Digital Commons Network^™

Similarity Of Trajectories Taking Into Account Geographic Context, Maike Buchin, Somayeh Dodge, Bettina Speckmann

Journal of Spatial Information Science

The movements of animals, people, and vehicles are embedded in a geographic context. This context influences the movement and may cause the formation of certain behavioral responses. Thus, it is essential to include context parameters in the study of movement and the development of movement pattern analytics. Advances in sensor technologies and positioning devices provide valuable data not only of moving agents but also of the circumstances embedding the movement in space and time. Developing knowledge discovery methods to investigate the relation between movement and its surrounding context is a major challenge in movement analysis today. In this paper we …

Why You Should Care About The Threatened Middle Class, Jill Littrell, Fred Brooks, Jan Ivery, Mary Ohmer

jill l littrell Dr.

In the last two decades, the income and security of the individual middle class worker has declined and the gap between the middle class and the wealthy has widened. We explain how this is bad for democracy, the economy, and the aggregate health of the nation. We examine the governmental policies and interventions that increased the middle class following the depression and maintained its vigor through the post-World War II period. The impetus for these changes in governmental policies in the 1930s was to end the Great Depression. We pose the question of whether a nation can recover from a …

The History And Development Of De-Swiddening Among The Ersu In Sichuan, China, Edwin A. Schmitt

HIMALAYA, the Journal of the Association for Nepal and Himalayan Studies

The process of coercing or forcing farmers to transition from shifting agriculture to more sedentary agricultural practices, a process I refer to as “de-swiddening”, has been well documented for many decades. Most often this process takes place in the political context of a state’s attempt to make an agricultural system more “legible”, as Scott (1998) has aptly described it. In a more recent context, de-swiddening has actually been taken under the banner of environmental protection. In both instances, institutional bodies which design de-swiddening policies rarely consider its unintended consequences. In China, to prevent erosion in upland regions of the country, …

Jackknife Empirical Likelihood Inference For The Pietra Ratio, Yueju Su

Mathematics Theses

Pietra ratio (Pietra index), also known as Robin Hood index, Schutz coefficient (Ricci-Schutz index) or half the relative mean deviation, is a good measure of statistical heterogeneity in the context of positive-valued data sets. In this thesis, two novel methods namely "adjusted jackknife empirical likelihood" and "extended jackknife empirical likelihood" are developed from the jackknife empirical likelihood method to obtain interval estimation of the Pietra ratio of a population. The performance of the two novel methods are compared with the jackknife empirical likelihood method, the normal approximation method and two bootstrap methods (the percentile bootstrap method and the bias corrected …

The Effects Of Visual Color Stimuli On Zebra Finch Behavior And Stress Response, Bao Chau Ly

Biology Honors Theses

The Australian Zebra Finch, Taeniopygia guttata, is a common vertebrate model for understanding behavioral, neurological, and physiological changes across the life span. The goal of this study was to determine if color in the environment can act as a stimulus and activate the zebra finch stress response. Zebra finches are diurnal and have color vision. Their plumage coloration is sexually dimorphic and they show behavioral changes to color; females prefer males with redder beaks, and both sexes show individual color preferences for materials in nest building. This experiment was conducted to test whether or not a novel color in the …

Effect Of Primary Care Physician Density On Late Stage Cervical Cancer Diagnosis, Emily Haanschoten

Theses and Dissertations

INTRODUCTION: Late-stage cervical cancer diagnosis is an important contributing factor to the cervical cancer mortality rate. Screening for cervical cancer is a vital tool in reducing the number of late-stage cases, preventing incident cases and reducing mortality. Access to care is often a significant barrier to receiving these services. Women who have no usual source of care report significantly lower percentages of Pap tests than women who have a usual source. South Carolina ranks 13th in the US in cervical cancer incidence and 7th in cervical cancer mortality. South Carolina also struggles with a primary care physician shortage, ranking 39th …

Climate-Induced Changes In The Germination Phenology Of Boechera Stricta, Samuel Johnson

Theses and Dissertations

Climate change is having demonstrable, worldwide impacts on ecological systems in ways that have modified aspects of organism behavior. Plant phenologies have responded to warmer temperatures in a variety of ways that may have implications for long-term species survival. How germination phenology changes in response to warmer climate is a largely unexplored question yet the ability of a plant to advance or delay germination in unfavorable conditions is critical for survival. Knowing the relative success and timing of germination under different climate regimes is important in understanding whether species can keep pace with the rate of climate change via migration …

Spatial Dynamics Of Vegetated Seascapes And The Influence On Fish And Crustaceans, Rolando O. Santos Corujo

Open Access Dissertations

My dissertation adopted concepts and spatial tools of seascape ecology, the marine counterpart of landscape ecology, to understand the broad-scale structural attributes that make submerged aquatic vegetation (SAV) seascapes resilient to anthropogenic disturbances, drivers of fauna community structure, and productive fisheries habitats. My research was designed to address the relative and interrelated ecological effects of broad-scale changes in SAV habitat amount (habitat loss) and configuration (fragmentation). SAV seascapes in nearshore areas of Biscayne Bay have been subject to constant anthropogenic disturbances associated to freshwater pulses from canals over the last 50 years; thus, these seascapes served as a model system …

A Phylogenetic Backbone For Bivalvia: An Rna-Seq Approach, Vanessa L. Gonzàlez, Sonia C. S. Andrade, Rudiger Bieler, Timothy M. Collins, Casey W. Dunn, Paula M. Mikkelsen, John D. Taylor, Gonzalo Giribet

All Faculty

Bivalves are an ancient and ubiquitous group of aquatic invertebrates with an estimated 10 000?20 000 living species. They are economically significant as a human food source, and ecologically important given their biomass and effects on communities. Their phylogenetic relationships have been studied for decades, and their unparalleled fossil record extends from the Cambrian to the Recent. Nevertheless, a robustly supported phylogeny of the deepest nodes, needed to fully exploit the bivalves as a model for testing macroevolutionary theories, is lacking. Here, we present the first phylogenomic approach for this important group of molluscs, including novel transcriptomic data for 31 …

A Comparison Of Community Composition Analyses For The Assessment Of Responses To Wood-Ash Soil Amendment By Free-Living Nematodes, Paul B.L. George

Electronic Thesis and Dissertation Repository

Land-use changes can have far-reaching consequences for resident communities and ecosystem functioning. Developing appropriate assessment methods to observe and quantify this change is an important application of community ecology. Here I compare four methods of community assessment for free-living soil nematodes under forest harvesting disturbance and wood ash application. Neither morphological assessment (richness, abundance, diversity) nor molecular assessment (morpho-richness using T-RFLP) was responsive to experimental treatments. Trait-based approaches (Maturity Index (MI) and Body Size Spectra (BSS)) were more sensitive to forest harvest and wood-ash amendment treatments. The efficacy of these methods was also qualitatively compared. Of all methods, the BSS …

Soil Respiration Patterns And Controls In Limestone Cedar Glades, Jennifer Cartwright, Dafeng Hui

Biology Faculty Research

Aims

Drivers of soil respiration (R s ) in rock outcrop ecosystems remain poorly understood. We investigated these drivers in limestone cedar glades, known for their concentrations of endemic plant species and for seasonal hydrologic extremes (xeric and saturated conditions), and compared our findings to those in temperate grasslands and semi-arid ecosystems.

Methods

We measured R s , soil temperature (T s ), volumetric soil water content (SWC), soil organic matter (SOM), soil depth, and vegetation cover monthly over 16 mo and analyzed effects of these variables on R s .

Results

Seasonally, R s primarily tracked T …

Avian Diversity Across Three Distinct Agricultural Landscapes In Guadalupe, Chiriquí Highlands, Panama, Jarred Jones

Independent Study Project (ISP) Collection

Deforestation of tropical forest for agricultural purposes threatens habitat loss of native species. The value of various agricultural landscapes in conserving avian populations is useful in determining diversity-conscious development plans. However, generalized results from regionalscale studies cannot be implemented to insular avian habitats. This study serves as the only current avian diversity study of the Chiriquí Highlands. To determine the effect of agricultural land use within an insular avian habitat, I compared avian diversity and site population similarity in Guadalupe, Chiriquí Highlands of the Talamanca Range, Panama. I hypothesized that avian diversity is greatest at forest edge followed by forest …

The Unseen World: Environmental Microbial Sequencing And Identification Methods For Ecologists, Naupaka Zimmerman, Jacques Izard, Christian Klatt, Jizhong Zhou, Emma Aronson

Department of Food Science and Technology: Faculty Publications

Archaea, bacteria, microeukaryotes, and the viruses that infect them (collectively “microorganisms”) are foundational components of all ecosystems, inhabiting almost every imaginable environment and comprising the majority of the planet’s organismal and evolutionary diversity. Microorganisms play integral roles in ecosystem functioning; are important in the biogeochemical cycling of carbon (C), nitrogen (N), sulfur (S), phosphorus (P), and various metals (eg Barnard et al. 2005); and may be vital to ecosystem responses to large-scale climatic change (Mackelprang et al. 2011). Rarely found alone, microorganisms often form complex communities that are dynamic in space and time (Martiny et al. 2006). For these and …

The Influence Of Salt Marsh Fucoid Algae (Ecads) On Sediment Dynamics Of Northwest Atlantic Marshes, M. C. Tyrrell, Carol S. Thornber, J. A. Burkhardt, M. Congretel

Biological Sciences Faculty Publications

Resilience is currently a key theme within salt marsh ecological studies. Understanding the factors that affect salt marsh accretion and elevation gains are of paramount importance if management of these ecosystems is to be successful under increasing synergistic stresses of storm surge, inundation period, and eutrophication. We present the results of salt marsh fucoid algae (ecads) removal experiments on Spartina alterniflora abundance, production and decomposition and the sedimentary dynamics of two marshes on Cape Cod, Massachusetts. The presence of the thick layer of marsh fucoids had a significant and positive influence on sediment deposition, accretion, concentration of water column particulates, …

Health Professionals’ Roles In Animal Agriculture, Climate Change, And Human Health, Aysha Z. Akhtar, Michael Greger, Hope Ferdowsian, Erica Frank

Michael Greger, MD, FACLM

What we eat is rapidly becoming an issue of global concern. With food shortages, the rise in chronic disease, and global warming, the impact of our dietary choices seems more relevant today than ever. Globally, a transition is taking place toward greater consumption of foods of animal origin, in lieu of plantbased diets. With this transition comes intensification of animal agriculture that in turn is associated with the emergence of zoonotic infectious diseases, environmental degradation, and the epidemics of chronic disease and obesity. Health professionals should be aware of these trends and consider them as they promote healthier and more …

Toward Understanding The Physiological Determinants Of Microbial Competitiveness In Methanogenic Processes, Si Chen

Doctoral Dissertations

Methanogenesis is of great significance in both natural and engineered processes. Anaerobic digestion technology represents the engineering-scale implementation of methanogenesis in waste treatment processes. Despite the broad application of anaerobic digestion as a common waste treatment option, much remains to be learned on the anaerobic food web underlying methanogenesis for more effective process modeling and control.

Following an initial screening of various substrates, six continuous lab-scale anaerobic digesters were developed with animal waste as the substrate. The linkage between microbial community composition and process performance was studied by initiating process imbalance with organic overloading. As a result, accumulation of short …

Benthic Macroinvertebrates In Uvas Creek, California, Downstream Of A Reservoir, Carole Ann Foster

Master's Theses

I sampled macroinvertebrates in May, July, and October 2008 in Uvas Creek, a reservoir-regulated stream in south Santa Clara County, California, to assess what factors (including canopy closure, turbidity, and stream flow) downstream of the reservoir were related to food availability for rearing juvenile Steelhead (Oncorhynchus mykiss). I found benthic and drifting macroinvertebrate biomass was considerably greater during most months in the more open-canopied two sites in the downstream reach as compared to the densely shaded, more turbid and silty two sites in the upstream reach. Abundance of important drifting aquatic invertebrates in May (chironomids, simuliids, and baetids) was proportional …

Trophic Dynamic Interactions In A Temperate Karst River, Elizabeth Malloy

Masters Theses & Specialist Projects

Surface streams in karst landscapes are often characterized by high nutrient levels due to incomplete filtration through series of innumerable, below-ground conduits. Seasonal growth of the filamentous alga, Cladophora, is typically associated with nutrient-rich waters. This research compared macroinvertebrate food web structure between riverine reaches with contrasting underlying karst topography, nutrient levels, and Cladophora cover during summer 2012 and autumn 2013. Recent work in these reaches found a high correlation between Cladophora cover and nutrient content, particularly nitrate. Four questions were addressed during this study: 1. Do longitudinal trends in algal and consumer δ13C values relate to decreased DIC availability …

Geographic Assessment Of The Perception Of Nature Reserves And National Parks In Kuwait, Meshari S. Alenezi

Graduate Theses and Dissertations

The Arabian Gulf countries have passed strict laws to preserve their environment. Kuwait has a strong history with preserving natural areas. The ecological value and richness of Kuwait's ecosystems have increased since the nature reserves were built. This research has evaluated the perceptions that Kuwaitis have of the design, creation, and development of nature reserves in Kuwait. It involved the use of survey instruments (questionnaires) and interviews with respondents of both urban and rural communities. Data from these surveys and interviews analyzed regarding perceptions of nature reserves' needs, sizes, functions, and future plans.

The results of examinations (surveys) demonstrate that …

The Potential Of Exogenous Fatty Acids In Breast Tissue Engineering, Richard Thomas Pace

All Dissertations

More than 200,000 women are diagnosed with breast cancer each year in the United States, where the majority will undergo a lumpectomy procedure and then radiotherapy as preventative treatment. Both artificial and tissue transplants may obscure the detection of cancer recurrence or limit the effectiveness of radiation treatment. Previous research in our laboratory has been performed to develop injectable lumpectomy void fillers. This body of work seeks to continue and further develop the technology of the void fillers and further investigate the potential of fatty acids in breast tissue engineering.

Literature suggests that lipid peroxidation products from free fatty acids …

The Vascular Flora Of Steele Creek Park And A Quantitative Study Of Vegetation Patterns In Canopy Gaps, Sullivan County, Tennessee, Phillip C. Klahs

Electronic Theses and Dissertations

An inventory of vascular plants was conducted in Steele Creek Park in Sullivan County, Tennessee from March 2013 to September 2014. The park covers an area of 892 ha and lies within the Ridge and Valley Province. The inventory of vascular plants documented 547 species of 323 genera and 101 families. Two hundred sixteen taxa were newly reported for Sullivan County. Tennessee Special Concern Species included Cardamine rotundifolia, Castanea dentata, Lonicera dioica, Allium tricoccum, Cypripedium acaule, and Panax quinquefolius. A single species, Juglans cinerea L., is considered a Tennessee Threatened Species. Vegetation patterns were studied quantitatively by installing 10 …

Keeping In Touch: Exchange As An Adaptive Strategy In Southern Nevada, Timothy Joshua Ferguson

UNLV Theses, Dissertations, Professional Papers, and Capstones

Archaeologists have always wondered about the extent of vessel movement in the American Southwest. Identifying vessel movement allows for the study of social interactions across a region and the role of ceramics in the adaptive processes of agriculturalists living in marginal, highly variable environments. In many instances, exchange may act as a way to reduce the risk of resource shortfalls by creating social ties in other areas. This research investigated the changing risk reduction strategies of households in the lowland Virgin region of southern Nevada by using geochemical methods to trace the exchange of locally produced pottery. It was hypothesized …

A Review Of Software For Analyzing Molecular Sequences, Haema Nilakanta, Kimberly L. Drews, Suzanne Firrell, Mary A. Foulkes, Kathleen A. Jablonski

GW Biostatistics Center

Background Over the past ten years, there has been an explosion of microbiome research. Many software packages for analyzing microbial sequences such as the 16S gene from 454 sequencers and Illumina platforms are available. But for a new researcher, it is difficult to know which package to choose. We present a systematic review of packages for the analysis of molecular sequences used to describe and compare microbial communities. This review gives students and researchers information to help choose the best analytic pipeline for their project. To the best of our knowledge, this is the first review of such software.

Findings …

Tcwp Newsletter No. 318, Tennessee Citizens For Wilderness Planning

Tennessee Citizens for Wilderness Planning Newsletters

No abstract provided.

Movements And Conservation Of The Migratory White-Eared Kob (Kobus Kob Leucotis) In South Sudan, Malik D. Marjan

Doctoral Dissertations

The annual movements of white-eared kob (Kobus kob leucotis), tiang (Damaliscus korrigum tiang), in eastern South Sudan was investigated to provided appropriate information for developing effective conservation actions for the migratory kob. Although kob is the focus of the study tiang has been included as the two migrations are ecologically linked and overlap at least in the wet season. During the 20 years of the civil war which ravaged South Sudan, the kob and tiang populations were thought to be severely hunted for food by both the combatants and local people to the extent that their …

Integrated Modeling Of Land Use And Climate Change Impacts On Multiscale Ecosystems Of Central African Watersheds, Simon Nampindo

Doctoral Dissertations

Assessment and management of ecosystem services demands diverse knowledge of the system components. Land use change occurring mainly through deforestation, expansion of agriculture and unregulated extraction of natural resources are the greatest challenges of the Congo basin and yet is central to supporting over 100 million people. This study undertook to implement an integrated modeling of multiscale ecosystems of central African watersheds and model the impact of anthropogenic factors on elephant population in Greater Virunga landscape. The study was conducted at varied scales, regional, landscape, and community. Regional study included watershed analysis and hydrological assessment using remotely sensed data implemented …

Landscape Predictors Of Current And Future Distribution Of Mountain Gorillas (Gorilla Beringei Beringei) In Bwindi Impenetrable National Park, Uganda, Dennis Babaasa

Doctoral Dissertations

Context: The impacts of ecological, anthropogenic and future climate change on the distribution of wild mountain gorillas (Gorilla beringei beringei) are of ongoing concern. Knowing the factors that determine gorilla habitat suitability now and in future is essential for conservation planning. The mountain gorilla is recognized by IUCN Red Data Book as critically endangered and a great tourist attraction. However, the factors that impact on their spatial use of Bwindi are poorly understood. Aims: I aimed at determining the major factors that determine gorilla distribution, predict the wild gorilla habitat suitability and establish the vulnerability index …

Habitat Use Of The Key Largo Woodrat (Neotoma Floridana Smalli), Lauren J. Barth

FIU Electronic Theses and Dissertations

Key Largo woodrats are an endangered subspecies with an extremely limited habitat. This study sought to understand woodrat habitat preferences in order to guide management. Woodrats build stick nests from natural and artificial materials, so nest distribution and nest occupancy were used as indicators of preference. Distribution was determined by nest surveys, and remote cameras were used to assess occupancy. Forest structure, human disturbance, nest, and animal presence metrics were also collected. More nests were found along abandoned roads than along forest transects and more artificial nests were occupied than natural nests. These findings indicate that woodrats prefer areas with …

Short- And Long-Term Trends In Ecological Interactions: From Predator-Prey Interactions To Phanerozoic Diversification, Subhronil Mondal

USF Tampa Graduate Theses and Dissertations

During the last two decades, a broad spectrum of short- and long-term studies on different taxonomic groups has enriched our understanding about how dynamics of taxonomic and ecological diversification have changed through geologic time. There are two major issues that have impacted these studies: the quality and quantity of data used are often insufficient in various ways and the methods used may produce results that are more equivocal than supposed. To investigate these issues more fully, this dissertation focuses on studies on two major aspects: 1) short-term studies examining the nature of successful and unsuccessful predatory attacks on Plio-Pleistocene bivalves; …

Statistical Analysis And Modeling Of Pm2.5 Speciation Metals And Their Mixtures, Boubakari Ibrahimou

USF Tampa Graduate Theses and Dissertations

Exposure to fine particulate matter (PM_2.5) in the ambient air is associated with various health effects. There is increasing evidence which implicates the central role played by specific chemical components such as heavy metals of PM_2.5. Given the fact that humans are exposed to complex mixtures of environmental pollutants such as PM_2.5, research efforts are intensifying to study the mixtures composition and the emission sources of ambient PM, and the exposure-related health effects. Factor analysis as well source apportionment models are statistical tools potentially useful for characterizing mixtures in PM_2.5. However, classic …