Engineering Commons^™

Integrated Freestanding Single-Crystal Silicon Nanowires: Conductivity And Surface Treatment, Chung-Hoon Lee, Clark Ritz, Minghuang Huang, Michael Ziwisky, Robert Blise, Max Lagally

Electrical and Computer Engineering Faculty Research and Publications

Integrated freestanding single-crystal silicon nanowires with typical dimension of 100 nm × 100 nm × 5 µm are fabricated by conventional 1:1 optical lithography and wet chemical silicon etching. The fabrication procedure can lead to wafer-scale integration of silicon nanowires in arrays. The measured electrical transport characteristics of the silicon nanowires covered with/without SiO₂ support a model of Fermi level pinning near the conduction band. The I–V curves of the nanowires reveal a current carrier polarity reversal depending on Si–SiO₂ and Si–H bonds on the nanowire surfaces

Incorporating Feedback From Multiple Sensory Modalities Enhances Brain–Machine Interface Control, Aaron J. Suminski, Dennis C. Tkach, Andrew H. Fagg, Nicholas G. Hatsopoulos

Biomedical Engineering Faculty Research and Publications

The brain typically uses a rich supply of feedback from multiple sensory modalities to control movement in healthy individuals. In many individuals, these afferent pathways, as well as their efferent counterparts, are compromised by disease or injury resulting in significant impairments and reduced quality of life. Brain–machine interfaces (BMIs) offer the promise of recovered functionality to these individuals by allowing them to control a device using their thoughts. Most current BMI implementations use visual feedback for closed-loop control; however, it has been suggested that the inclusion of additional feedback modalities may lead to improvements in control. We demonstrate for the …

Correction To Mitochondrial Free [Ca2+] Increases During Atp/Adp Antiport And Adp Phosphorylation: Exploration Of Mechanisms, Johan Haumann, Ranjan K. Dash, David F. Stowe, Age D. Boelens, Daniel A. Beard, Amadou K.S. Camara

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Aortic Coarctation: Recent Developments In Experimental And Computational Methods To Assess Treatments For This Simple Condition, John F. Ladisa, Charles A. Taylor, Jeffrey A. Feinstein

Biomedical Engineering Faculty Research and Publications

Coarctation of the aorta (CoA) is often considered a relatively simple disease, but long-term outcomes suggest otherwise as life expectancies are decades less than in the average population and substantial morbidity often exists. What follows is an expanded version of collective work conducted by the authors' and numerous collaborators that was presented at the 1st International Conference on Computational Simulation in Congenital Heart Disease pertaining to recent advances for CoA. The work begins by focusing on what is known about blood flow, pressure and indices of wall shear stress (WSS) in patients with normal vascular anatomy from both clinical imaging …

Midwave Infrared Quantum Dot Avalanche Photodiode, David A. Ramirez, Jiayi Shao, Majeed M. Hayat, Sanjay Krishna

Electrical and Computer Engineering Faculty Research and Publications

We report the first demonstration of a GaAs based avalanche photodiode (APD) operating in the midwave infrared region . In the device, called the quantum dot avalanche photodiode, an intersubband quantum dots-in-a-well detector is coupled with an APD through a tunnel barrier. Using this approach, we have increased the photocurrent and reached a conversion efficiency of 12%, which is one of the highest reported conversion efficiencies for any quantum dot detector.

The Cd-Te Phase Diagram, Robert F. Brebrick

Mechanical Engineering Faculty Research and Publications

The properties of the liquid phase in the Cd–Te system are fit using thermodynamic properties of CdTe(c) recently optimized by the author. These include a high temperature heat capacity significantly lower than commonly used such that the enthalpy of formation of CdTe(c) at its melting point is about 10 kJ/mol less negative than previously thought. An associated solution model with Cd, CdTe, and Te species is used. Seven adjustable parameters are sufficient to quantitatively fit the liquidus and partial pressures of Te₂ and Cd. Additional partial pressures for Te rich CdTe(c) near its melting point are extracted from an …

A Parallel Histogram-Based Particle Filter For Object Tracking On Simd-Based Smart Cameras, Henry Medeiros, Germán Holguín, Paul J. Shin, Johnny Park

Electrical and Computer Engineering Faculty Research and Publications

We present a parallel implementation of a histogram-based particle filter for object tracking on smart cameras based on SIMD processors. We specifically focus on parallel computation of the particle weights and parallel construction of the feature histograms since these are the major bottlenecks in standard implementations of histogram-based particle filters. The proposed algorithm can be applied with any histogram-based feature sets—we show in detail how the parallel particle filter can employ simple color histograms as well as more complex histograms of oriented gradients (HOG). The algorithm was successfully implemented on an SIMD processor and performs robust object tracking at up …

Distribution Of Capillary Transit Times In Isolated Lungs Of Oxygen-Tolerant Rats, Madhavi Ramakrishna, Zhuohui Gan, Anne V. Clough, Robert C. Molthen, David L. Roerig, Said H. Audi

Biomedical Engineering Faculty Research and Publications

Rats pre-exposed to 85% O₂ for 5–7 days tolerate the otherwise lethal effects of 100% O₂. The objective was to evaluate the effect of rat exposure to 85% O₂ for 7 days on lung capillary mean transit time (t¯c) and distribution of capillary transit times (h _c(t)). This information is important for subsequent evaluation of the effect of this hyperoxia model on the redox metabolic functions of the pulmonary capillary endothelium. The venous concentration vs. time outflow curves of fluorescein isothiocyanate labeled dextran (FITC-dex), an intravascular indicator, and coenzyme Q₁ hydroquinone …

Mas Pole Location And Effective Spatial Bandwidth Of The Scattered Field, James Richie

Electrical and Computer Engineering Faculty Research and Publications

The concept of effective spatial bandwidth (EBW) is introduced for periodic domains. The EBW is applied to the incident and scattered fields along the boundary of an infinite circular cylinder. The scattered field is formulated using the method of auxiliary sources (MAS). In MAS, monopoles on an auxiliary surface (AS) are used to model the scattered field. It is shown that the EBW of the incident field can provide some insight regarding the placement of poles for the MAS scattered field model. Example simulations are provided to demonstrate the usefulness of EBW with respect to monopole placement rules in MAS.

Geometrical Optimization Of Resonant Cantilevers Vibrating In In-Plane Bending Modes, Luke A. Beardslee, Assim M. Addous, Kemal S. Demirci, Oliver Brand, Stephen M. Heinrich, Fabien Josse

Civil and Environmental Engineering Faculty Research and Publications

The influence of the beam geometry on the quality factor and resonance frequency of resonant silicon cantilever beams vibrating in their fundamental in-plane flexural mode has been investigated in air and water. Compared to cantilevers vibrating in their out-of-plane flexural mode, utilizing the in plane mode results in reduced damping and reduced mass loading by the surrounding fluid. Quality factors as high as 4,300 in air and 67 in water have been measured for cantilevers with a 12 μm thick silicon layer. This is in comparison to Q factors up to 1,500 in air and up to 20 in water …

An Analytical Model Of A Thermally Excited Microcantilever Vibrating Laterally In A Viscous Fluid, Stephen M. Heinrich, Rabin Maharjan, Isabelle Dufour, Fabien Josse, Luke A. Beardslee, Oliver Brand

Civil and Environmental Engineering Faculty Research and Publications

To achieve higher quality factors (Q) for microcantilevers used in liquid-phase sensing applications, recent studies have explored the use of the lateral (in-plane) flexural mode. In particular, we have recently shown that this mode may be excited electrothermally using integrated heating resistors near the micro cantilever support, and that the resulting increase in Q helps to make low-ppb limits of detection a possibility in liquids. However, because the use of electrothermally excited, liquid-phase, microcantilever-based sensors in lateral flexure is relatively new, theoretical models are lacking. Therefore, we present here a new analytical model for predicting the vibratory response of these …

Maximizing Service Reliability In Distributed Computing Systems With Random Node Failures: Theory And Implementation, Jorge E. Pezoa, Sagar Dhakal, Majeed M. Hayat

Electrical and Computer Engineering Faculty Research and Publications

In distributed computing systems (DCSs) where server nodes can fail permanently with nonzero probability, the system performance can be assessed by means of the service reliability, defined as the probability of serving all the tasks queued in the DCS before all the nodes fail. This paper presents a rigorous probabilistic framework to analytically characterize the service reliability of a DCS in the presence of communication uncertainties and stochastic topological changes due to node deletions. The framework considers a system composed of heterogeneous nodes with stochastic service and failure times and a communication network imposing random tangible delays. The framework also …

Cluster-Based Distributed Face Tracking In Camera Networks, Josiah Yoder, Henry Medeiros, Johnny Park, Avinash Kak

Electrical and Computer Engineering Faculty Research and Publications

In this paper, we present a distributed multicamera face tracking system suitable for large wired camera networks. Unlike previous multicamera face tracking systems, our system does not require a central server to coordinate the entire tracking effort. Instead, an efficient camera clustering protocol is used to dynamically form groups of cameras for in-network tracking of individual faces. The clustering protocol includes cluster propagation mechanisms that allow the computational load of face tracking to be transferred to different cameras as the target objects move. Furthermore, the dynamic election of cluster leaders provides robustness against system failures. Our experimental results show that …

Evaluation Of Runoff Response To Moving Rainstorms, Jin Liang

Dissertations (1934 -)

The primary hypothesis from the hydrological literature is that downstream moving storms with storm length (Ls) less than watershed length (Lc) magnify the peak discharges. This hypothesis was developed from the kinematic-wave modeling, and was evaluated in a plot between the dimensionless peak discharge and dimensionless storm velocity. Previously unpublished experimental data collected from the Watershed Experimentation System (WES), obtained from the late Professor Ben C. Yen at the University of Illinois at Urbana-Champaign, were used in comparison with the simulation results of the kinematic-wave model. It is found that downstream moving storms with Ls/Lc <1 increase the peak discharges to a limited extent compared to stationary storms, but the kinematic-wave model overstates the increase in the peak flows resulting from downstream moving storms with Ls/Lc <1. This difference between model projections and laboratory data was attributed to backwater effects in the experimental runoff.

To evaluate the importance of …

Ankle Strength And Functional Limitations In Children And Adolescents With Type I Osteogenesis Imperfecta, Angela Caudill, Ann Flanagan, Sahar Hassani, Adam Graf, Ruta Bajorunaite, Gerald F. Harris, Peter A. Smith

Biomedical Engineering Faculty Research and Publications

Purpose: To determine whether children with type I osteogenesis imperfecta (OI) exhibit ankle plantar flexor weakness and whether this correlates with physical function.

Methods: Twenty children and adolescents with type I OI and 20 age-matched controls (age 6-18 years) participated in a single evaluation session. Data included strength assessment, Gillette Functional Assessment Questionnaire, Pediatric Outcome Data Collection Instrument (PODCI), and Faces Pain Scale—Revised.

Results: Ankle plantar flexor weakness was evident in the OI group compared with the control group. Heel-rise strength correlated with ankle isometric plantar flexion strength. Limitations in PODCI subscales—sports and physical function and pain/comfort—are present in the …

Risk-Based Seismic Design Optimization Of Steel Building Systems With Passive Damping Devices, Junshan Liu

Dissertations (1934 -)

Nonlinear time history analysis software and an optimization algorithm for automating design of steel frame buildings with and without supplemental passive damping systems using the risk- or performance-based seismic design philosophy are developed in this dissertation. The software package developed is suitable for conducting dynamic analysis of 2D steel framed structures modeled as shear buildings with linear/nonlinear viscous and viscoelastic dampers. Both single degree of freedom (SDOF) and multiple degree of freedom (multistory or MDOF) shear-building systems are considered to validate the nonlinear analysis engine developed. The response of both un-damped and damped structures using the 1940 EI Centro (Imperial …

Development Of A Unique Whole-Brain Model For Upper Extremity Neuroprosthetic Control, Dominic Nathan

Dissertations (1934 -)

Neuroprostheses are at the forefront of upper extremity function restoration. However, contemporary controllers of these neuroprostheses do not adequately address the natural brain strategies related to planning, execution and mediation of upper extremity movements. These lead to restrictions in providing complete and lasting restoration of function. This dissertation develops a novel whole-brain model of neuronal activation with the goal of providing a robust platform for an improved upper extremity neuroprosthetic controller. Experiments (N=36 total) used goal-oriented upper extremity movements with real-world objects in an MRI scanner while measuring brain activation during functional magnetic resonance imaging (fMRI). The resulting data was …

Detrimental Thoracoabdominal Interaction With Lateral Airbag Restraints, Jason John Hallman

Dissertations (1934 -)

Side impact motor vehicle crashes pose unique challenges for occupant protection, particularly with regard to torso injury mitigation. The minimal crush distance between the vehicle exterior and the occupant torso has necessitated advanced passive safety technologies in response to tightened regulatory requirements and increased public awareness of safety issues. In particular, lateral airbag restraints (side airbags) have undergone a rapid and unregulated introduction in recent years, with US availability increasing to over 90% of new vehicles in 2010. As with frontal airbag restraints, the prdissertationsity for injury to occupants in close proximity to side airbag deployment remains a concern. Test …

Analysis Of The Detection Of Organophosphate Pesticides In Aqueous Solutions Using Polymer-Coated Sh-Saw Devices, Arnold Kweku Mensah-Brown

Dissertations (1934 -)

Organophosphate pesticides (OPs) have been found as contaminants in surface and ground waters, soil, and agricultural products. Because OPs are toxic compounds, rapid detection/monitoring of OPs in groundwater is necessary to allow for real-time remediation. Detection of OPs in water has already been demonstrated using poly(epichlorohydrin) [PECH] and polyurethane as the sensing layers. However, the response times were relatively long, hindering real-time monitoring. In this work, a hybrid organic/inorganic chemically sensitive layer [bisphenol A-hexamethyltrisiloxane (BPA-HMTS)] that shows a high degree of partial selectivity for OPs is synthesized, characterized (in terms of the glass transition temperature, T_g, water stability, …

Bioaugmentation For Recovery Of Anaerobic Digesters Subjected To Organic Overload, Vaibhav Panjabrao Tale

Dissertations (1934 -)

Anaerobic digester upset due to organic overload is common and methods to reduce recovery time would be beneficial. One potential method is bioaugmentation, the addition of an external culture for performance improvement. Methanogenic community structure differs from digester to digester and there may exist a relation between specific methanogenic activity (SMA) and microbial community composition. The research presented herein tested whether there is a relationship between SMA and community structure. Also, the effectiveness of bioaugmentation was tested by hypothesizing that bioaugmenting with a methanogenic, propionate-degrading culture acclimated to small oxygen doses will help rapid recovery of organically overloaded digesters.

Fourteen …

Performance Evaluation Of Open Graded Base Course With Doweled And Non-Doweled Transverse Joints, Robert Schmitt, Samuel Owusu-Ababio, James Crovetti

Transportation Reports with the Wisconsin Department of Transportation

The objectives of this study were to investigate the performance of 20-year old doweled/non-doweled and dense-graded/permeable base test sections on three concrete pavement segments in Wisconsin: USH 18/151 in Iowa and Dane counties, STH 29 in Brown County, and USH 151 in Columbia and Dane Counties. Five pavement bases were placed including: dense graded, asphalt-stabilized permeable, cement-stabilized permeable, and untreated permeable having two gradation sizes.

USH 18/151 test sections had similar performance (PDI) for doweled unsealed pavement on dense and permeable base. Distresses common to all segments included slight to moderate distressed joints/cracks and slight transverse faulting. Asphalt-stabilized permeable base …

Online Drift Compensation For Chemical Sensors Using Estimation Theory, Thomas H. Wenzel, Arnold Kweku Mensah-Brown, Fabien Josse, Edwin E. Yaz

Electrical and Computer Engineering Faculty Research and Publications

Sensor drift from slowly changing environmental conditions and other instabilities can greatly degrade a chemical sensor's performance, resulting in poor identification and analyte quantification. In the present work, estimation theory (i.e., various forms of the Kalman filter) is used for online compensation of baseline drift in the response of chemical sensors. Two different cases, which depend on the knowledge of the characteristics of the sensor system, are studied. First, an unknown input is considered, which represents the practical case of analyte detection and quantification. Then, the more general case, in which the sensor parameters and the input are both unknown, …

Liquid-Phase Chemical Sensing Using Lateral Mode Resonant Cantilevers, Luke A. Beardslee, Kemal S. Demirci, Y. Luzinova, B. Mizaikoff, Stephen M. Heinrich, Fabien Josse, Oliver Brand

Civil and Environmental Engineering Faculty Research and Publications

Liquid-phase operation of resonant cantilevers vibrating in an out-of-plane flexural mode has to date been limited by the considerable fluid damping and the resulting low quality factors (Q factors). To reduce fluid damping in liquids and to improve the detection limit for liquid-phase sensing applications, resonant cantilever transducers vibrating in their in-plane rather than their out-of-plane flexural resonant mode have been fabricated and shown to have Q factors up to 67 in water (up to 4300 in air). In the present work, resonant cantilevers, thermally excited in an in-plane flexural mode, are investigated and applied as sensors for volatile …

Validation Of A Micro-Ct Approach For Characterization Of Murine And Human Bone In Osteogenesis Imperfecta, John Jameson, Brooke Slavens, Robert Molthen, Peter Smith, Gerald Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Passenger Car Equivalent Factors For Level Freeway Segments Operating Under Moderate And Congested Conditions, Umama Ahmed

Master's Theses (2009 -)

The significant impact Heavy Vehicles (HV) have on freeway operations has been identified since the first edition of the Highway Capacity Manual (HCM). The method of incorporating their impact in freeway capacity calculations has changed through the years. The HCM 2000 used Passenger Car Equivalent (PCE) values and percent of trucks/buses and Recreational Vehicles (RV) to account for HV effect on capacity. However PCE values in the most recent HCM edition rely on a limited field database and extensive simulation runs based on this information; they were calibrated on `steady-flow' traffic operations. The objective of this effort was to indentify …

Observer Incorporated Neoclassical Controller Design: A Discrete Perspective, Winston Alexander Baker

Master's Theses (2009 -)

Control theory has generally been divided into two categories, modern control and classical control. Modern control uses state feedback to alter the pole locations of a given system. Classical control uses pre-compensation to alter the zeroes of the system and uses output feedback to adjust the poles to bring stability to the system. The drawback is that the application of classical control techniques can be a lengthy, complicated and iterative design process and in the end, classical control techniques still do not give information about the state of the system. Neoclassical control combines classical control techniques with the state feedback …

Design And Validation Of An Mr Conditional Upper Extremity Evaluation System To Study Brain Activation Patterns After Stroke, Rubing Xu

Master's Theses (2009 -)

Stroke is the third leading cause of death and second most frequent cause of disability in the United States. Stroke rehabilitation methods have been developed to induce the cortical reorganization and motor-relearning that leads to stroke recovery. In this thesis, we designed and developed an MR conditional upper extremity reach and grasp movement evaluation system for the stroke survivors to study their kinematic performances in reach and grasp movement and the relationship between kinematic metrics and the recovery level measured by clinical assessment methods. We also applied the system into the functional MRI experiments to identify the ability to study …

Local Hemodynamic Changes Caused By Main Branch Stent Implantation And Subsequent Side Branch Balloon Angioplasty In A Representative Coronary Bifurcation, Andrew R. Williams, Bon-Kwon Koo, Timothy J. Gundert, Peter J. Fitzgerald, John F. Ladisa Jr.

Biomedical Engineering Faculty Research and Publications

Abnormal blood flow patterns promoting inflammation, cellular proliferation, and thrombosis may be established by local changes in vessel geometry after stent implantation in bifurcation lesions. Our objective was to quantify altered hemodynamics due to main vessel (MV) stenting and subsequent virtual side branch (SB) angioplasty in a coronary bifurcation by using computational fluid dynamics (CFD) analysis. CFD models were generated from representative vascular dimensions and intravascular ultrasound images. Time-averaged wall shear stress (TAWSS), oscillatory shear index (OSI), and fractional flow reserve (FFR) were quantified. None of the luminal surface was exposed to low TAWSS (/cm2) in the nondiseased bifurcation model. …

Determination Of Cap Model Parameters Using Numerical Optimization Method For Powder Compaction, Cong Lu

Dissertations (1934 -)

Many advantages are inherent to the successful powder metallurgy (P/M) process especially in high volume manufacturing. The strength/density distribution of the compacted product is crucial to overall success. The finite element analysis (FEA) method has become an effective way to numerically simulate strength/density distribution in a P/M compact. The modified Drucker-Prager cap (DPC) model has been shown to be a suitable constitutive relationship for metal powder compaction simulation. The calibration of the modified DPC model involves a procedure known as a triaxial compression test. Equipment for completing a triaxial compression test on metal powders is neither readily available nor standardized …

Mitochondrial Free [Ca2+] Increases During Atp/Adp Antiport And Adp Phosphorylation: Exploration Of Mechanisms, Johan Haumann, Ranjan K. Dash, David F. Stowe, Age D. Boelens, Daniel A. Beard, Amadou K.S. Camara

Biomedical Engineering Faculty Research and Publications

ADP influx and ADP phosphorylation may alter mitochondrial free [Ca²⁺] ([Ca²⁺]_m) and consequently mitochondrial bioenergetics by several postulated mechanisms. We tested how [Ca²⁺]_m is affected by H₂PO₄⁻ (P_i), Mg²⁺, calcium uniporter activity, matrix volume changes, and the bioenergetic state. We measured [Ca²⁺]_m, membrane potential, redox state, matrix volume, pH_m, and O₂ consumption in guinea pig heart mitochondria with or without ruthenium red, carboxyatractyloside, or oligomycin, and at several levels of Mg²⁺ and P_i. …