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- Connectivity (2)
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- Age Determination (1)
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Articles 1 - 28 of 28
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Spatiotemporal Variation Of Avian Populations Within Geographically Isolated Freshwater Marshes, Brian Rodenbeck
Spatiotemporal Variation Of Avian Populations Within Geographically Isolated Freshwater Marshes, Brian Rodenbeck
Electronic Theses and Dissertations
Metacommunity connectivity, i.e., multi-species dispersal events, is vital to metapopulation persistence in patchy landscapes. Assessments of metacommunity connectivity are not trivial. However, a relationship between trophic rank and the species-area relationship has been found in previous studies, allowing for the use of the predator species-area relationship to act as a surrogate measure of actual metacommunity connectivity of prey species in some systems. For this study, avian species were selected as they are generalist top predators within the study system. Predator species richness within geographically isolated freshwater marshes is influenced by a number of factors. I explore the relative roles of …
Tree Calls Of Three Treefrogs (Hyla Femoralis, H. Gratiosa, And H. Squirella): Analysis Of Environmental, Behavioral, And Acoustic Characteristics, Kristine Schad
Electronic Theses and Dissertations
Male frogs typically call near water at dusk to attract females for breeding. During the breeding season, male treefrogs also emit diurnal "tree calls" or "rain calls" from the tops of trees. Very little is known about tree calls, although many treefrogs use them. Tree calls may be used to attract females, deter males or be triggered by weather conditions favorable for breeding: high temperature and relative humidity, and a drop in barometric pressure. As dusk approaches, male treefrogs continue tree calls from lower in the trees, and if conditions are favorable, jump to the ground and travel to a …
Identification Of Genes Encoding Acyl-Coa Reductases And Aldehyde Reductases In Mycobacterial Genome By Characterization Of The Reductases Expressed In E. Coli, Harminder Singh
Electronic Theses and Dissertations
Mycobacterium tuberculosis has been long known to produce wax esters. However, the enzymes involved in their biosynthesis have not been identified. Here we report the identification of Rv3391 and Rv1543 as genes that encode fatty acyl-CoA reductases and Rv1544 as one that encodes an aldehyde reductase. When expressed in E.coli, the products of Rv3391 and Rv1543 catalyzed reduction of fatty acyl-CoA to fatty alcohol with the corresponding aldehyde as an intermediate with an optimal pH of 7.0. Both enzymes showed a strong preference for NADPH over NADH as a reductant. Apparent Km for NADPH was 38 [micro]M for Rv3391 product …
Characterization Of Pigment Cell Specific Genes In The Sea Urchin Embryo (Strongylocentrotus Purpuratus), Tricia Stephens
Characterization Of Pigment Cell Specific Genes In The Sea Urchin Embryo (Strongylocentrotus Purpuratus), Tricia Stephens
Electronic Theses and Dissertations
In sea urchin development, cell fate specification appears by the 60-cell stage embryo when several embryonic territories are recognized: the small micromeres, the large micromeres which will generate primary mesenchyme cells, the vegetal2 layer that will give rise to pigment cells, immunocytes, and muscle cells, the vegetal1 layer, as well as the oral and aboral ectoderm. A Delta-Notch signaling event is required for the differential specification of mesodermal cells that will give rise to secondary mesenchyme cells (SMCs). SMCs produce four cell types: pigment cells, blastocoelar cells, circumesophageal muscle cells, and coelomic pouch cells. Pigment cells are the first to …
Responses Of Small Rodents To Restoration And Management Techniques Of Florida Scrub At Cape Canaveral Air Force Station, Florid, Alexis Suazo
Electronic Theses and Dissertations
Proper habitat management is essential for the survival and reproduction of species, especially those listed under state or federal laws as endangered, threatened or of special concern, and those with small local populations. Land managers use a combination of mechanical cutting and prescribed burning to manage and restore degraded scrub habitat in east central Florida. This approach improves habitat for the endangered Florida scrub-jay (Aphelocoma coerulescens), but little is known about its effects on other taxa, especially the threatened southeastern beach mouse (Peromyscus polionotus niveiventris). This single species approach may not be beneficial to other taxa, and mechanical cutting and …
The Effects Of Trivalent Arsenicals And Thioredoxin Reductase Inhibitors On Selenium Metabolism In Lung Cell Culture Models, Sarah Ryann Talbot
The Effects Of Trivalent Arsenicals And Thioredoxin Reductase Inhibitors On Selenium Metabolism In Lung Cell Culture Models, Sarah Ryann Talbot
Electronic Theses and Dissertations
Arsenic exposure, through various routes, is associated with the development of cancer of the skin, lung, liver, kidney, and bladder. Treatment of cells in culture with trivalent arsenicals has been shown to increase reactive oxygen species (ROS). In particular, monomethylarsonous acid (MMAIII), a trivalent metabolite of arsenite, is highly cytotoxic and possibly carcinogenic. Three trivalent arsenicals; arsenite, arsenic trioxide (ATO), and MMAIII, are also known inhibitors of the selenoprotein thioredoxin reductase (TrxR). Selenium, an essential micronutrient in mammals, is needed in the form of selenocysteine for activity of this enzyme and other selenoproteins. TrxR is part of a key component …
Physical Characteristics Of An Individual: The Identification Of Biomarkers For Biological Age Determination, Michelle Alvarez
Physical Characteristics Of An Individual: The Identification Of Biomarkers For Biological Age Determination, Michelle Alvarez
Electronic Theses and Dissertations
It is now a matter of routine for the forensic scientist to obtain the genetic profile of an individual from DNA recovered from a biological stain deposited at a crime scene. Potential contributors of the stain must either be known to investigators (i.e. a developed suspect) or the questioned profile must be searched against a database of DNA profiles such as those maintained in the CODIS National DNA database. However, in those instances where there is no developed suspect and no match is obtained after interrogation of appropriate DNA databases, the DNA profile per se presently provides no meaningful information …
Stabel Isotope Turnover Rates And Diet-Tissue Discrimination In The Skin Of West Indian Manatees: Implcations For Evaluating Their Feeding Ecology And Habitat Use, Christy Alves
Electronic Theses and Dissertations
The West Indian manatee (Trichechus manatus) is an herbivorous marine mammal that occupies freshwater, estuarine, and marine habitats. Despite being considered endangered, relatively little is known about the feeding ecology of either of the two recognized subspecies, the Florida manatee (T.m. latirostris) and Caribbean or Antillean manatee (T.m. manatus). A better understanding of their respective feeding preferences and habitat use is essential to establish criteria on which conservation plans can be based. The present study expands on previous work on manatee feeding ecology by both assessing the application of stable isotope analysis to manatee tissue and providing critical baseline parameters …
Individual Identification Of Polar Bears By Whisker Spot Patterns, Carlos Anderson
Individual Identification Of Polar Bears By Whisker Spot Patterns, Carlos Anderson
Electronic Theses and Dissertations
Many types of ecological studies require identification of individual animals. I developed and evaluated an automated identification system for polar bears (Ursus maritimus) based on their whisker spot patterns. First, I measured the reliability of using whisker spot patterns for identification from polar bear photographs taken in western Hudson Bay. This analysis involved estimating the complexity of each whisker spot pattern in terms of its information content. I found that 98% of patterns contained enough information to be reliable, and this result varied little among three different observers. Based on these results, I implemented a computer-aided identification system for polar …
Restoration Of Intertidal Oyster Reefs Affected By Intense Recreational Boating Activity In Mosquito Lagoon, Florida, Andrea Barber
Restoration Of Intertidal Oyster Reefs Affected By Intense Recreational Boating Activity In Mosquito Lagoon, Florida, Andrea Barber
Electronic Theses and Dissertations
In recent years, intertidal reefs of Crassostrea virginica (eastern oyster) along central Florida's east coast have suffered extensive losses due to wakes from recreational boats. These wakes have caused extensive shell movement and sediment resuspension which results in large piles of disarticulated shells along the seaward edges of reefs. Dead margins extend up to one meter above mean high water. The creation and enforcement of "no wake" zones in the area are unlikely. Thus, there is an urgent need for an alternative restoration strategy before these oyster reefs decline any further. The goal of this project was to develop a …
Correlation Of Rpob Gene Mutation With Clinical Rifabutin And Rifampicin Resistance For Treatment Of Crohn's Disease, Daniel Beckler
Correlation Of Rpob Gene Mutation With Clinical Rifabutin And Rifampicin Resistance For Treatment Of Crohn's Disease, Daniel Beckler
Electronic Theses and Dissertations
Emerging rise in microbial drug resistance and the slow-growing characteristic of some intracellular pathogens such as MAP (Mycobacterium avium subspecies paratuberculosis) strongly urges the need for an effective approach for unconventional drug susceptibility testing. We designed a molecular-based PCR method for the evaluation of rifabutin (RFB) and rifampicin (RIF) resistance based on probable determinant regions within the rpoB gene of MAP, including the 81 bp variable site located between nucleotides 1363 and 1443. The minimum inhibitory concentration (MIC) for RIF was also determined against 10 MAP isolates in attempt to seek correlation with rpoB sequences. We determined that MAP strain …
Effects Of Isolation On Metapopulation Dynamics In Small-World Networks, Alaina Brooke Bernard
Effects Of Isolation On Metapopulation Dynamics In Small-World Networks, Alaina Brooke Bernard
Electronic Theses and Dissertations
Simulation models are valuable for making predictions that may be tested in natural systems and for understanding observed patterns. The simulation model developed for this thesis evaluates the effects of spatial network architecture, including organism dispersal patterns and isolation of habitats, on metapopulations. Two fields were merged throughout this project: metapopulation biology and small-world network theory. Small-world networks are characterized in their extremes as scale-free or single-scale. These models potentially simulate the networks of habitats and corridors in which metapopulations operate. Small-world network theory has been used to describe systems as diverse as rivers, the world-wide-web, and protein interactions, but …
Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference, Todd Castoe
Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference, Todd Castoe
Electronic Theses and Dissertations
The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. We develop and test a novel framework for applying complex models of nucleotide evolution to solve phylogenetic and comparative genomic problems, and demonstrate that these techniques are crucial for accurate comparative evolutionary inferences. Additionally, we conduct an exploratory study using vertebrate mitochondrial genomes as a model …
Mechanism Of Action And Regulation Of Membrane Serine Protease Prostasin In The Prostate And Prostate Cancer, Mengqian Chen
Mechanism Of Action And Regulation Of Membrane Serine Protease Prostasin In The Prostate And Prostate Cancer, Mengqian Chen
Electronic Theses and Dissertations
The glycosylphosphatidylinositol (GPI)-anchored serine protease prostasin (PRSS8) is expressed at the apical membrane surface of epithelial cells and acts as a suppressor of tumor invasion when re-expressed in highly invasive human prostate and breast cancer cell lines. To better understand the molecular mechanisms underlying the anti-invasion phenotype associated with prostasin re-expression in prostate cancer cells, we expressed wild-type human prostasin or a serine active-site mutant prostasin in the PC-3 human prostate carcinoma cells. Molecular changes were measured at the mRNA and the protein levels. The expression of several invasion-promoting molecules is regulated by prostasin re-expression, mediated by a protein-level down-regulation …
A Member Of The Novel Fikk Family Of Plasmodium Falciparum Putative Protein Kinases Exhibits Diacylglycerol Kinase Activity And Is Exported To The Host Erythrocyte, David Floyd Curtis
A Member Of The Novel Fikk Family Of Plasmodium Falciparum Putative Protein Kinases Exhibits Diacylglycerol Kinase Activity And Is Exported To The Host Erythrocyte, David Floyd Curtis
Electronic Theses and Dissertations
Plasmodium falciparum is one of four species known to cause malaria in humans and is the species that is associated with the most virulent form of the disease. Malaria causes nearly two million deaths each year, many of these occurring among children in under-developed countries of the world. One reason for this is the prevalence of drug resistant strains of malaria that mitigate the efficacy of existing drugs. Hence, the identification of a new generation of pharmacological agents for malaria is extremely urgent. The recent identification of a group of novel protein kinases within the Plasmodium falciparum genome has provided …
Trophic Status Of A Small Mammal Assemblage On Cape Canaveral Air Force Station With An Emphasis On Peromyscus Polionotus Niveiv, Megan Keserauskis
Trophic Status Of A Small Mammal Assemblage On Cape Canaveral Air Force Station With An Emphasis On Peromyscus Polionotus Niveiv, Megan Keserauskis
Electronic Theses and Dissertations
Successful translocation of a listed species into an area of previous occupation requires knowledge of the habitat needs. The presence of the necessary food items is critical to the successful establishment of a new population; this information is unknown for Peromyscus polionotus niveiventris, the southeastern beach mouse, a threatened subspecies on the east coast of Florida. I used fecal and stable isotope analysis to determine the diet of this subspecies at Cape Canaveral Air Force Station, Brevard County, Florida, between the autumn of 2003 and the spring of 2005. Six trapping grids were established, three in the dune/swale and three …
The Generation And Scavenging Of Radicals Via Cerium And Nanoceria, Eric Glenn Heckert
The Generation And Scavenging Of Radicals Via Cerium And Nanoceria, Eric Glenn Heckert
Electronic Theses and Dissertations
Cerium is the most abundant of the rare earth metals, found on average at a level of 66 parts per million in the earth's crust. The unique redox properties of cerium and cerium oxide nanoparticles have led to its use in a wide variety of industrial and commercial uses such as oxygen sensors, fertilizers and as a catalyst to remove toxic gases in automobile exhaust. The use of cerium has also garnered interest in the nanotechnology field. Nanoceria has been generated in its oxide form as nanoparticles and nanorods. Recently, nanoceria has been shown to protect against oxidative stress in …
Seasonal And Diel Patterns Of Manatee Habitat Use, Monica Ann Ross
Seasonal And Diel Patterns Of Manatee Habitat Use, Monica Ann Ross
Electronic Theses and Dissertations
State and Federal agencies have created sanctuaries and speed zones to help reduce manatee mortality while incorporating the recreational and commercial resource needs of these same habitats for humans. Specific habitat resources are considered necessary to increase manatee survivorship. We have only recently begun to address how manatees use some of these resources based on physiological or reproductive strategies. In this study, I quantified patterns of habitat use during seasonal and diel periods for different sex and reproductive manatee classes using data from a radio-telemetry study conducted by the Florida Fish and Wildlife Conservation Commission during 1991-1996. I used five …
Mechanisms Promoting Phosphorylation Of The Nf2 Tumor Suppressor And Its Effects On Schwann Cell Development, Courtney Lynn Thaxton
Mechanisms Promoting Phosphorylation Of The Nf2 Tumor Suppressor And Its Effects On Schwann Cell Development, Courtney Lynn Thaxton
Electronic Theses and Dissertations
Neurofibromatosis type 2 is an autosomal dominant disease characterized by the formation of schwannomas and other peripheral neuropathies. The nf2 gene encodes the protein Schwannomin, or merlin. Schwannomin (Sch) is a membrane-cytoskeletal linking protein that suppresses cell proliferation at high cell density and modulates cell shape. Sch's tumor suppressive activity is regulated by its localization, conformation, and phosphorylation at serine 518 (S518). Sch's localization is dependent on binding the scaffold protein, paxillin. Phosphorylation of Sch at S518 regulates its conformation and tumor suppressor function. In a negative feedback loop, unphosphorylated Sch restricts cell proliferation downstream of Rac and p21-activated kinase …
Genetic And Phenotypic Evolution In The Ornate Chorus Frog (Pseudacris Ornata): Testing The Relative Roles Of Natural Selection,, Jacob Degner
Electronic Theses and Dissertations
Understanding how migration, genetic drift, and natural selection interact to maintain the genetic and phenotypic variation we observe in natural populations is a central goal of population genetics. Amphibians provide excellent model organisms for investigating the interplay between these evolutionary forces because amphibians are generally characterized by limited dispersal abilities, high philopatry, and are obligately associated with the areas around suitable habitats (e.g. breeding ponds). Thus, on relatively small geographic scales, the relative effects of all of these evolutionary forces can be studied together. Here, we study the interaction of migration, genetic drift, natural selection, and historical process in the …
Sex-Biased Parasitism And The Reproductive Costs Of Parasites In A Social African Ground Squirrel, Melissa Ann Hillegass
Sex-Biased Parasitism And The Reproductive Costs Of Parasites In A Social African Ground Squirrel, Melissa Ann Hillegass
Electronic Theses and Dissertations
Vertebrate males frequently carry higher numbers of parasites than females. This bias in parasite loads could be a consequence of sexual selection. Grouping species are also assumed to be afflicted with larger numbers of parasites than solitary animals and associated costs of this parasitism could vary with group size or structure. I examined sex-biased parasitism and the influence of group size on parasite loads in Cape ground squirrels (Xerus inauris), a highly social species that occurs in the arid regions of southern Africa. Males carried three times as many ectoparasites as females, but females harbored nearly three times more endoparasites …
Demographic Consequences Of Managing For Florida Scrub-Jays (Aphelocoma Coerulescens) On An Isolated Preserve., Casey Lyon
Electronic Theses and Dissertations
Many species naturally occupy discrete habitat patches within a mosaic of habitats that vary in quality. The Florida scrub-jay (Aphelocoma coerulescens) is endemic to Florida scrub, a habitat that is naturally patchy and greatly reduced in area over recent decades owing to development and urbanization. Because of this habitat loss, future management of Florida scrub-jays will focus on smaller, fragmented tracts of land. My study examines such a tract, Lyonia Preserve, southwest Volusia County, FL. This preserve was unoccupied by scrub-jays prior to habitat restoration. The preserve is now frequently managed exclusively for scrub-jays as a habitat island surrounded by …
Glutamate Excitotoxicity In Epilepsy And Ischemia, Mangala Meenakshi Soundarapandian
Glutamate Excitotoxicity In Epilepsy And Ischemia, Mangala Meenakshi Soundarapandian
Electronic Theses and Dissertations
'Excitotoxicity' represents the excitatory amino acid mediated degeneration of neurons. Glutamate is the major excitatory neurotransmitter in the brain. Glutamate excitotoxicity has been implicated in a number of neurodegenerative disorders like Stroke, Epilepsy, Alzheimer's disease and traumatic brain injury. This neurotoxicity is summed up by the 'glutamate hypothesis' which describes the cause of neuronal cell death as an excessive release of glutamate causing over excitation of the glutamate receptors and subsequent increase in influx of calcium leading to cell death. An effort to counteract this neurotoxicity has lead to the development of glutamate receptor antagonists that can effectively serve as …
Lim Kinase 1 Modulates Expression Of Matrix Metalloproteinases And Associates With Gamma-Tubulin: Dual Role In Invasion And Mito, Tenekua Tapia
Lim Kinase 1 Modulates Expression Of Matrix Metalloproteinases And Associates With Gamma-Tubulin: Dual Role In Invasion And Mito, Tenekua Tapia
Electronic Theses and Dissertations
LIM kinase 1 (LIMK1) is a unique dual specificity serine/threonine kinase containing two N-terminal LIM domains in tandem, a PDZ domain and a C-terminal catalytic domain. LIMK1 is involved in modulation of actin cytoskeleton through inactivating phosphorylation of the ADF (actin depolymerization factor) family protein cofilin. Recent studies have shown that LIMK1 is upregulated in breast and prostate cancer cells and tissues, promotes metastasis in animals and induces acquisition of an invasive phenotype when ectopically expressed in benign prostate epithelial (BPH) cells. Furthermore, overexpression of LIMK1 was associated with altered sub cellular localization of the membrane type 1 matrix metalloprotease …
Helical Packing Regulates Structural Transitions In Bax, Nuska Tschammer
Helical Packing Regulates Structural Transitions In Bax, Nuska Tschammer
Electronic Theses and Dissertations
Apoptosis is essential for development and the maintenance of cellular homeostasis and is frequently dysregulated in disease states. Proteins of the BCL-2 family are key modulators of this process and are thus ideal therapeutic targets. In response to diverse apoptotic stimuli, the pro-apoptotic member of BCL-2 family, BAX, redistributes from the cytosol to the mitochondria or endoplasmic reticulum and primes cells for death. The structural changes that enable this lethal protein to transition from a cytosolic form to a membrane-bound form remain poorly understood. Elucidating this process is a necessary step in the development of BAX as a novel therapeutic …
Does Habitat Affect Clonal Demography? An Experiment With Polygonella Myriophylla In Roadside And Florida Scrub, Kristina Dianne Horn
Does Habitat Affect Clonal Demography? An Experiment With Polygonella Myriophylla In Roadside And Florida Scrub, Kristina Dianne Horn
Electronic Theses and Dissertations
Polygonella myriophylla (Polygonaceae) is a clonal shrub listed as endangered and narrowly endemic to pyrogenic scrub ecosystems in central Florida. It is almost restricted to gaps within the matrix of shrubs in the scrub but also occurs along adjacent road-side habitats. I hypothesize that persistent disturbed microhabitats and more dynamic sand accretion in roadsides will increase rooting probabilities compared to more stable scrub habitats, affecting survival, growth and reproduction. In April 2004- March 2006, I compared plant (genet) and basal branch (ramet) performance between experimentally manipulated plants in native scrub and roadside habitats at two locations within the Lake Wales …
Life History And Reproductive Biology Of Clitoria Fragrans Relative To Fire History On The Avon Park Air Force Range, Michelle Nicole Lewis
Life History And Reproductive Biology Of Clitoria Fragrans Relative To Fire History On The Avon Park Air Force Range, Michelle Nicole Lewis
Electronic Theses and Dissertations
The southeastern coastal plain of the United States is a center of endemism for plants in temperate North America and second only to California among the states. In the southeast, Florida has the largest number of these endemic plants. The largest number of these Florida endemics can be found in the fire maintained scrub and sandhill communities located on sandy ridges in Central Florida. One such endemic is Clitoria fragrans, a rare perennial herb. C. fragrans reproduces via a mixed mating system. It produces both open, chasmogamous flowers and closed, selfed, cleistogamous flowers. Little else is known about its biology. …
Retrocyclin Rc-101 Overcomes Cationic Mutations On The Heptad Repeat 2 Of Hiv-1 Gp41, Christopher Fuhrman
Retrocyclin Rc-101 Overcomes Cationic Mutations On The Heptad Repeat 2 Of Hiv-1 Gp41, Christopher Fuhrman
Electronic Theses and Dissertations
Retrocyclin RC-101, a θ-defensin with lectin-like properties, potently inhibits infection by many HIV-1 subtypes by binding to the heptad repeat (HR)-2 region of gp41 and preventing six-helix bundle formation. In the present study, we used in silico computational exploration to identify residues of HR2 that interacted with RC-101 and then analyzed the HIV-1 Sequence Database at LANL for residue variations in the HR1 and HR2 segments that could plausibly impart in vivo resistance. Docking RC-101 to gp41 peptides in silico confirmed its strong preference for HR2 over HR1, and implicated residues crucial for its ability to bind HR2. We mutagenized …