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Graduate Theses, Dissertations, and Problem Reports

Aquatic sciences

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Effects Of Culverts On Brook Trout Genetic Diversity, Darren M. Wood May 2014

Effects Of Culverts On Brook Trout Genetic Diversity, Darren M. Wood

Graduate Theses, Dissertations, and Problem Reports

Brook trout (Salvelinus fontinalis) are a species of concern within their native range due to a historical loss of habitat, overfishing, and stocking of non-native salmonids. Road culverts have been recognized as an additional impediment to population persistence as movement between diverse habitat types has been identified as an alternative life-history strategy to maximize spawning and growth. Brook trout were genetically analyzed using a suite of 13 microsatellite loci above 7 culverts with varying levels of passability classified through a physical protocol. While most sites were not found to have losses in genetic diversity, populations above culverts with a high …


Exploration Of Stream Habitat Spatial Modeling; Using Geographically Weighted Regression, Ordinary Least Squares Regression, And Natural Neighbor Interpolation To Model Depth, Flow, And Benthic Substrate In Streams, Kenneth R. Sheehan Dec 2011

Exploration Of Stream Habitat Spatial Modeling; Using Geographically Weighted Regression, Ordinary Least Squares Regression, And Natural Neighbor Interpolation To Model Depth, Flow, And Benthic Substrate In Streams, Kenneth R. Sheehan

Graduate Theses, Dissertations, and Problem Reports

Assessment and modeling of stream habitat are integral to understanding streams and the biota within them. In the past several decades, assessment sophistication of ecologic systems increased due to analysis power afforded by gains in computing capability. Spatial data analysis methodology grew alongside computing power and incorporated spatial qualities of ecological data, thereby providing new insights. New methods like geographically weighted regression (GWR) and more established methods like interpolation are now being used in ecological studies to guide assessments and management decisions. However, their accuracy and utility for analysis of stream habitat data have not been fully explored. To clarify …


Mining And Residential Development Interact To Produce Highly Impaired Stream Conditions In An Intensively Mined Appalachian Watershed, Eric Richard Merriam Dec 2009

Mining And Residential Development Interact To Produce Highly Impaired Stream Conditions In An Intensively Mined Appalachian Watershed, Eric Richard Merriam

Graduate Theses, Dissertations, and Problem Reports

Large scale surface mining in southern West Virginia causes significant alteration of headwater stream networks. It is unclear, however, the extent to which mining interacts with other stressors to determine physical, chemical, and biological conditions in aquatic systems downstream. Through a watershed scale assessment of Pigeon Creek, the specific objectives of this study were to: (1) quantify the direct and interactive effects of mining and residential development on in-stream conditions; and (2) identify landscape thresholds above which biological impairment occurs. Our results indicate high levels of impairment to habitat, water quality, and benthic invertebrate communities within this watershed. Statistical analyses …


Habitat Selection And Predation Risk In Larval Lampreys, Dustin M. Smith Aug 2009

Habitat Selection And Predation Risk In Larval Lampreys, Dustin M. Smith

Graduate Theses, Dissertations, and Problem Reports

This thesis examines habitat preference and the influence of habitat on predation of larvae (ammocoetes) of the least brook lamprey (Lampetra aepyptera). The thesis comprises three chapters: (1) an introduction and literature review on the general life history of lampreys and on studies related to ammocoetes and their habitat, (2) an experimental study of habitat preference in ammocoetes of the least brook lamprey, and (3) an experimental study of the relationship between habitat availability and predation risk in ammocoetes. For the first study, we quantified substrate selection in small (< 50 mm) and large (100-150 mm) ammocoetes of the least brook lamprey. In aquaria, ammocoetes were given a choice to burrow into six equally-available substrate types: small gravel (2.36-4.75 mm), coarse sand (0.5-1.4 mm), fine sand (0.125-0.5 mm), organic debris (approximately 70% decomposing leaves and stems, 15% silt, and 15% sand), an even mixture of silt, clay, and fine sand, and silt/clay (< 0.063 mm). Fine sand was selected with a significantly higher probability than any other substrate. In the second study, we experimentally examined the influence of habitat availability on predation risk of ammocoetes. Ammocoetes were placed in aquaria containing a predator species (yellow bullhead, Ameiurus natalis) and one of 3 substrates: fine sand (0.125-0.5 mm), coarse sand (0.5-1.4 mm), or silt/clay (<0.063 mm). Use of the three substrate types was based on a previous experiment where fine sand was determined to be the preferred benthic habitat of least brook lamprey. Based on 10 trials with each habitat type, survival of ammocoetes was highest in aquaria with fine sand (mean = 80%), and lower in those with coarse sand (mean = 58%) and silt/clay (mean = 4%). The results of both studies conducted indicate that populations of least brook lamprey ammocoetes may be limited by the availability of fine sand habitat. The first study indicated that least brook lamprey ammocoetes are habitat specialists, preferring substrates composed primarily of fine sand. The second study showed that the availability of fine sand habitat may influence the predation risk of ammocoetes, as ammocoete survival from predation was highest in fine sand, and lower in other substrates.


Predictive Modeling Of Freshwater Mussels (Unionidae) In The Appalachians, Alison R. Mynsberge Aug 2008

Predictive Modeling Of Freshwater Mussels (Unionidae) In The Appalachians, Alison R. Mynsberge

Graduate Theses, Dissertations, and Problem Reports

Freshwater mussels are in decline, particularly in the Appalachian region of North America. This region contains the world's greatest diversity of freshwater mussels, but many species are now threatened or endangered. Little is known of the basic ecology and distributions of species of freshwater mussels relative to other freshwater organisms. The goal of this study was to use predictive modeling to predict distributions of freshwater mussels in the Appalachians and identify correlated factors using a watershed framework. Models were developed in the upper Mid-Atlantic and Ohio drainage regions using subwatersheds and separately in the Tennessee region using catchments. Models developed …


Statewide Analysis Of Brook Trout (Salvelinus Fontinalis ) Population Status And Reach-Scale Conservation Priorities In West Virginia Watersheds, Jason W. Clingerman Aug 2008

Statewide Analysis Of Brook Trout (Salvelinus Fontinalis ) Population Status And Reach-Scale Conservation Priorities In West Virginia Watersheds, Jason W. Clingerman

Graduate Theses, Dissertations, and Problem Reports

The Eastern Brook Trout Joint Venture (EBTJV) was formed to implement range-wide strategies that sustain healthy, fishable brook trout populations. Hudy et al. (2006) recently completed a comprehensive analysis of eastern brook trout distributions representing a critical first step towards fully integrating brook trout conservation efforts in this region. This study was designed to supplement and complement existing data on brook trout distributions and status within West Virginia. We examined recently obtained data for the entire state to update the EBTJV distributional map published in Hudy et al. (2006). We then used fish sample data along with GIS-acquired landscape data …


An Interpolation Method For Stream Habitat Assessments With Reference To The Crystal Darter, Kenneth Richard Sheehan Dec 2006

An Interpolation Method For Stream Habitat Assessments With Reference To The Crystal Darter, Kenneth Richard Sheehan

Graduate Theses, Dissertations, and Problem Reports

Crystallaria asprella spp. (Elk River crystal darter) is documented only in Elk River, West Virginia. Little life history detail is known about this lotic, benthic-dependent species. Previous studies have led to a very basic understanding of the use of depth, flow and substrate of the crystal darter (Crystallaria asprella), and less is known about the Elk River crystal darter. Due to substrate-specificity in crystal darters (which reportedly bury in sand), a study concerning benthic stream habitat modeling was undertaken. Substrate and depth modeling using >5% of an area sampled at a resolution of 0.093 m2 square spatial data in a …