-functional in photomorphogenesis retain the …
Implantation Of Nanocellulose In The Zebrafish Model, Hanna J. Anderson
Implantation Of Nanocellulose In The Zebrafish Model, Hanna J. Anderson
Honors College
The number of novel materials for use in biomedical implantation is expanding rapidly, increasing the success rates of implant procedures. Nanocellulose is being assessed as a sustainable and biocompatible material, offering an alternative to conventional polymer or metal designs with the appropriate structure for potential tissue integration. In this research, the capacity of cellulose nanofibers to serve as biomedical implants is assessed through examination of immune responses of transgenic zebrafish, utilizing bright field and confocal fluorescence microscopy. Methods for creating microincisions for the implantation of dense cellulose nanofiber shards in the zebrafish model were explored, and a surgical protocol was …
The Temporal Expression Of Adipokines During Spinal Fusion, Sohrab Virk, Alicia L. Bertone, Hayam Hamaz Hussein, Jeffrey M. Toth, Mari Kaido, Safdar Khan
The Temporal Expression Of Adipokines During Spinal Fusion, Sohrab Virk, Alicia L. Bertone, Hayam Hamaz Hussein, Jeffrey M. Toth, Mari Kaido, Safdar Khan
Biomedical Engineering Faculty Research and Publications
Background Context
Adipokines are secreted by white adipose tissue and have been associated with fracture healing. Our goal was to report the temporal expression of adipokines during spinal fusion in an established rabbit model.
Purpose
Our goal was to report the temporal expression of adipokines during spinal fusion in an established rabbit model.
Study Design
The study design included a laboratory animal model.
Methods
New Zealand white rabbits were assigned to either sham surgery (n=2), unilateral posterior spinal fusion (n=14), or bilateral posterior spinal fusion (n=14). Rabbits were euthanized 1–6 and 10 weeks out from surgery. Fusion was evaluated by …
A Gal-Ms Device To Evaluate Cell Migratory Response To Combined Galvano-Chemotactic Fields, Shawn Mishra, Maribel Vazquez
A Gal-Ms Device To Evaluate Cell Migratory Response To Combined Galvano-Chemotactic Fields, Shawn Mishra, Maribel Vazquez
Publications and Research
Electric fields have been studied extensively in biomedical engineering (BME) for numerous regenerative therapies. Recent studies have begun to examine the biological effects of electric fields in combination with other environmental cues, such as tissue-engineered extracellular matrices (ECM), chemical gradient profiles, and time-dependent temperature gradients. In the nervous system, cell migration driven by electrical fields, or galvanotaxis, has been most recently studied in transcranial direct stimulation (TCDS), spinal cord repair and tumor treating fields (TTF). The cell migratory response to galvano-combinatory fields, such as magnetic fields, chemical gradients, or heat shock, has only recently been explored. In the visual system, …
Targeting The Bacterial Orisome In The Search For New Antibiotics, Julia E. Grimwade, Alan C. Leonard
Targeting The Bacterial Orisome In The Search For New Antibiotics, Julia E. Grimwade, Alan C. Leonard
Biomedical Engineering and Sciences Faculty Publications
There is an urgent need for new antibiotics to combat drug resistant bacteria. Existing antibiotics act on only a small number of proteins and pathways in bacterial cells, and it seems logical that expansion of the target set could lead to development of novel antimicrobial agents. One essential process, not yet exploited for antibiotic discovery, is the initiation stage of chromosome replication, mediated by the bacterial orisome. In all bacteria, orisomes assemble when the initiator protein, DnaA, as well as accessory proteins, bind to a DNA scaffold called the origin of replication (oriC). Orisomes perform the essential tasks of unwinding …
Ambulatory Systolic Blood Pressure And Obesity Are Independently Associated With Left Ventricular Hypertrophic Remodeling In Children, Linyuan Jing, Christopher D. Nevius, Cassi M. Friday, Jonathan D. Suever, Arichanah Pulenthiran, Abba Mejia-Spiegeler, H. Lester Kirchner, William J. Cochran, Gregory J. Wehner, Aftab S. Chishti, Christopher M. Haggerty, Brandon K. Fornwalt
Ambulatory Systolic Blood Pressure And Obesity Are Independently Associated With Left Ventricular Hypertrophic Remodeling In Children, Linyuan Jing, Christopher D. Nevius, Cassi M. Friday, Jonathan D. Suever, Arichanah Pulenthiran, Abba Mejia-Spiegeler, H. Lester Kirchner, William J. Cochran, Gregory J. Wehner, Aftab S. Chishti, Christopher M. Haggerty, Brandon K. Fornwalt
Biomedical Engineering Faculty Publications
Background: Children with obesity have hypertrophic cardiac remodeling. Hypertension is common in pediatric obesity, and may independently contribute to hypertrophy. We hypothesized that both the degree of obesity and ambulatory blood pressure (ABP) would independently associate with measures of hypertrophic cardiac remodeling in children.
Methods: Children, aged 8–17 years, prospectively underwent cardiovascular magnetic resonance (CMR) and ABP monitoring. Left ventricular (LV) mass indexed to height2.7(LVMI), myocardial thickness and end-diastolic volume were quantified from a 3D LV model reconstructed from cine balanced steady state free precession images. Categories of remodeling were determined based on cutoff values for LVMI and …
Computational Sensitivity Investigation Of Hydrogel Injection Characteristics For Myocardial Support, Hua Wang, Christopher B. Rodell, Madonna E. Lee, Neville N. Dusaj, Joseph H. Gorman Iii, Jason A. Burdick, Robert C. Gorman, Jonathan F. Wenk
Computational Sensitivity Investigation Of Hydrogel Injection Characteristics For Myocardial Support, Hua Wang, Christopher B. Rodell, Madonna E. Lee, Neville N. Dusaj, Joseph H. Gorman Iii, Jason A. Burdick, Robert C. Gorman, Jonathan F. Wenk
Mechanical Engineering Faculty Publications
Biomaterial injection is a potential new therapy for augmenting ventricular mechanics after myocardial infarction (MI). Recent in vivo studies have demonstrated that hydrogel injections can mitigate the adverse remodeling due to MI. More importantly, the material properties of these injections influence the efficacy of the therapy. The goal of the current study is to explore the interrelated effects of injection stiffness and injection volume on diastolic ventricular wall stress and thickness. To achieve this, finite element models were constructed with different hydrogel injection volumes (150 µL and 300 µL), where the modulus was assessed over a range of 0.1 kPa …
Macroscopic Anisotropic Bone Material Properties In Children With Severe Osteogenesis Imperfecta, Carolyne Albert, John Jameson, Sergey Tarima, Peter Smith, Gerald Harris
Macroscopic Anisotropic Bone Material Properties In Children With Severe Osteogenesis Imperfecta, Carolyne Albert, John Jameson, Sergey Tarima, Peter Smith, Gerald Harris
Biomedical Engineering Faculty Research and Publications
Children with severe osteogenesis imperfecta(OI) typically experience numerous fractures and progressive skeletal deformities over their lifetime. Recent studies proposed finite element models to assess fracture risk and guide clinicians in determining appropriate intervention in children with OI, but lack of appropriate material property inputs remains a challenge. This study aimed to characterize macroscopic anisotropic cortical bone material properties and investigate relationships with bone density measures in children with severe OI. Specimens were obtained from tibial or femoral shafts of nine children with severe OI and five controls. The specimens were cut into beams, characterized in bending, and imaged by synchrotron …
Hydrodeoxygenation Of Acetic Acid As A Model Compound For The Aqueous Phase Catalytic Pyrolysis Oils, Hossein Jahromi, Foster Agblevor
Hydrodeoxygenation Of Acetic Acid As A Model Compound For The Aqueous Phase Catalytic Pyrolysis Oils, Hossein Jahromi, Foster Agblevor
Biological Engineering Faculty Publications
Catalytic pyrolysis of biomass generates organic, aqueous, gaseous and solid fractions. The organic fraction can be easily hydrotreated to produce hydrocarbons, but the aqueous phase that contains between 10 to 25% soluble organics can pose challenges in wastewater treatment. The aqueous fraction from the catalytic pyrolysis of Pinyon Juniper wood was characterized for its organic content. The fraction contained about 15 wt% organic compounds determined from Karl Fischer analysis. The organic fractions were further characterized using gas chromatography and mass selective detection (GC/MS). The analysis showed that the dissolved organics were composed of acetic acid, ketones, aldehydes, and phenolic compounds. …
Optimal Hemoglobin Extinction Coefficient Data Set For Near-Infrared Spectroscopy, Yue Zhao, Lina Qiu, Yunlong Sun, Chong Huang, Ting Li
Optimal Hemoglobin Extinction Coefficient Data Set For Near-Infrared Spectroscopy, Yue Zhao, Lina Qiu, Yunlong Sun, Chong Huang, Ting Li
Biomedical Engineering Faculty Publications
Extinction coefficient (ε) is a critical parameter for quantification of oxy-, deoxy-, and total-hemoglobin concentrations (Δ[HbO2], Δ[Hb], Δ[tHb]) from optical measurements of Near-infrared spectroscopy (NIRS). There are several different ε data sets which were frequently used in NIRS quantification. A previous study reported that even a small variation in ε could cause a significant difference in hemodynamic measurements. Apparently the selection of an optimal ε data set is important for NIRS. We conducted oxygen-state-varied and blood-concentration-varied model experiments with 57 human blood samples to mimic tissue hemodynamic variations. Seven reported ε data sets were evaluated by comparisons between …
Robotic Resistance Treadmill Training Improves Locomotor Function In Children With Cerebral Palsy: A Randomized Controlled Pilot Study, Ming Wu, Janis Kim, Deborah J. Gaebler-Spira, Brian D. Schmit, Pooja Arora
Robotic Resistance Treadmill Training Improves Locomotor Function In Children With Cerebral Palsy: A Randomized Controlled Pilot Study, Ming Wu, Janis Kim, Deborah J. Gaebler-Spira, Brian D. Schmit, Pooja Arora
Biomedical Engineering Faculty Research and Publications
Objective
To determine whether applying controlled resistance forces to the legs during the swing phase of gait may improve the efficacy of treadmill training as compared with applying controlled assistance forces in children with cerebral palsy (CP).
Design
Randomized controlled study.
Setting
Research unit of a rehabilitation hospital.
Participants
Children with spastic CP (N=23; mean age, 10.6y; range, 6–14y; Gross Motor Function Classification System levels, I–IV).
Interventions
Participants were randomly assigned to receive controlled assistance (n=11) or resistance (n=12) loads applied to the legs at the ankle. Participants underwent robotic treadmill training 3 times a week for 6 weeks (18 …
Sagittal Subtalar And Talocrural Joint Assessment During Ambulation With Controlled Ankle Movement (Cam) Boots, Ben Mchenry, Emily L. Exten, Janelle A. Cross, Karen M. Kruger, Brian Law, Jessica M. Fritz, Gerald F. Harris
Sagittal Subtalar And Talocrural Joint Assessment During Ambulation With Controlled Ankle Movement (Cam) Boots, Ben Mchenry, Emily L. Exten, Janelle A. Cross, Karen M. Kruger, Brian Law, Jessica M. Fritz, Gerald F. Harris
Biomedical Engineering Faculty Research and Publications
Background: The purpose of the current study was to determine sagittal plane talocrural and subtalar kinematic differences between barefoot and controlled ankle movement (CAM) boot walking. This study used fluoroscopic images to determine talar motion relative to tibia and calcaneal motion relative to talus.
Methods: Fourteen male subjects (mean age 24.1 ± 3.5 years) screened for normal gait were tested. A fluoroscopy unit was used to collect images at 200 Hz during stance. Sagittal motion of the talocrural and subtalar joints were analyzed barefoot and within short and tall CAM boots.
Results: Barefoot talocrural mean maximum plantar and dorsiflexion were …
Optical Properties Of Organic Carbon And Soot Produced In An Inverse Diffusion Flame, C. Russo, B. Apicella, J. S. Lighty, A. Ciajolo, A. Tregrossi
Optical Properties Of Organic Carbon And Soot Produced In An Inverse Diffusion Flame, C. Russo, B. Apicella, J. S. Lighty, A. Ciajolo, A. Tregrossi
Mechanical and Biomedical Engineering Faculty Publications and Presentations
The carbonaceous matter (soot plus organic carbon) sampled downstream of an ethylene inverse diffusion flame (IDF) was chemically and spectroscopically analyzed in detail. In particular, the H/C ratio, the UV-Visible absorption coefficient and Raman parameters were measured and found to be representative of a highly disordered sp2 -rich carbon as the early soot sampled in a premixed flame. In contrast, the optical band gap was found to be relatively low (0.7eV), closer to the optical band gap of graphite than to that of medium-sized polycyclic aromatic hydrocarbons (>2eV) which are widely considered to be soot precursors and are …
Pattern Discovery In Brain Imaging Genetics Via Scca Modeling With A Generic Non-Convex Penalty, Lei Du, Kefei Liu, Xiaohui Yao, Jingwen Yan, Shannon L. Risacher, Junwei Han, Lei Guo, Andrew J. Saykin, Li Shen, Michael W. Weiner, Paul Aisen, Ronald Petersen, Clifford R. Jack, William Jagust, John Q. Trojanowki, Arthur W. Toga, Laurel Beckett, Robert C. Green, John Morris, Leslie M. Shaw, Zaven Khachaturian, Greg Sorensen, Maria Carrillo, Lew Kuller, Marc Raichle, Steven Paul, Peter Davies, Howard Fillit, Franz Hefti, David Holtzman, Charles D. Smith, Gregory Jicha, Peter A. Hardy, Partha Sinha, Elizabeth Oates, Gary Conrad
Pattern Discovery In Brain Imaging Genetics Via Scca Modeling With A Generic Non-Convex Penalty, Lei Du, Kefei Liu, Xiaohui Yao, Jingwen Yan, Shannon L. Risacher, Junwei Han, Lei Guo, Andrew J. Saykin, Li Shen, Michael W. Weiner, Paul Aisen, Ronald Petersen, Clifford R. Jack, William Jagust, John Q. Trojanowki, Arthur W. Toga, Laurel Beckett, Robert C. Green, John Morris, Leslie M. Shaw, Zaven Khachaturian, Greg Sorensen, Maria Carrillo, Lew Kuller, Marc Raichle, Steven Paul, Peter Davies, Howard Fillit, Franz Hefti, David Holtzman, Charles D. Smith, Gregory Jicha, Peter A. Hardy, Partha Sinha, Elizabeth Oates, Gary Conrad
Neurology Faculty Publications
Brain imaging genetics intends to uncover associations between genetic markers and neuroimaging quantitative traits. Sparse canonical correlation analysis (SCCA) can discover bi-multivariate associations and select relevant features, and is becoming popular in imaging genetic studies. The L1-norm function is not only convex, but also singular at the origin, which is a necessary condition for sparsity. Thus most SCCA methods impose ℓ1-norm onto the individual feature or the structure level of features to pursuit corresponding sparsity. However, the ℓ1-norm penalty over-penalizes large coefficients and may incurs estimation bias. A number of non-convex penalties are proposed to reduce …
Decreased Triple Network Connectivity In Patients With Recent Onset Post-Traumatic Stress Disorder After A Single Prolonged Trauma Exposure, Yang Liu, Liang Li, Baojuan Li, Na Feng, Lihong Li, Xi Zhang, Hongbing Lu, Hong Yin
Decreased Triple Network Connectivity In Patients With Recent Onset Post-Traumatic Stress Disorder After A Single Prolonged Trauma Exposure, Yang Liu, Liang Li, Baojuan Li, Na Feng, Lihong Li, Xi Zhang, Hongbing Lu, Hong Yin
Publications and Research
The triple network model provides a common framework for understanding affective and neurocognitive dysfunctions across multiple disorders, including central executive network (CEN), default mode network (DMN), and salience network (SN). Considering the effect of traumatic experience on post-traumatic stress disorder (PTSD), this study aims to explore the alteration of triple network connectivity in a specific PTSD induced by a single prolonged trauma exposure. With an arterial spin labeling sequence, three networks were first identified using independent component analysis among 10 PTSD patients and 10 healthy survivors, who experienced the same coal mining flood disaster. Then, the triple network connectivity was …
Non-Linear Heart Rate And Blood Pressure Interaction In Response To Lower-Body Negative Pressure, Ajay K. Verma, Da Xu, Amanmeet Garg, Anita T. Cote, Andrew P. Blaber, Kouhyar Tavakolian
Non-Linear Heart Rate And Blood Pressure Interaction In Response To Lower-Body Negative Pressure, Ajay K. Verma, Da Xu, Amanmeet Garg, Anita T. Cote, Andrew P. Blaber, Kouhyar Tavakolian
Electrical Engineering Faculty Publications
Early detection of hemorrhage remains an open problem. In this regard, blood pressure has been an ineffective measure of blood loss due to numerous compensatory mechanisms sustaining arterial blood pressure homeostasis. Here, we investigate the feasibility of causality detection in the heart rate and blood pressure interaction, a closed-loop control system, for early detection of hemorrhage. The hemorrhage was simulated via graded lower-body negative pressure (LBNP) from 0 to -40 mmHg. The research hypothesis was that a significant elevation of causal control in the direction of blood pressure to heart rate (i.e., baroreflex response) is an early indicator of central …
Utilizing Functional Near-Infrared Spectroscopy For Prediction Of Cognitive Workload In Noisy Work Environments, Ryan Gabbard, Mary E. Fendley, Irfaan A. Dar, Rik Warren, Nasser H. Kashou
Utilizing Functional Near-Infrared Spectroscopy For Prediction Of Cognitive Workload In Noisy Work Environments, Ryan Gabbard, Mary E. Fendley, Irfaan A. Dar, Rik Warren, Nasser H. Kashou
Biomedical, Industrial & Human Factors Engineering Faculty Publications
Occupational noise frequently occurs in the work environment in military intelligence, surveillance, and reconnaissance operations. This impacts cognitive performance by acting as a stressor, potentially interfering with the analysts’ decision-making process. We investigated the effects of different noise stimuli on analysts’ performance and workload in anomaly detection by simulating a noisy work environment. We utilized functional near-infrared spectroscopy (fNIRS) to quantify oxy-hemoglobin (HbO) and deoxy-hemoglobin concentration changes in the prefrontal cortex (PFC), as well as behavioral measures, which include eye tracking, reaction time, and accuracy rate. We hypothesized that noisy environments would have a negative effect on the participant in …
Tuning Properties Of Poly(Ethylene Glycol)-Block-Poly(Simvastatin) Copolymers Synthesized Via Triazabicyclodecene, Theodora A. Asafo-Adjei, Thomas D. Dziubla, David A. Puleo
Tuning Properties Of Poly(Ethylene Glycol)-Block-Poly(Simvastatin) Copolymers Synthesized Via Triazabicyclodecene, Theodora A. Asafo-Adjei, Thomas D. Dziubla, David A. Puleo
Biomedical Engineering Faculty Publications
Simvastatin was polymerized into copolymers to better control drug loading and release for therapeutic delivery. When using the conventional stannous octoate catalyst in ring-opening polymerization (ROP), reaction temperatures ≥ 200 °C were required, which promoted uncontrollable and undesirable side reactions. Triazabicyclodecene (TBD), a highly reactive guanidine base organocatalyst, was used as an alternative to polymerize simvastatin. Polymerization was achieved at 150 °C using 5 kDa methyl-terminated poly(ethylene glycol) (mPEG) as the initiator. ROP reactions with 2 kDa or 550 Da mPEG initiators were also successful using TBD at 150 °C instead of stannous octoate, which required a higher reaction temperature. …
Multiscale Modeling Of Cardiovascular Flows, Alison Marsden, Ethan Kung
Multiscale Modeling Of Cardiovascular Flows, Alison Marsden, Ethan Kung
Publications
Simulations of blood flow in the cardiovascular system offer investigative and predictive capabilities to augment current clinical tools. Using image-based modeling, the Navier-Stokes equations can be solved to obtain detailed 3-dimensional hemodynamics in patient-specific anatomical models. Relevant parameters such as wall shear stress and particle residence times can then be calculated from the 3D results and correlated with clinical data for treatment planning and device evaluation. Reduced-order models such as open or closed loop 0D lumped-parameter models can simulate the dynamic behavior of the circulatory system using an analogy to electrical circuits. When coupled to 3D simulations as boundary conditions, …
Protection By Inhaled Hydrogen Therapy In A Rat Model Of Acute Lung Injury Can Be Tracked In Vivo Using Molecular Imaging, Said H. Audi, Elizabeth R. Jacobs, Xiao Zhang, Amadou K.S. Camara, Ming Zhao, Meetha M. Medhora, Benjamin Michael Rizzo, Anne V. Clough
Protection By Inhaled Hydrogen Therapy In A Rat Model Of Acute Lung Injury Can Be Tracked In Vivo Using Molecular Imaging, Said H. Audi, Elizabeth R. Jacobs, Xiao Zhang, Amadou K.S. Camara, Ming Zhao, Meetha M. Medhora, Benjamin Michael Rizzo, Anne V. Clough
Biomedical Engineering Faculty Research and Publications
Inhaled hydrogen gas (H2) provides protection in rat models of human acute lung injury (ALI). We previously reported that biomarker imaging can detect oxidative stress and endothelial cell death in vivo in a rat model of ALI. Our objective was to evaluate the ability of 99mTc-hexamethylpropyleneamineoxime (HMPAO) and 99mTc-duramycin to track the effectiveness of H2 therapy in vivo in the hyperoxia rat model of ALI. Rats were exposed to room air (normoxia), 98% O2 + 2% N2 (hyperoxia) or 98% O2 + 2% H2 (hyperoxia+H2) for up to 60 …
The Prospects Of Zinc As A Structural Material For Biodegradable Implants—A Review Paper, Galit Katarivas Levy, Jeremy Goldman, Eli Aghion
The Prospects Of Zinc As A Structural Material For Biodegradable Implants—A Review Paper, Galit Katarivas Levy, Jeremy Goldman, Eli Aghion
Michigan Tech Publications
In the last decade, iron and magnesium, both pure and alloyed, have been extensively studied as potential biodegradable metals for medical applications. However, broad experience with these material systems has uncovered critical limitations in terms of their suitability for clinical applications. Recently, zinc and zinc-based alloys have been proposed as new additions to the list of degradable metals and as promising alternatives to magnesium and iron. The main byproduct of zinc metal corrosion, Zn2+, is highly regulated within physiological systems and plays a critical role in numerous fundamental cellular processes. Zn2+ released from an implant may suppress …