Digital Commons Network^™

A Comparative Study Of Biocrusts On Gypsum And Non-Gypsum Soils In The Northern Chihuahuan And Eastern Mojave Deserts, Usa: Biocrust Mosses Respond To Soil, Environmental, And Climatic Conditions, Katelyn Gobbie

Masters Theses

Biological soil crust communities (biocrusts) growing on gypsum soils have been well- documented for their prolific appearance and rich diversity of lichens and bryophytes. However, studies characterizing gypsum biocrusts have primarily occurred outside of the U.S., most of which lack comparisons to other soil types. We conducted intensive field surveys to evaluate the cover and frequency of biocrust functional groups and moss species on gypsum and non-gypsum soils in the U.S. regions with the most extensive gypsum outcrops, the northern Chihuahuan and eastern Mojave Deserts. We employed canonical correspondence analysis (CCA) to relate the observed differences in biocrust abundance and …

Use Of Thermal Microhabitats By Herpetofauna In A Fragmented Rainforest Landscape In Colombia, Catalina Valderrama

Masters Theses

No abstract provided.

To Melt, Huanzhe Hu

Masters Theses

This thesis focuses on the need for a reevaluation of the relationship between humans and nature in the face of the current ecological crisis. The author argues that the dominant anthropocentric orientation, which sees nature as a resource to be exploited for human benefit, has led to over extraction and resource abuse, disrupting the balance of ecosystems. Instead, the author suggests adopting an ethical framework based on mutual understanding and appreciation, breaking the "hunter's gaze" and fostering empathy for non-human life forms. This thesis also explores the potential for new forms of communication and engagement with nature, such as through …

Fungi In Flux | Designing Regenerative Materials And Products With Mycelium, Arvind Bhallamudi

Masters Theses

As the world grapples with the escalating crisis of climate threats and environmental degradation, this research delves into the synergistic potential of design and biology, developing safe and sustainable materials for applications in prototyping, furniture and interior design. Harnessing the power of a unique organism - fungi, the study proposes an accessible, efficient, and resilient material resource system. It utilizes local waste streams and mycelium (the vegetative part of fungi) to grow functional structures. An experimental and small-scale protocol is modeled by testing bio-fabrication and bio-printing methods. The composites' performance qualities and characteristics are evaluated through mechanical testing and a …

Evaluation Of Acoustic Telemetry Array Performance And Fine- Scale And Broad-Scale Spatial Movement Patterns For Coral Reef Species In Culebra, Puerto Rico, Roxann Cormier

Masters Theses

Acoustic telemetry is an important tool when studying the spatial ecology of marine animals. First, it is important to identify the challenges of using this tool in shallow tropical marine environments before tracking marine animals. One significant issue that can influence the effectiveness of acoustic telemetry is the efficiency or detectability of acoustic signals by receivers. Understanding factors influencing detection efficiency of acoustic tags is especially important for fine-scale positioning systems (such as the VEMCO positioning system, VPS) that use detections in an overlapping receiver network to calculate geographic positions of tagged fish. I modelled the efficiency of an acoustic …

A Biodiversity Survey Of The Soil Crusts Of The Geographically Isolated San Nicholas Island, California, Usa And Description Of Species In Three Genera (Atlanticothix, Pycnacronema, Konicacronema) Previously Restricted To Brazil Using A Polyphasic Approach To Cyanobacterial Taxonomy, Brian Jusko

Masters Theses

San Nicholas Island, California, USA is a geographically-isolated island that experiences a semiarid climate and exhibits significant topographic and geologic diversity. Access to the island is restricted to the public and, as a result, only one previous study has been done on the algal biodiversity of its biological soil crusts. The previous study used morphology as the sole basis of species identification, and it was the aim of this study to corroborate and expand upon the results by including molecular data. Using 16S rRNA and 16S–23S ITS sequences and phylogenetic analyses, a diverse set of taxa were identified and are …

“Albertania” And “Egbenema”, Expanding Biodiversity In The Oculatellaceae (Cyanobacteria)., Mildred Akagha

Masters Theses

To conduct molecular studies of cyanobacteria of Lagos, Nigeria, a total of eight soil/subaerial samples were collected in Lagos State, Nigeria, and used to isolate cyanobacterial cultures that were characterized microscopically, sequenced, and phylogenetically analyzed. Within the resulting set of cultures, a number of Synechococcales were observed, particularly belonging to Oculatellaceae. “Egbenema” and two new putative species of the recently described genus Albertania were found. Both genera belong to a supported clade within the Oculatellaceae that includes Trichotorquatus and Komarkovaea. The two new putative species of Albertania, “A. egbensis” and “A. latericola”, were from the same sample, but phylogenetically were …

Effects Of Prescribed Fire On Planted Oak Growth And Survival In Restored Savannas, Allison Earl

Masters Theses

Most oak savannas in the Midwestern United States have been lost to agriculture and habitat degradation. Because of their rarity and ability to support high plant and animal diversity, savannas are often a target for restoration. Oak savanna restoration frequently relies on direct planting of oak seedlings to establish the necessary tree canopy. Returning fire to the system is critical to the herbaceous component of the savanna, but managers risk damaging or killing trees if burning is introduced too soon. I studied growth and physiological responses of three oak species (Quercus alba, Q. macrocarpa, and Q. velutina …

Soil Metabolite Succession In Vertebrate Decomposition Impacted Soils, Jennifer Kate Baer

Masters Theses

Vertebrate decomposition results in a pulse of critical nutrients such as nitrogen, carbon, and phosphorus into the environment creating a ‘hotspot’ immediately surrounding the carcass. While many decomposition studies have investigated vertebrate decomposition focused on the carcass itself, fewer studies have focused on the impacts of decomposition products on soils. Gaining a greater understanding of soil processes during decomposition could not only aid in better understanding soil biological activities but could also lead to new insights in nutrient cycling in the environment. The assemblage of soil metabolites, also known as the soil metabolome, exposes not only the breakdown products of …

Darkness Matters: Understanding The Ecological Effects And Human Sensory Perception Of Night Lighting, Zitong (Shirley) Hui

Masters Theses

Night is 50% of the planetary experience. Nighttime visible illumination is strongly tied to progress, human activities and urban structure. As our cities become brighter, they bring huge impacts on ecology and human perception.

Darkness is still something worth pursuing in urban nightscapes. This thesis explores the potential of using darkness as the starting point for designing public spaces for use at night, and focuses on the restoration of the ideal habitat for fireflies in the Jamaica bay area, in New York City. The study of the dynamic relationship between light, culture and wildlife can produce a flexible strategy that …

“Albertania” And “Egbenema”, Panding Biodiversity In The Oculatellaceae (Cyanobacteria)., Mildred Akagha

Masters Theses

To conduct molecular studies of cyanobacteria of Lagos, Nigeria, a total of eight soil/subaerial samples were collected in Lagos State, Nigeria, and used to isolate cyanobacterial cultures that were characterized microscopically, sequenced, and phylogenetically analyzed. Within the resulting set of cultures, a number of Synechococcales were observed, particularly belonging to Oculatellaceae. “Egbenema” and two new putative species of the recently described genus Albertania were found. Both genera belong to a supported clade within the Oculatellaceae that includes Trichotorquatus and Komarkovaea. The two new putative species of Albertania, “A. egbensis” and “A. latericola”, were from …

Lidar Evaluation Of The Structural Complexity Of Multi-Cropped White Oak (Quercus Alba) And Pine (Pinus Spp.) Plantings In East Tennessee, Usa, Bret Alan Elgersma

Masters Theses

Structural complexity has an important influence on wildlife habitat and several other ecosystem services. Establishment of white oak (Quercus alba) intercropped with loblolly pine (Pinus taeda), shortleaf pine (Pinus echinata), or eastern white pine (Pinus strobus), in 2014 provided the opportunity to investigate effects of planting species mixtures in different spatial arrangements on structural complexity. Terrestrial LiDAR was used to evaluate the structure of each intercropped treatment and monoculture control. The measures of complexity included: 1) rumple 2) top rugosity 3) standard deviation of individual tree crown area, 4) standard deviation of …

Examining The Co-Infection Effects Of Helminths And Malaria In An Indonesian Community, Andrea Rodríguez-Sánchez

Masters Theses

Malaria is one of the most prevalent vector-borne infectious diseases with major morbidity and mortality in sub-Saharan Africa and Southeast Asia. Recent epidemiological studies have shown that co-occurrence of soil-transmitted helminth (STH) infections, or infection caused by parasitic worms, are associated with increased risk of malaria infection. However, studies of the association between STH and malaria, and the effect of antihelminth (deworming) treatments that are more commonly used in areas with high STH infection rates, are sparse. Therefore, we explored the relationship between STH and malaria infection in an Indonesian community (N=1997) with high prevalence of both STH and malaria …

Fecal Findings: Investigating Eastern Massasauga Rattlesnake Diet Using Dna Metabarcoding, Alyssa Swinehart

Masters Theses

Characterizing the diet of imperiled species using minimally invasive methods is crucial to understanding their conservation requirements. DNA metabarcoding methods have been used to characterize the diet primarily in mammalian systems, while reptiles are heavily underrepresented in this literature. Here, we apply a DNA metabarcoding approach to study the diet of the eastern massasauga rattlesnake (Sistrurus catenatus); a Federally Threatened snake found throughout the Great Lakes Region. Eighty-three fecal samples collected across 10 different massasauga populations located in Michigan were sequenced. We use universal metazoan primers and develop a host-specific oligonucleotide blocker to uncover the full potential diet …

Trait Variation And Long-Term Population Dynamics Of The Invasive Alliaria Petiolata (Garlic Mustard) Across Three Microhabitats In Its Invaded Range, Laura Hancock

Masters Theses

Long-term population dynamics across heterogeneous environments can be a major factor in determining species’ ability to expand their ranges and persist in novel environments. Whether and how the relative performance of populations in different microsites over time impacts invasion into new microsites is poorly understood. Though largely restricted to disturbed semi-shaded microhabitats in its home range, the invasive herb Alliaria petiolata (garlic mustard) successfully invades intact forest understories – a novel microhabitat – in its introduced range, where it is known to impact above and below ground community composition. To test the hypothesis that source-sink metapopulation dynamics may be promoting …

Does Invasion Science Encompass The Invaded Range? A Comparison Of The Geographies Of Invasion Science Versus Management In The U.S., Lara Munro

Masters Theses

Biases in invasion science lead to a taxonomic focus on plants, particularly a subset of well-studied plants, and a geographic focus on invasions in Europe and North America. Geographic biases could also cause some branches of invasion science to focus on a subset of environmental conditions in the invaded range, potentially leading to an incomplete understanding of the ecology and management of plant invasions. While broader, country-level geographic biases are well known, it is unclear whether these biases extend to a finer scale and thus affect research within the invaded range. This study assessed whether research sites for ten well-studied …

Hormonal Responses To Seasonal Thermal And Ecological Stressors In Japanese Macaques (Macaca Fuscata), Lilianne Nelson

Masters Theses

Relative to most primate species, Japanese macaques (Macaca fuscata) experience extreme seasonal variation in thermal and ecological stressors that can impact energetic demands. To cope with these environmental changes, levels of metabolic hormones, such as cortisol and triiodothyronine, fluctuate to facilitate energetic adjustments. While previous research in primates has investigated thermal and ecological stressors individually, a combined assessment of these stressors alongside hormone levels can provide a more holistic understanding of the relationship between a primate’s thermoregulation, energetic balance, and stress. The goals of this study were to determine the effects of season, temperature and ecological stress on …

Improving Conservation And Recreation In Environments Shared By Humans And Bats, Hannah Shapiro

Masters Theses

White-nose syndrome (WNS) has drastically changed how caves are managed in the United States. This disease has killed millions of bats throughout eastern North America and continues to spread westward. Since the discovery of WNS, The U.S. National Park Service (NPS) has acted to slow the spread of the disease through the development of educational programs and the deployment of decontamination measures. Despite the vast array of research on the biological and ecological aspects of bats and WNS, few studies focus on how visitor attitudes and knowledge of management strategies implemented in response to WNS impact the effectiveness of these …

Variation In Tundra Plant Traits Across A Latitudinal Gradient, Katlyn Rose Betway

Masters Theses

High latitude regions are warming faster than most regions. Studies documenting change in plant cover due to warming have reported that graminoids, deciduous shrubs, and evergreen shrubs are increasing in some regions of the Arctic, but not at others. Mixed responses to warming have caused researchers to shift towards an emphasis on functional traits of individual species rather than their growth forms. This thesis focuses on ten measured plant functional traits for twelve arctic species at three regions spanning a latitudinal gradient in northern Alaska (Utqiaġvik, Atqasuk, and Toolik Lake). We compare mean trait values across the three regions for …

Impact Of Insecticide On Pollinator Communities In A Forested System: A Model System Using Eastern Hemlock, Tsuga Canadensis, Rosebay Rhododendron, Rhododendron Maximum, And Imidacloprid, David Bechtel

Masters Theses

Mortality of eastern hemlock, Tsuga canadensis (L.) Carrière (Pinales: Pinaceae), has occurred at a high rate since the arrival of the invasive hemlock wooly adelgid (HWA), Adelges tsugae Annand (Hemiptera: Adelgidae). The systemic neonicotinoid pesticide imidacloprid is soil-applied to hemlocks for effective control of HWA. However, is this pesticide translocated by incidental non-target plants under hemlock trees and, if so, does it impact non-target insects, such as pollinators? One commonly encountered flowering understory associate is Rhododendron maximum L. (Ericales: Ericaceae). Research has demonstrated that imidacloprid is translocated to leaves, nectar and pollen of R. maximum. The goal of this research …

Is Context Dependency Imperative To Understanding The Impacts Of Invasive Plants?, Brendan B. Haile

Masters Theses

Introduced exotic species have a tendency to become invasive and impact local biological communities. Invasions often impact community attributes such as cover and species richness, but these factors may also regulate patterns of invasion. In such cases, impacts may be dependent on the invasion context. We used data from the Buell-Small Succession Study, a long-term permanent plot study in the piedmont region of New Jersey, to document context dependency in invasion. To do this, we analyzed the factors that affected the colonization and growth of four invasive species, Alliaria petiolata, Lonicera japonica, Microstegium vimineum and Rosa multiflora, as well …

Identification And Analysis Of Genes With Differential And Tissue-Specific Expression In Poplars, Bailey Mitchell

Masters Theses

Poplars have become one of the most frequently studied plant species for their applications in biotechnology, commercial benefits, and ecological importance. Microarray analysis is commonly used to analyze differential gene expression in many organisms. Investigations have examined differential gene expression and performed functional analyses on a single tissue or organ within poplar trees or a closely related set of tissues and organs, but usually do not broadly analyze gene expression across a large number of tissues and organs in poplar. This thesis work aims to generate data on the most differentially expressed genes for the major groups of tissues and …

An Evaluation Of Unmanned Aerial Systems And Structure-From-Motion For Fluvial Large Wood Sensing And Risk Assessment, Daniel Gerke

Masters Theses

This research aims to show Unmanned Aerial System (UAS) and Structure-from-Motion (SfM) technology can, in combination, improve on traditional large wood (LW) monitoring techniques. More temporally and economically efficient data collected at a finer spatial resolution and greater spatial extent will increase the effectiveness of management plans and risk assessment for LW by providing decision-makers with a complete picture of the river.

Contemporary practices are too inefficient in time and labor for large-scale monitoring of fluvial LW with anything more than the most general management or risk assessment in mind. The paradigm of river research, the river continuum concept (RCC), …

Exploring Neighborhood Level Variation In Incidence And Secondary Transmission Of Seasonal Influenza, Melissa Freeland

Masters Theses

Influenza epidemics in the United States, are major causes of morbidity and mortality, and cause serious economic disruption on an annual basis. Evidence has begun to accumulate linking neighborhood-level socioeconomic disadvantage to higher rates of hospitalization and mortality related to influenza (Cordoba & Aiello, 2016; Jung, Lin, & Viswanath, 2013). Some studies suggest that this may be due to lower rates of vaccination, higher rates of comorbidities in socioeconomically disadvantaged communities (Cordoba & Aiello, 2016; Jung, Lin, & Viswanath, 2013; Ross & Mirowsky, 2001). However, few studies have evaluated the effects of neighborhood level socioeconomic disadvantage and structural features on …

Hurricanes And The Sounds Of Change: Puerto Rican Environment, Reggaeton, And Boricuaness, Isaiah Edwin Green

Masters Theses

In the summer of 2017, reggaeton took the world by storm, topping popular music charts globally with the song “Despacito” by Luis Fonsi and Daddy Yankee, and leading to a short-lived surge in Puerto Rican tourism. The term boricua holds strong connections to reggaeton and generally expresses a call to indigenous and Spanish heritage. While music videos and the general popularization of reggaeton created an image of Puerto Rico as a desired destination, the conditions of the island’s environment swiftly changed due to the destructive effects of hurricanes Irma and Maria in August and September of 2017. In light of …

The Effects Of Deforestation On Carbon Storage In Khabarovsk Krai, Russia, Rowan E. Cole

Masters Theses

With over one-fifth of the planet’s forested area, Russia has become a major source of round wood and wood products. In 2003, the Russian government established an energy policy aimed at reducing the negative impacts of industry on the environment and improving the nation’s environments as a whole. This study analyzes deforestation and logging activities in the forests along the Amur River in Khabarovsk Krai in the Russian Far East to determine the effectiveness of Russian government policy in achieving the goals put forward in the 2003 energy policy. Changes in land-use and land-cover will be assessed using 500-meter resolution …

Impacts Of Plant-Microbe Interactions On Seedling Performance In A Riparian Forest Invaded By Lonicera Maackii, Taylor E. K. Strehl

Masters Theses

Soil microbes have profound impacts on plant growth and survival and can either promote or inhibit plant dominance. Exotic plants are often strongly invasive because they have escaped their natural enemies, potentially including antagonistic soil microbes. I examined how the invasive shrub Lonicera maackii and a common native tree, Acer negundo, responded to soil microbial communities to determine the role of soil microbes in regulating invasion success. This was done by growing both species with microbes from invaded (L. maackii) and uninvaded (A. negundo) soils collected from three locations within a riparian forest. Seedlings were …

Identifying Priority Conservation Areas And Strategies For Myotis Sodalis (Chiroptera: Vespertilionidae) Via Habitat And Connectivity Modeling, Ashleigh B. Cable

Masters Theses

Myotis sodalis, the Indiana bat, is a federally endangered bat species in the United States of America (USA). Conservation efforts are typically focused at identified maternity sites at local scales, however, the species is a regional migrant that interacts with its environment at multiple spatial scales. We are limited in our knowledge of landscape-level requirements of this species, especially in large areas such as Illinois, USA, where a wide range of environmental and landscape conditions exist. Many previous M. sodalis habitat studies have limited their focus to smaller spatial scales. Due to limitations in funding, personnel, and time, it …

Food Security In The United States: A Futures Analysis Via Systems Modeling, Jennifer Lynn Trumbo

Masters Theses

Food insecurity is a pressing issue not only in developing countries, but in communities across the United States (US). Food insecurity is the lack of nutritious, sufficient, accessible, and reliable culturally-appropriate food. At least 42.2 million people across the US face food insecurity. Food insecurity has been associated with institutional barriers, gender, indigeneity, citizenship, human immunodeficiency virus (HIV) status, racialization, and poverty. Further, a lack of sufficient, nutritious food is associated with serious health outcomes. Food insecure populations have higher rates of chronic disease, mental health issues, and obesity. Considering the negative health outcomes associated with food insecurity, and its …

Rose Eriophyid Mites: An Ecological Study Of Phyllocoptes Fructiphilus Keifer (Acari: Eriophyidea), Vector Of Rose Rosette Virus, And Its Relationship With Rosa Species, Katherine Marie Solo

Masters Theses

Rose rosette disease (RRD) is an epidemic that is lethal to roses. The causal agent for this disease is thought to be rose rosette virus (RRV) which is vectored by an eriophyid mite, Phyllocoptes fructiphilus. Our research was aimed at answering fundamental ecological aspects of the relationship this mite shares with its rose hosts. In Chapter I, Rosa species were evaluated for levels of residential populations of P. fructiphilus. Statistical differences for year and rose species (α = 0.05) were observed. However, the resolution of the statistical tests was low due to loss of replications from destructive sampling …