Digital Commons Network^™

Alternative Sampling And Analysis Methods For Digital Soil Mapping In Southwestern Utah, Colby W. Brungard

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Digital soil mapping (DSM) relies on quantitative relationships between easily measured environmental covariates and field and laboratory data. We applied innovative sampling and inference techniques to predict the distribution of soil properties, soil attributes, taxonomic classes, and dominant vegetation across a 30,000-ha complex Great Basin landscape in southwestern Utah. This arid rangeland was characterized by rugged topography, diverse vegetation, and intricate geology. Environmental covariates calculated from digital elevation models (DEM) and spectral satellite data were used to represent factors controlling soil development and distribution. We investigated optimal sample size and sampled the environmental covariates using conditioned Latin Hypercube Sampling (cLHS). …

Ecological Effects Of Genotypic Diversity On Community And Ecosystem Function, Megan K. Kanaga

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Genotypic diversity within populations can have important evolutionary consequences, but the ecological effects of intraspecific genetic variation on community and ecosystem function have only been studied in a few systems. I present the results of a three-year study designed to address the ecological impacts of genotypic diversity in quaking aspen (Populus tremuloides Michx.), using aspen genotypes planted across genotypic diversity levels (monoculture and mixture) and watering treatment levels (well-watered and water-limited). First, I demonstrated that significant variation exists among genotypes for a wide range of growth, morphological and physiological traits, and quantified high heritability and coefficient of genetic variation …

Investigating Methods To Reduce Black Bear (Ursus Americanus) Visitation To Anthropogenic Food Sources: Conditioned Taste Aversion And Food Removal, Kari D. Signor

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Conflicts between humans and black bears (Ursus americanus) jeopardize the safety of both humans and bears, especially when bears become food-conditioned to anthropogenic food sources in areas such as campgrounds. Interest in using non-lethal techniques, such as aversive conditioning, to manage such conflicts is growing. I conducted a captive experiment at The Wildlife Science Center in Minnesota and two field experiments in the La Sal Mountains, Utah, to investigate the effects of taste aversion conditioning using thiabendazole (TBZ) with a novel flavor cue and food removal on black bear food consumption and visitation to human food sources. In …

Designing An Instrument Based On Native Fluorescence To Determine Soil Microbial Content At A Mars Analog Site, Heather D. Smith

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

For this research project we designed an instrument to detect bacteria via biomolecular fluorescence. We introduce the current understanding of astrobiology, our knowledge of life beyond Earth, and the commonality of Earth life as it pertains to the search for life on Mars. We proposed a novel technique for searching for direct evidence of life on the surface of Mars using fluorescence. We use the arid region of the Mojave Desert as an analog of Mars. Results indicate the fluorescence of the biotic component of desert soils is approximately as strong as the fluorescence of the mineral component. Fluorescence laboratory …

Effects Of Coyote Removal On Pronghorn And Mule Deer Populations In Wyoming, Dylan Earl Brown

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I studied the relationship between coyote (Canis latrans) removal and pronghorn (Antilocapra americana) and mule deer (Odocoileus hemionus) density and fawn:doe ratios in southwest Wyoming and northeast Utah in 2007 and 2008. Coyote removal variables studied included the number of coyotes removed, ground hours worked, total hours worked, coyotes removed/aerial gunning hour, coyotes removed/ground work hour, and coyotes removed/total effort hour. None of the variables explained changes observed in fawn:doe ratios of pronghorn or mule deer. The number of coyotes removed, ground hours worked, total hours worked, and coyotes removed/aerial gunning hour were positively …

Summer Home Range Fidelity In Adult Female Elk (Cervus Elaphus) In Northwestern Colorado, April M. Brough

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Understanding the degree of spatial fidelity of individuals within a species increases our ability to manage appropriately. Elk (Cervus elaphus) is a highly managed species in the Intermountain West, but there is little research evaluating summer home range fidelity of individual elk. We evaluated fidelity of 72 adult female elk to individual summer-fall home ranges in the White River study area in northwestern Colorado during two consecutive summers. Based on individual kernel-estimated utilization distributions, we used (1) the Volume of Intersection (VI) statistic and (2) interannual distances between centers of mass to compare summer range overlap and distribution. …

Effects Of Starch Addition On Low Fat Rennet Curd Properties And Their Partitioning Between Curd And Whey, Kelly Marie Larsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study determined the impact of starches on the properties of low fat rennet curd as measured by microstructural and instrumental analysis. In experiment 1, 17 starches were initially screened for swelling power, impact of curd yield at 5 g/L and 10 g/L in milk, and settling in rennet-induced partially acidified low fat curd.

Starches examined were narrowed down to five in experiment 2; they included: modified waxy corn starch, waxy rice starch, instant tapioca starch, dextrin, and a modified tapioca starch. These starches were added to skim milk to make rennet-induced partially acidified milk gels. Gels were made by …

The Effect Of Irrigation Diversions On The Mountain Whitefish (Prosopium Williamsoni) Population In The Big Lost River, Patrick Allen Kennedy

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Management agencies documented a decline in the mountain whitefish (Prosopium williamsoni) population on the Big Lost River, and unscreened diversions were recognized as a potential factor for this decline. Research suggests the Big Lost River mountain whitefish population is genetically unique, and it has been petitioned for protection under the Endangered Species Act. In 2007, a basin-wide synopsis of diversions was conducted to describe relative entrainment and identify diversions that entrained the most mountain whitefish. This larger scaled synopsis facilitated a more precise assessment of entrainment by a subset of diversions in 2008. In 2008, the volume that …

The Effects Of Social Status And Learning On Captive Coyote (Canis Latrans) Behavior, Lynne Barbara Gilbert-Norton

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Many canids live within hierarchical social systems that could promote differences in learning or in behavior between ranked individuals. Differences in foraging and territorial behavior have been observed between ranked coyotes (Canis latrans), yet effects of learning and social status on coyote behavior are not thoroughly understood. I explored a) coyote response to an artificial scent boundary and whether response differed by status, b) how foraging coyotes tracked temporal resource change, and c) how coyotes find spatially distributed food, and the effect of dominance on foraging behavior. I used male/female pairs of captive coyotes at the National Wildlife Research Center …

Disturbance Ecology And Vegetation Dynamics At Varying Spatial And Temporal Scales In Southern Rocky Mountain Engelmann Spruce Forests, R. Justin Derose

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

High-severity disturbances are the primary drivers of Engelmann spruce-subalpine fir ecosystems in the southern Rocky Mountain. Recently, an unprecedented, landscape-wide (at least 250 km2) spruce beetle outbreak killed virtually all the Engelmann spruce on the Markagunt Plateau in southwestern Utah, USA. Results from dendroecological analyses suggested the combination of antecedent disturbance history and drought-driven stand development was responsible for creating suitable host conditions prior to the recent outbreak. Multiple and consistent lines of evidence suggested mixed- and high-severity fires shaped the development of the Markagunt Plateau. Subsequent stand development, influenced by species-specific differential tree-ring response to drought, resulted in the …

Herbicide, Salinity, And Flooding Tolerance Of Foxtail Barley (Hordeum Jubatum L.) And Desirable Pasture Grasses, Karl R. Israelsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Research trials performed in the greenhouse compared the tolerance and response of Hordeum jubatum and desirable pasture grass species to herbicides, salinity, and flooding. Desirable grass species used in this study included: 'Fawn' tall fescue (Festuca arundinaceae), 'Garrison' creeping foxtail (Alopecurus arundinaceus), 'Palaton' reed canarygrass (Phalaris arundinacea), 'Climax' timothy (Phleum pratense), 'Alkar' tall wheatgrass (Thinopyrum ponticum), 'Potomac' orchardgrass (Dactylis glomerata), and 'Mustang' altai wildrye (Leymus angustus). Tolerance to herbicides, salinity, and flooding varied significantly among grass species. Herbicide tolerance was tested using four herbicides at five …

Cognitive Inference And Resulting Behaviors In Response To Ambiguous Threat In The Coyote, Canis Latrans, Sarah Shawnee Dawson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

While antipredator strategies have been a focus of behavioral research for decades, scientists generally study the responses of prey toward overt, explicit threat. However, risk can also be significant when a threat is covert, such as when an ambush predator may be nearby or a secondary threat remains after a predator's departure. Little is known about the mechanism that prey use to assess risk in a predator's absence. Tests were conducted to determine the manner in which coyotes respond to these ambiguous threats. Specifically, I tested whether coyotes respond to prior anthropogenic activity that has occurred near their only food …

Validation Of A Peer-Teaching-Peer Paraprofessional Model In Teen Parenting Nutrition Education, Sylvia D. Keller

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Each year, teen pregnancy occurs in 750,000 15-to-19 year-old women in the United States (U.S.). Utah has the youngest population and the lowest teen abortion rates in the U.S. Approximately 73% of teen pregnancies in Utah result in live births. The prevalence of teen pregnancy and the nutritional risk to mother and child result in a much greater need for social support, such as nutrition education. Current literature shows that the paraprofessional model is effective in increasing positive behavior change through nutrition education. Presently, there is a lack of evidence that paraprofessional teens are capable of accurately and effectively teaching …

Mycorrhizae In Sagebrush-Steppe Community Restoration: Mycorrhizal Dependency Of Invasive And Native Grasses With Intraspecific And Interspecific Competition, Dara S. Scherpenisse

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mycorrhizae have been used in restoration for decades. However, studies assessing the use of mycorrhizae in Bromus tectorum-invaded areas of the Great Basin are limited. Two greenhouse pot experiments were conducted to assess the role of mycorrhizae in sagebrush restoration.

The first objective (Chapter 2) was to determine the response of Pseudoroegneria spicatum, Elymus elymoides, and B. tectorum to mycorrhizal symbiosis by altering phosphorus, density, species, presence of mycorrhizae and water levels in a 5 factor design. To assess the mycorrhizal response, a variety of morphological and physiological traits were measured, such as tissue P concentration, specific …

Modeling Potential Native Plant Species Distributions In Rich County, Utah, Kathryn A. Peterson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Georeferenced field data were used to develop logistic regression models of the geographic distribution of 38 frequently common plant species throughout Rich County, Utah, to assist in the future correlation of Natural Resources Conservation Service Ecological Site Descriptions to soil map units. Field data were collected primarily during the summer of 2007, and augmented with previously existing data collected in 2001 and 2006. Several abiotic parameters and Landsat Thematic Mapper imagery were used to stratify the study area into sampling units prior to the 2007 field season.

Models were initially evaluated using an independent dataset extracted from data collected by …

Terrestrial Small Mammals From The Gamba Complex In Gabon: Distribution Patterns And Landscape Influences, Carrie J. O'Brien

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The small mammal communities of central Africa are not well understood, and the southwestern section of Gabon has not been previously surveyed except for some recent work in Monts Doudou. At five sites within the Gamba Complex we set out to 1) document the species of terrestrial rodents (Muridae) and shrews (Soricidae) weighing less than 100 g, 2) compare the community composition between inland and coastal sites, and 3) evaluate our sampling protocols. Using a combination of pitfall lines, Sherman live traps, and snap traps we captured 721 individuals of 12 rodent and 10 shrew species in 15,792 trap-nights. The …

Design And Evaluation Of Oligonucleotide Microarrays For The Detection Of Bovine Pathogens, Ryan Weldon Black

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Two microarray designs were developed and produced to screen for multiple bovine pathogens commonly found in the cattle industry today. The first microarray was designed, built, and processed in-house using conventional material and equipment and targeted Pasteurella multocida, Manheimia haemolytica, Histophilus somni, and Arcanobacterium pyogenes. For each pathogen, 12 perfect-match oligonucleotide probes, which were also designed in-house, targeted different sections of the respective 16S ribosomal genes, and were coupled with 12 corresponding mismatched probes for background. These arrays were able to produce distinct hybridization patterns for each pathogen that were easily visible without the need for …

Consequences Of Vegetation Change On The Dynamics Of Labile Organic Matter And Soil Nitrogen Cycling In A Semiarid Ecosystem, Toby D. Hooker

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Sagebrush-dominated ecosystems are being transformed by wildfire, rangeland improvement techniques, and exotic plant invasions. These disturbances have substantial effects on the composition and structure of native vegetation, but the effects on ecosystem C and N dynamics are poorly understood. To examine whether differences in dominant vegetation affect the quantity and quality of plant organic matter inputs to soil, ecosystem C and N pools and rates of plant turnover were compared among historically grazed Wyoming big sagebrush, introduced perennial crested wheatgrass, and invasive annual cheatgrass communities. Since low soil moisture during the summer may inhibit the microbial colonization of plant detrital …

Targeting Fat-Sensitive Pathways In Enteroendocrine Cells Using Nanoparticle-Mediated Drug Delivery, Bhavik P. Shah

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The current epidemic of obesity has been linked to an increase in fat intake associated with the Western diet. Nutrient-induced stimulation of enteroendocrine cells in the small intestine leads to the release of hormones that contribute to satiety and the control of food intake. In particular, ingested fat, specifically in the form of free fatty acids, is potent activator of enteroendocrine cells in the proximal small intestine. However, the underlying signaling cascade that free fatty acids initiate in these enteroendocrine cells, which leads to secretion of satiety hormones, is not known. In general, my research is focused on identifying nutrient-responsive …

The Use Of Reverse Genetics To Clone And Rescue Infectious, Recombinant Human Parainfluenza Type 3 Viruses, Jason Peter Roth

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Reverse genetics is a discipline that involves the use of genetic manipulation and modification to study an organism's altered phenotype. In this study, infectious recombinant viruses were rescued from altered cDNA clones encoding the antigenome of human parainfluenza virus type 3 and the resulting phenotypes were examined. In one clone, the gene for the enhanced green fluorescent protein was inserted into the virus antigenome to be expressed during viral replication, resulting in infected cells emitting green fluorescence. Viral titers, mRNA replication, and genomic replication for the virus expressing the enhanced green fluorescent protein were reduced when compared to the human …

Mechanisms Of Induced Cell Death In Bluetongue Virus Challenged Human Cell Lines, Justin Darrel Hoopes

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bluetongue virus (BTV) is a pathogenic member of the Reoviridae family. BTV does not cause disease in humans, but is capable of selectively infecting and killing certain transformed human cell lines. Understanding BTV's oncotrophism may lead to new therapeutics for treating cancer. This study focused on the underlying mechanisms of BTV-induced cell death in carcinoma cell lines. It was our hypothesis that BTV infects human carcinoma transformed cells, produces mRNA and protein, induces a strong inflammatory response, induces mitogen activated protein kinase (MAPK)-based pro-apoptotic signaling, inhibits PKB-based signaling, and eventually kills the cell by inducing apoptosis.

Three carcinoma cell lines …

Effects Of Targeted Grazing And Prescribed Burning On Fire Behavior And Community Dynamics Of A Cheatgrass (Bromus Tectorum)-Dominated Landscape, Joel M. Diamond

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Studies were conducted to determine the effectiveness of using targeted grazing and prescribed burning as tools to reduce fire hazards and cheatgrass (Bromus tectorum) dominance on rangelands in the northern Great Basin. A field study, with four grazing-burning treatments (graze and no-burn, graze and burn, no-graze and burn, and no-graze and no-burn), was conducted on a B. tectorum-dominated site near McDermitt, Nevada from 2005-2007. Cattle removed 80-90% of standing biomass in grazed plots in May 2005 and 2006 when B. tectorum was in the boot (phenological) stage. Grazed and ungrazed plots were burned in October 2005 and …

River Network Structure: A Template For Understanding Predator-Prey Dynamics And Potential Anthropogenic Impacts, Catherine L. Hein

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A landscape perspective is critically important for understanding community structure, particularly in systems dominated by migratory fauna. I aimed to understand how the structure of riverscapes in Puerto Rico mediates potential anthropogenic impacts, predator-prey interactions, and the migratory behavior of a diadromous species. I surveyed fishes and shrimps at sites throughout two watersheds, designed transplant experiments that investigated the role of natural barriers on predator-prey interactions, and developed models of shrimp migration specific to a particular river network. I did not detect an effect of anthropogenic changes to the landscape on fish and shrimp species distributions in two watersheds that …

Greater Sage-Grouse Ecology, Chick Survival, And Population Dynamics, Parker Mountain, Utah, David K. Dahlgren

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

We estimated survival of ~ 1-day-old chicks to 42 days based on radio-marked individuals for the Parker Mountain greater sage-grouse (Centrocercus urophasianus) population. Chick survival was relatively high (low estimate of 0.41 and high estimate of 0.50) compared to other studies. Brood-mixing occurred for 21 % of radio-marked chicks, and within 43 % of radio-marked broods. Our study showed that brood-mixing may be an important ecological strategy for sage-grouse, because chicks that brood-mixed experienced higher survival. Additionally, modeling of chick survival suggested that arthropod abundance is important during the early brood-rearing period (1 - 21 days). We also …

Predation On Domestic Sheep On Summer Range Lands In Southwestern Utah, Brian Carl Palmer

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Much of the decline of the U.S. sheep industry has been attributed to losses caused by predators. Most predatory losses are inflicted on lambs rather than ewes. Losses have historically ranged from 4-8% of lamb crops, inflicting significant financial loss on ranchers. However, most research providing data on sheep predation is over 20 years old. Changes in the sheep industry as well as predation rates may make previous loss rates inapplicable to current conditions. Coyotes (Canis latrans) are the primary predator of concern when it comes to sheep losses, but increasingly, cougars (Felis concolor) and black …

Speciation, Species Concepts, And Biogeography Illustrated By A Buckwheat Complex (Eriogonum Corymbosum), Mark W. Ellis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The focus of this research project is the complex of infraspecific taxa that make up the crisp-leaf buckwheat species Eriogonum corymbosum (Polygonaceae), which is distributed widely across southwestern North America. This complex provides an ideal taxonomic group for research into population relationships and speciation. To avoid unnecessary debates about taxonomic validity or contentious issues regarding appropriate species definitions, the historical evolution of the species concept is first reviewed in detail, demythologizing an often-assumed species problem. Following that review, the E. corymbosum complex is examined specifically.

Although eight varieties of E. corymbosum are currently recognized based on morphological characters, this group …

Linking Space Use And Behavior In Clark's Nutcracker: An Explanation For Seasonal Variation In Space Use, Teresa J. Lorenz

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Clark's Nutcrackers (Nucifraga columbiana) are important seed dispersers for at least 10 species of conifer in western North America and are obligate mutualists for the subalpine tree, whitebark pine (Pinus albicaulis). Despite the important role they play in forest regeneration, space use by nutcrackers has not been formally studied. Several hypotheses exist to explain their year-round space use patterns. I tested one hypothesis that Clark's Nutcrackers migrate altitudinally between summer and autumn in one population in the Cascade Range, Washington. In 2006 and 2007, I compared seasonal differences in summer and autumn space use by 26 …

Consumer-Driven Nutrient Recycling In Arctic Alaskan Lakes: Controls, Importance For Primary Productivity, And Influence On Nutirient Limitation, Cody R. Johnson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In lakes, fish and zooplankton can be both sources and sinks of nitrogen (N) and phosphorus (P) through the consumption of organic N and P, and subsequent excretion of bioavailable inorganic forms. These source/sink dynamics, known as consumer-driven nutrient recycling (CNR), may, in turn, control the availability of potentially limiting nutrients for algal primary production. In this dissertation I investigate the importance and controls of CNR as a source of inorganic N and P for primary production (Chapter 2). I then examine zooplankton CNR as a mechanism for increasing nutrient mean resident time (MRT) in the mixed layer of lakes …

The Regulation Of Epithelial Sodium Channels In Mammalian Taste Receptor Cells, Arian F. Baquero Gonzalez

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Nutrient recognition is one of the main physiological roles of the gustatory system. In mammals, it is well established that the taste of sodium salts is primarily mediated by sodium influx through the epithelial sodium channel. The epithelial sodium channel is a sodium-specific ion channel that is expressed across a wide range of transporting epithelia such as colon, kidney, and taste. In addition to its role as a salt taste receptor, sodium influx through the epithelial sodium channel is important systemically for maintaining sodium balance and blood pressure. Following our earlier work on the endocrine regulation of salt taste at …

Watershed-Scale Analysis Of Riparian Buffer Function, Molly Van Appledorn

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The ability of riparian buffers to filter undesirable nutrients from upland sources has long been recognized as an important ecosystem service for maintaining or improving water quality, and as a result, many land management strategies have been built around the preservation or restoration of buffer zones. Newly derived flow-path metrics have shown great promise as a way to assess riparian buffer function at the watershed scale but a thorough investigation of metric performance was necessary. The goals of this study were to: 1) test the independence of flow-path metrics from traditional metrics using a spatially extensive, independent sample of watersheds, …