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1. Types Of Alignment: Presentations & Demos Assignment, Sarah O'Leary-Driscoll
1. Types Of Alignment: Presentations & Demos Assignment, Sarah O'Leary-Driscoll
Sequence Alignments
Pairwise Alignment: DNA
Pairwise Alignment: Protein
Multiple Sequence Alignment: DNA
Multiple Sequence Alignment: Protein
Alignment Information, Sarah O'Leary-Driscoll
Alignment Information, Sarah O'Leary-Driscoll
Sequence Alignments
Pairwise DNA alignment is frequently used to identify similar regions that will show how two sequences have functional or structural similarities. It can also be used to show how exons and introns change between different sequences and whether they have an effect on the final structure of the RNA after the DNA is processed within a cell.
Alignment Outline, Sarah O'Leary-Driscoll
2: Sequence Alignment Practice Activity, Sarah O'Leary-Driscoll
2: Sequence Alignment Practice Activity, Sarah O'Leary-Driscoll
Sequence Alignments
Now that you have learned how to do the four basic sequence alignments (Pairwise and Multiple for both nucleotide and protein sequences) select a gene/protein, it may be one that you've used before, and run each of these alignments.