Digital Commons Network^™

U.S. Perceptions Of Economic Mobility Since The Enactment Of Nafta And Their Impact On American Politics And Society, Jairemy Quinton Edwards

Open Access Theses & Dissertations

In this study, I examine how perceptions of NAFTA developed over 20 years since its enactment, measured as perceived economic mobility in 2016, have affected more recent public perceptions leading to increased, controversial tendencies towards nationalism, protectionism, and pessimism about the future of the U.S. economy. I then assess whether and how such perceptions in turn may have affected voter perceptions about Donald Trump, setting the stage for his 2016 election victory. Therein, I have found that among U.S. voters in 2016, those with perceptions of reduced economic mobility since the enactment of NAFTA were significantly more likely to have …

Ultrafine Black Carbon: A Cumulative Assessment On The Physiology Of Lung - Derived Cells, M Esther Salinas

Open Access Theses & Dissertations

Combustion-derived nanomaterials are noxious ultrafine (<100 nm) aerosolized by-products generated by human activity. They pose threats to pulmonary health due to their small size, allowing them to penetrate deep into the alveolar regions causing detrimental responses downstream. Indeed, an examination between nanocarbon particle exposure and poor pulmonary health via cellular behavior was needed. I hypothesized that low-dose and long-term administrations of carbonaceous nanoparticles contribute to respiratory conditions by irritating lung-derived cells. Responses to ultrafine black carbon (UBC), a key component of airborne pollutants, by human lung A549 and murine lung LA4 epithelial cells, human peripheral-blood monocytes THP1, and murine macrophages RAW264.7 were investigated. These lines were chosen because epithelial cells and mononuclear cells (monocytes and macrophages) are the first to come in contact with inhaled particulate matter (PM) and contribute to stress and inflammation of pulmonary tissues. The cells were first plated on day zero and fed fresh UBC suspended in culture media on days one, four, and seven. The exposure regimen included three different low-level concentrations of UBC. On day ten, all cells were prepared for subsequent assays. Effects on cellular viability revealed that UBC was modestly cytotoxic while ATPase and esterase activity (termed enzyme vitality for the purpose of this study) were significantly diminished in a dose-dependent manner. Additionally, beta-galactosidase proportionally increased with UBC concentration compared to untreated cells, indicating that cellular senescence was promoted across all cell types. Multiple markers of oxidative stress were subsequently measured, showing non-uniform trends and displaying moderate accumulation of oxidative damage, contingent upon cell line and UBC treatment. However, a significant induction of inner mitochondrial membrane depolarization of human UBC-treated cells was observed; an aberrant cell-cycle progression was found across all cells. The implemented regimen of UBC exposure elicited an imbalance of free (reduced) glutathione, altered mitochondrial potential, and abnormal cell-cycle activity. This method demonstrated that modifications across both species induced changes to cellular fitness overall. The data supported that compounding nanosized black carbon exposure could negatively affect overall pulmonary cell health by distinctively modifying intracellular activity. Additionally, we further surmised that sustained exposure to nanocarbon could impair innate immunity. Therefore, reactive oxygen species (ROS), reactive nitrogen species (RNS), and cytokine levels upon continuous administrations to 3.0 μg/mL UBC after brief challenges to microbial proxies were assessed; on day 9, the cells were succumbed to three different microbial insults (LPS, Poly I:C, and Zymosan). On day 10, measurements demonstrated a moderate accumulation of oxidative stress, conditional to each cell type. Thus, UBC plus microbe approach triggered pro-oxidant levels and cytokine production across different cell types and diminished phagocytic response by murine macrophages. Based on the results, ultrafine-PM exposure may impair inflammatory function in response to pathogenic infections. In summation, our findings indicated that additive nanosized UBC in combination with microbe-like challenges may compromise cellular behavior, suggesting potential ways by which inhalation of ultrafine-PM may contribute to or exacerbate poor pulmonary health.

Novel Methods For The Inactivation Of Cruzain For The Prevention And Treatment Of Chagas Disease, Veronica Gonzalez

Open Access Theses & Dissertations

Chagas Disease, also known as American Trypanosomiasis, is endemic to Latin American and is gradually making its way to other countries. The disease is caused by Trypanosoma cruzi, a protozoan parasite that causes lesions and inflammation of organs including the heart, esophagus, and colon. Over 30% of people infected will develop heart disease which can be fatal if untreated. While no vaccine is yet available, research is currently being conducted in finding new treatments for the disease. One target is an enzyme that is believed to help the progression of the disease. Cruzain, a cysteine protease expressed as a pro-enzyme, …

Movimiento Saludable "Movs" Project: Impact On Fruit And Vegetable Intake Using Reflectance Spectroscopy And Relationship With Behavioral Theory Predictors, Karen Marleen Juarez

Open Access Theses & Dissertations

Background. Movimiento Saludable (MOVS), a component of Ciudadanos Comprometidos con la Paz (CCOMPAZ) in Ciudad Juarez, MX is an after-school lifestyle program that was implemented at five schools during 2016 - 2017. The purpose of the MOVS program is to prevent chronic diseases such as obesity and diabetes in children. The MOVS curriculum includes two components: a) physical conditioning through dance, body expression, and free play, and b) nutrition education and healthy meals to increase fruit and vegetable (F/V) intake. The Paso del Norte Institute for Healthy Living (IHL) at UTEP collected the data to conduct an evaluation of the …

Platelet Biology And Thrombosis: Juul E-Cigarette Exposure And 5ht2a Receptor Drug Discovery, Jean Emmanuel Montes Ramirez

Open Access Theses & Dissertations

x

Neuromuscular Electrical Stimulation: A Novel Treatment Intervention For Improving Metabolic Health In An Overweight/Obese Population, Michelle J. Galvan

Open Access Theses & Dissertations

Background: Most U.S. adults (80%) do not meet minimum exercise recommendations by ACSM (CDC, 2015). Using an in vitro primary cell culture model, we and others have shown that muscle contraction induced by electrical stimulation results in increased glucose transporter 4 (GLUT4) protein, glucose uptake and mitochondrial content. Neuromuscular electrical stimulation (NMES) is a novel alternate strategy to induce muscle contraction, using electrical impulses. However, effectiveness of NMES induced muscle contraction to improve insulin sensitivity and energy expenditure is not clear. The purpose of this study was to investigate the effects of four weeks of NMES on insulin sensitivity in …

Manfreda Maculosa Leaf Extracts And Their Effects On Whole And Selected Myotoxic Components In Crotalid Venom, Charles Steven Gilbert

Open Access Theses & Dissertations

Manfreda spp have been used for the treatment of snakebite by several cultures in North and Central America (Austin & Honychurch, 2004, Johnson, 1999, Moerman, 2008, Verhoek, 1978a). There has been no systematic study of the genus Manfreda for its usefulness in the treatment of snakebite.

While the annual incidence of snakebite in the United States is relatively low (approximately 8,000 - 10,000), with a low mortality rate of 5 - 6 cases per year, there is still significant morbidity associated with snakebite (CDC - NIOSH, 2018, Springhouse Corp (eds), 2005). Worldwide numbers of the cases of snakebite can only …

Combination Of Resampling Based Lasso Feature Selection And Ensembles Of Regularized Regression Models, Abhijeet R. Patil

Open Access Theses & Dissertations

In high-dimensional data, the performance of various classiers is largely dependent on the selection of important features. Most of the individual classiers using existing feature selection (FS) methods do not perform well for highly correlated data. Obtaining important

features using the FS method and selecting the best performing classier is a challenging task in high throughput data. In this research, we propose a combination of resampling based least absolute shrinkage and selection operator (LASSO) feature selection (RLFS)

and ensembles of regularized regression models (ERRM) capable of handling data with the high correlation structures. The ERRM boosts the prediction accuracy with …

Dust Storms And The Dispersal Of Aquatic Invertebrates In The Chihuahuan Desert Ecoregion, Jose Rivas Jr.

Open Access Theses & Dissertations

The Chihuahuan Desert surrounding El Paso, Texas is one of the most intense sources of dust in the Western Hemisphere. Within this vast desert are ephemeral wetlands with micrometazoan propagules contained within their sediment egg banks. Dispersal of aquatic microinvertebrates between habitats is vital for the success of their populations. Passive dispersal of the propagules provides an escape mechanism from unfavorable conditions. Upon desiccation of these habitats, windstorms can potentially transport propagules mixed within entrained sediments across regional scales. To study this process, I collected falling sediment from 91 windstorms, with 59 samples collected at the University of Texas at …

Identification Of The Cell Type Expressing The Glycine Transporter 1 (Glyt1) In The Thalamus, Patricia A. Lozano

Open Access Theses & Dissertations

Glycine acts as an inhibitory neurotransmitter and a co-agonist of NMDAR at the glutamatergic synapses. Termination of glycinergic neurotransmission is achieved by glycine transporter 1 (GlyT1) and glycine transporter (GlyT2). Both transporters are expressed in the spinal cord, brainstem and cerebellum, but GlyT1 is also expressed in the retina and the forebrain. Previous studies have described the role and cyto- architecture of GlyT1 in the caudal areas of the brain and retina, but not in the structures of the forebrain. Based on our preliminary data, GlyT1 is highly expressed in the thalamus, an area involved in sensory and motor signal …

Prediction Of O-Glycosylation In Proteins For Different Polypeptide Galnac-Transferases, Jonathon Edward Mohl

Open Access Theses & Dissertations

Mucin-type O-Glycosylation is a posttranslational modification of proteins found on secreted and cell surface proteins in most animals which serves multiple important biological functions. Â In humans, mutations and changes in the expression levels of O-glycosylating polypeptide GalNac-transferases (GALNTs) have been linked to diabetes and multiple cancers. In most animals the GALNTs are compose a large family of isoforms with humans having 20 isoforms. Presently, the prediction of the sites that will be O-glycosylated is a difficult task due to each isoforms different substrate preference. In this work ISOGlyP, an isoform specific O-glycosylation prediction program, was redesigned and expanded to …

The Effectiveness Of The Natural Ear On Adults Ability To Accurately Match Pitch, Kendra Nicole Rosales

Open Access Theses & Dissertations

Background: Many theories, such as oral motor, perceptual, and sensorimotor deficits, have been posited to explain inaccurate pitch matching abilities. The current study identifies with the sensorimotor deficit theory and found it to be the most plausible explanation for inaccurate singing abilities. The Natural Ear (NE) program was designed to process voice productions in real-time and filter out the discordant harmonics, allowing a person to hear only their F0.

Purpose: The purpose of this study was to examine the effectiveness of the Natural Ear program in increasing pitch matching accuracy in singers.

Methods: A total of 50 participants were included …

Assessing Rotifer Diversity In Desert Wetlands Through Sediment Rehydration And Amplicon Sequencing, Sergio David Samaniego

Open Access Theses & Dissertations

Species living in temporary wetlands can be threatened due to the instability and fluctuation of rising temperatures and evaporation caused by global climate change. In addition, regions characterized by dry climates, where most temporary wetlands exist, are expected to have a stronger response to climate change than other ecosystems. While most organisms are not able to respond to rapid changes in their environments, others like freshwater invertebrates have shown great resiliency to short- and long-term ecological disturbances. Rotifers for example, inhabit temporary waters that remain desiccated for indefinite periods of time making assessment of rotifer biodiversity challenging. Fortunately, many microinvertebrates …

A Computational Method For Predicting Functional Effects Of Cancer-Related Genetic Sequence Variants, Bofei None Wang

Open Access Theses & Dissertations

Rapid advances in next generation sequencing (NGS) technologies provide many oppor- tunities to identify associations between genetic sequence variants (GSV) and diseases, which may lead to better clinical diagnosis and treatments. OncoMiner is a bioinformatics pipeline developed at UTEP (OncoMiner.utep.edu) for mining NGS data. It can identify exonic sequence variants, link them with associated literatures, visualize genomic locations and compare their occurrence frequencies among dierent groups. However, the current version of OncoMiner is limited to accepting only a specic input le format provided by the Otogenetics NGS Lab Services. The main objectives of my current work are (1) to de- …

Potential Of Nanoscale Elements To Control Fusarium Wilt Disease In Tomato (Solanum Lycopersicum), Enhance Macronutrient Use Efficiency, And Increase Its Yield, Ishaq Olarewaju Adisa

Open Access Theses & Dissertations

Nanotechnology has a great potential in ensuring food production, security and safety globally. Over the past decade, research on the use of nanomaterials to supply nutrient elements and protect plants from pest and diseases has significantly increased. Tomato (Solanum lycopersicum) is one of the most consumed vegetables in the world and United State is one of its largest producers globally generating billions of dollars annually in revenue.. Tomato plants are affected worldwide by Fusarium wilt caused by Fusarium oxysporum f. sp. Lycopersici. There is growing concern about excessive use of conventional pesticides in controlling Fusarium and other diseases in tomato …

Movement Ecology Of A Cryptic Ambush Predator: Integrating Radio Telemetry And Tri-Axial Accelerometry To Evaluate Spatial Strategies And Activity Patterns By Western Diamond-Backed Rattlesnakes (Crotalus Atrox), Dominic L. Desantis

Open Access Theses & Dissertations

An animal's decision to move from one location to another within its environment is determined by a complex blend of internal and external factors. Teasing apart the relative roles of specific variables in this web of interacting mechanisms has been a long-standing challenge in animal movement ecology. Historically, this problem was viewed as a sort of black box for which a myriad of methodological limitations precluded rigorous study. Recently, a diversity of animal-borne transmitters and dataloggers (i.e., bio-loggers) have circumvented many of these traditional limitations and transformed field studies of animal movement, behavior, and physiology - in some cases, allowing …

Computational Study Of Disease Related Proteins Form Electrostatic Point Of View, Chitra Bahadur Karki

Open Access Theses & Dissertations

In the last three decades, many giant DNA viruses have been discovered. The giant viruses present a unique and essential research frontier for the study of self-assembly and regulation of supramolecular assemblies. The question on how these giant DNA viruses assemble thousands of proteins so accurately to form their protein shell, the capsids, remains largely unanswered. Revealing the mechanisms of giant virus assembly will help to discover the mysteries of many self-assembly biology problems. Paramecium Bursaria Chlorella Virus 1 (PBCV-1) is one of the most intensively studied giant viruses. Based on the high-resolution structure of PBCV-1, we implemented a multi-scale …

Evaluation Of Ctla-4 Blockage Therapy With Metronomic Chemotherapy For The Treatment Of Preclinical Breast Cancer, Karla Parra

Open Access Theses & Dissertations

Background Although there are reports that metronomic cyclophosphamide can be immune stimulating, the impact of its combination with anti-CTLA-4 immunotherapy for the treatment of cancer remains to be evaluated.

Methods Murine EMT-6/P breast cancer, or its cisplatin or cyclophosphamide (CTX) resistant variants, or CT-26 colon, were implanted into Balb/c mice. Established tumors were monitored for relative growth following treatment with anti-CTLA-4 antibody alone or in combination with; a) metronomic CTX (ldCTX; 20mg/kg/day), b) Bolus (150mg/kg) plus ldCTX, or c) sequential treatment with gemcitabine (160mg/kg every 3 days).

Results EMT-6/P tumors responded to anti-CTLA-4 therapy, but this response was less effective …

Molecular Mechanism Of Neurodegeneration Induced By 4-Nonylphenol, Michelle Alejandra Aranda

Open Access Theses & Dissertations

Neurodegeneration, a progressive loss of nerve cells, occurs in many neurological disorders, including Alzheimer's disease (AD) and Parkinson's diseases (PD), as well as in dementia. The pathogenesis of these diseases is unknown, and recent evidence suggests that environmental factors, which act as endocrine-disrupting compounds (EDCs) could play a significant role in developing the disease process. 4-Nonylphenol (4-NP), an EDC, and a ubiquitous environmental toxin has been shown to affect brain development and may cause neurodegeneration. 4-NP is produced in large quantities in the U.S. and used as raw materials for making detergents, pesticides, plastics, paints, cosmetics, rubber, and other industrial/household …

Gpcr-Pendb: A Database Of Protein Sequences And Derived Features To Facilitate Prediction And Classification Of G Protein-Coupled Receptors, Khodeza Begum

Open Access Theses & Dissertations

G protein-coupled receptors (GPCRs) constitute the largest group of membrane receptor proteins in eukaryotes. Due to their significant roles in various physiological processes such as vision, smell, and inflammation, GPCRs are the targets of many prescription drugs. However, the functional and sequence diversity of GPCRs has kept their prediction and classification based on amino acid sequence data as a challenging bioinformatics problem. There are existing computational approaches, mainly using machine learning and statistical methods, to predict and classify GPCRs based on amino acid sequence and sequence derived features. In this project, we have constructed a searchable MySQL database, named GPCR-PEnDB …

Shining Light On An Amygdala -- Brainstem Connection Important For Attention Processing, Jose Carlos Cano

Open Access Theses & Dissertations

We are continuously being exposed to an exorbitant amount of sensory information, which should result overwhelming. However, the nervous system operates several intrinsic sensory filtering mechanisms that allow us to cope with such sensory cluttering and shape appropriate behavior. Sensorimotor gating is a pre-attentive neuronal filtering mechanism that gates superfluous sensory information, and orients attentional resources towards salient information processing. Its relevance becomes in individuals suffering from schizophrenia and several otherwise unrelated neuropsychiatric disorders where sensorimotor gating is impaired. To understand the neural impaired mechanisms, extensive research studies have focused on first identifying the neural substrates underlying sensorimotor gating. This …

The Drones' Impact On Precision Agriculture, Ibrahim Naji

Open Access Theses & Dissertations

A study to assess the overall impact of drones in the agricultural sector. The specific goal of this research was to provide a drone system to ward off pestering birds from crops to allow for better growth and an increased yield. Along with providing a user-friendly coded drone system for farmers that is cost effective, this project has inspired other areas of use for the drone.

Non Linear Optics For Materials Fabrication And Medical Instrumentation, Aurelio Paez

Open Access Theses & Dissertations

Two-photon absorption is a nonlinear optical process where two photons are absorbed by a molecule simultaneously. The probability of this quantum phenomenon is proportional to the quadratic excitation of light intensity. It has many applications in biomedical and materials research, such as two-photon fluorescence microcopy. The first project is to apply two-photon absorption induced bond cleavage in photoreactive materials for engineering 3D tissue scaffolds. The major challenge for growing thick 3D tissues is the lack of vasculature, where nutrients and oxygen can be delivered to the growing cells. Our collaborators have synthesized a novel polypeptide that is composed of 34-mer …

The Role Of P62/Imp2 In Hepatocellular Carcinoma Progression, Mengtao Xing

Open Access Theses & Dissertations

The family of insulin- like growth factor 2 mRNA binding proteins (IMPs) contains three members: IMP1, p62/IMP2 and IMP3. All these proteins are oncofetal proteins, expressed during embryogenesis and lost in most tissues in adults. However, p62/IMP2 were found overexpressed in various cancers but its function in carcinogenesis remains to be investigated. Our previous studies found that p62/IMP2 was not only overexpressed in hepatocellular carcinoma (HCC) tissues, but also overexpressed in HCC cell lines. To explore the biological roles of p62/IMP2 in HCC progression, p62/IMP2 was knockout in two p62/IMP2 positive HCC cell lines (SNU449, HepG2). Due to the low …

Generation, Identification And Characterization Of Novel Monoclonal Antibodies Against Ctla-4, Pd-1 And Btla For The Treatment Of Cancer, Rosabril Acuna

Open Access Theses & Dissertations

Members of the CD28 co-inhibitory receptor family, Cytotoxic T-lymphocyte- associated antigen 4 (CTLA-4), Program death-1 (PD-1) and B- and T-lymphocyte attenuator (BTLA) are type I transmembrane proteins expressed on a variety of immune cells. Co- inhibitory receptors deliver "off" signals that play an important role in down regulating immune cell activation. Manipulation of inhibitory signals have shown to be a powerful strategy in the treatment of autoimmune diseases, infectious diseases and various forms of cancer. In fact, the FDA (Food and Drug Administration) has approved the use of monoclonal antibodies against CTLA-4 (Ipilimumab) for the treatment of metastatic melanoma, against …

Serosurvey For Evidence Of Dengue And West Nile Virus Human Infections In El Paso, Texas, Veronica Suarez

Open Access Theses & Dissertations

Dengue viruses (DENV), including the 4 serotypes are the cause of dengue fever and dengue hemorrhagic fever. The viruses are transmitted by Aedes aegypti mosquitoes in urban communities in tropical, sub-tropical, and temperate regions and are the cause of the highest rate of infection and death of all known Flaviviruses. DENV are endemic in United States (US) -Mexico (MX) border communities in the Rio Grande Valley and suspected of being endemic in Ciudad Juarez, a sister city to El Paso, TX. To determine if DENV were endemic in the El Paso community, cord-blood samples from mothers were tested for antibody …

Recent Changes In The Zooplankton Communities Of Arctic Tundra Ponds In Response To Warmer Temperatures And Nutrient Enrichment, Mariana Vargas Medrano

Open Access Theses & Dissertations

Warming is altering Arctic freshwater ecosystems, enriching the water column, increasing primary productivity and shifting the composition, dominance and the timing of emergence and reproduction of zooplankton communities. Historic data from arctic tundra ponds near UtqiaÄ¡vik, AK have given us valuable insight into changes that have occurred in recent times. A change of dominance from cyclopoid copepods to Daphnia middendorffiana has occurred over a 40 year period. Daphnia are more common, abundant and larger, which may be explained by increased primary productivity stimulated by nutrient release from permafrost thaw. Copepods and fairy shrimp emerged earlier from the overwintering states, which …

Naturally Derived Compounds As Preventatives Of Proteinopathies, Lois Mendez

Open Access Theses & Dissertations

Neurodegenerative diseases, such as Parkinson’s disease (PD), afflict millions worldwide. Of greater concern is the fact that a main risk factor this disease is aging and the baby boomer population is now reaching a geriatric age. Despite the active research in this area, little progress has been made in the development of therapeutic strategies and furthering of our understanding in pinpointing the causal events that onset these disease processes. Our lab has focused on studying the protein homeostasis of key biomarkers in neurodegenerative diseases and examining whether natural compounds can act as neuro-protectants and, thus, attenuate the pathology that ensues …

Fishers' Ecological Knowledge And Stable Isotope Analysis: A Social-Ecological Systems Approach To Endangered Species Conservation, Kathryn Rose Wedemeyer-Strombel

Open Access Theses & Dissertations

Identifying developmental habitat is essential for understanding population structure and species resiliency, especially for critically endangered species. In long-lived, oceanic, migratory animals such as sea turtles, elucidating developmental grounds is particularly difficult. When data are deficient or challenging to acquire, scientists often lean towards traditional quantitative methods when a social-ecological systems approach could better provide crucial baseline data and guiding information. Fishers’ ecological knowledge (FEK), the combination of experiential and culturally transmitted knowledge, is expert knowledge and should be treated as such. In 2008, FEK led to the “rediscovery” of the critically endangered eastern Pacific (EP) population of hawksbill sea …

Hspg2 Mediates Mandibular Jaw Joint Development, Barbara Samantha Castellanos

Open Access Theses & Dissertations

We present a patient diagnosed with a multiple congenital anomaly syndrome characterized by scoliosis, intellectual disabilities, and craniofacial defects. Trio-based whole exome sequencing identified compound heterozygous variants in the HSPG2 gene: a maternally inherited c.5998-7A>G variant in the promoter region and a paternally inherited c.4916C>T variant in the coding sequence. HSPG2 encodes for perlecan, a large proteoglycan that plays an important role in cartilage formation, cell adhesion, and basement membrane stability. Mutations in HSPG2 have been associated with Schwartz-Jampel syndrome and Dyssegmental Dysplasia Silverman-Handmaker Type, two disorders characterized by skeletal abnormalities (1). These data indicate a function for …