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Identification And Characterization Of Isoflavone Reductase Family Members In Soybean, Negin Azizkhani

Electronic Thesis and Dissertation Repository

Soybean’s yield is threatened by Phytophthora sojae, a pathogen responsible for stem and root rot disease. Glyceollins, unique antimicrobial agents specific to soybeans in partially preventing P. sojae infection, are derived from the isoflavonoid branch of the general phenylpropanoid pathway. One pivotal enzyme exclusively involved in glyceollin synthesis in soybean is the isoflavone reductase (GmIFR), which catalyzes the 2'-hydroxydaidzein conversion to 2'-hydroxy-2,3-dihydrodaidzein as a precursor for glyceollin biosynthesis. To comprehensively identify all members of the GmIFR gene family within the soybean genome, keyword and blast protein searches were conducted, identifying 98 putative GmIFRs. Among these candidates, …

Evaluation Of Cultivar Susceptibility And In-Furrow Fungicide Efficacy For Management Of Southern Blight Of Soybean, Adam Joseph Connor

Theses and Dissertations

Southern Blight (SB), caused by the fungus Athelia rolfsii, has increasingly impacted Mississippi soybean production with estimated economic losses in recent years rising from $181,616 in 2016 to $9,508,412 in 2021. Currently, there are no recommended fungicides and no known commercially available cultivar resistance. Eleven cultivars were evaluated for their response to the presence of Athelia rolfsii in the 2021 field trial. An in vitro fungicide assay was conducted to evaluate the efficacy of five fungicides to determine the respective EC50. These fungicides were then evaluated in combination with three cultivars, one mild, one moderate, and one severe in the …

A Robust Agroinfiltration Method, Bryce N. Trull

Masters Theses

Stable transformation of soybean (Glycine max) is a markedly slow and laborious process. Thus, a tool that enables rapid evaluation of genetic elements in planta is critical to advance complex research and genetic engineering in soybean. To that end, a substantially robust agroinfiltration method was innovated in this work. Agroinfiltration is a technique that leverages Agrobacterium-mediated transient transformation to deliver genetic elements to the cells of whole plant tissues, usually leaves. Several factors were found to be relevant to successful soybean leaf agroinfiltration, including genotype, surfactant, developmental stage, and Agrobacterium culture medium. The research represents not only …

Evaluation Of Weed Control Efficacy And Crop Tolerance To Florpyrauxifen-Benzyl Coated Onto Urea, Bodie Lyn Cotter

Graduate Theses and Dissertations

Frequent off-target movement occurrences to soybean [Glycine max (L.) Merr.], rice (Oryza sativa L.) injury, and a lack of barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.] control followed the commercial launch of florpyrauxifen-benzyl in 2018. Florpyrauxifen-benzyl is a synthetic auxin, Herbicide Resistance Action Committee (HRAC)/Weed Science Society of America (WSSA) Group 4 herbicide used for postemergence weed control in rice and labeled for application at 30 g ae ha-1. Previous research documented that soybean was susceptible to injury following spray applications of florpyrauxifen-benzyl at less-than-labeled rates, and certain varieties of rice are less tolerant to spray-applied florpyrauxifen-benzyl at 30 g ae …

Impact Of Fermented And Non-Fermented Plant-Based Foods Supplementation On Gut Microbiota And Metabolites In C57bl/6j Mice, Priya Darshan Gandhi

Masters Theses

Plant-based proteins have gained popularity because of their high nutritional value and more sustainable alternative to animal-based proteins. Soybean and chickpea are two widely consumed plant-based proteins, whereas tempeh is a popular plant-based fermented whole food product that is rich in protein. With the increase in the development of plant-based food products, there is little research into how plant proteins affect gut microbiota characteristics and metabolites. Therefore, there is a need to understand the underlying mechanisms surrounding the consumption of these foods. The purpose of this study was to investigate the health benefits of soybean, chickpea, and their tempeh counterparts’ …

Survey And Prevalence Of Palmer Amaranth Herbicide Resistance In South Carolina, Mitchell Williams

All Theses

Palmer amaranth is a troublesome weed for growers to control, not only due to its aggressive growth characteristics that limit row-crop production, but because of its resistance to different herbicide modes of action. The first case of herbicide resistance in Palmer amaranth was detected in 1989 and has since grown to nine different herbicide classes throughout the United States. New herbicide modes of action have not been developed since the 1980s, so proper stewardship of the remaining modes of action is important for effective control of Palmer amaranth. Increased herbicide resistance from states bordering South Carolina have been reported; therefore, …

Marginal Agricultural Land Identification In The Lower Mississippi Alluvial Valley, Prakash Tiwari

Theses and Dissertations

This study identified marginal agricultural lands in the Lower Mississippi Alluvial Valley using crop yield predicting models. The Random Forest Regression (RFR) and Multiple Linear Regression (MLR) models were trained and validated using county-level crop yield data, climate data, soil properties, and Normalized Difference Vegetation Index (NDVI). The RFR model outperformed MLR model in estimating soybean and corn yields, with an index of agreement (d) of 0.98 and 0.96, Nash-Sutcliffe model efficiency (NSE) of 0.88 and 0.93, and root mean square error (RMSE) of 9.34% and 5.84%, respectively. Marginal agricultural lands were estimated to 26,366 hectares using cost and sales …

Activity Level Of Helicoverpa Armigera Nucleopolyhedrovirus (Hearnpv) And Feeding Habits Of Helicoverpa Zea Larvae After Ingestion Of Hearnpv In Mississippi Soybean, Judge Tyler Fortenberry

Theses and Dissertations

HearNPV was applied to a soybean field and evaluated for residual efficacy at different time intervals (0, 12, 24, 36, 48, and 72 hours) after application in laboratory bioassays with treated leaves. Larval mortality was rated at five, seven and twelve days after larval infestation. Larval mortality increased as the number of days after infestation increased. To evaluate the feeding habits of Helicoverpa zea at the 2^nd and 3^rd instar, HearNPV exposed larvae and untreated larvae were weighed at zero (before diet exposure), four, and seven days. At four days after exposure, larval weight gain of …

Planting Date, Seed Size, And Maturity Effects On Cotton And Soybean Growth And Yield In South Carolina, Sarah Holladay

All Dissertations

Seed size, seeding rates, pre-emergence (PRE) herbicides, planting dates, and maturity groups are all important factors that growers must consider before planting cotton or soybean. Previous research has suggested that seed size and seedling vigor are positively correlated and having greater seeding vigor may compensate for adverse planting conditions, pest and disease pressure, and potentially injury from PRE herbicides. Seeding rates and planting dates for cotton are dependent on the variety, environmental conditions, and grower goals. Planting date and maturity group selection are also important considerations for soybean growers in SC as in many cases soybean is planted in rotation …

Precision Management Of Inputs In Cotton And Soybean Production In South Carolina, Kyle Smith

All Theses

The adoption of precision agriculture technologies and developing specific product use recommendations in cotton and soybean production could help farmers reduce input costs and optimize overall farm profitability. The objectives of this research were to evaluate whether or not the use of variable rate seeding in cotton could increase profitability and to determine the rainfast interval of commonly used insecticides in cotton and soybean production. The first trial, variable rate seeding in cotton, was implemented at the Edisto Research and Education Center near Blackville, SC across five years to evaluate variable rate seeding in cotton. Results from trials in South …

Effect Od Different Sources And Application Rates Of Sulfur On Corn And Soybean Production Systems In Louisiana, Diego Mayorga Valladares

LSU Master's Theses

Sulfur (S) is a structural component of amino acids such as cysteine and methionine and is involved in important functions within the plant like photosynthesis, carbon and nitrogen metabolism, protein synthesis of oils, and detoxification mechanisms. Sulfur deficiency in crops has intensified around the world. Some of the reasons are improvement in controlling SO₂ emissions from industries, growing usage of high analysis S-free fertilizers and augmented cropping intensity. Sulfur fertilization has become an important factor in crop production systems and fertilization guidelines for S need to be up-to-date to improve use efficiency and compensate for rising prices of fertilizers. …

Metagenomic Analysis Of Root-Associated Microbiome Of Healthy And Taproot Decline-Affected Soybeans And Identification Of Healthy Soybean Root Endophytes With Protective Activity Against The Causal Agent, Xylaria Necrophora, Uyen Wesser

Theses and Dissertations

Plant roots are associated with a diverse microbial community of bacteria and fungi. The root microbiome communities associate with the root surface or penetrate the superficial layers of root tissues. It is of high agronomic interest to characterize root microbiomes and identify microbes with beneficial effects on plant defense against pathogens. Soybean taproot decline (TRD) is an emerging soil-borne disease caused by a fungus classified as Xylaria necrophora, challenging to control and with devastating effects on yield. Our group has initiated a study of the soybean root microbiome with three primary experiments: (I) perform a comparative study of root …

Assessing Wood Failure In Plywood By Deep Learning/Semantic Segmentation, Ramon Ferreira Oliveira

Theses and Dissertations

The current method for estimating wood failure is highly subjective. Various techniques have been proposed to improve the current protocol, but none have succeeded. This research aims to use deep learning/semantic segmentation using SegNet architecture to estimate wood failure in four types of three-ply plywood from mechanical shear strength specimens. We trained and tested our approach on custom and commercial plywood with bio-based and phenol-formaldehyde adhesives. Shear specimens were prepared and tested. Photographs of 255 shear bonded areas were taken. Forty photographs were used to solicit visual estimates from five human evaluators, and the remaining photographs were used to train …

Characterization And Management Of Auxin-Resistant Palmer Amaranth In Tennessee, Delaney C. Foster

Doctoral Dissertations

Palmer amaranth has a long history of evolving resistance to herbicides to the point it has become a significant row crop production obstacle. Cotton and soybean growers were offered new technologies in 2016, expanding in-crop herbicide options to include dicamba or 2,4-D. Within three years of commercialization, dicamba use in these crops increased ten-fold and growers began to report Palmer amaranth escapes in west Tennessee auxin-tolerant production systems. A survey of Palmer amaranth escapes in dicamba and 2,4-D-tolerant cotton and soybean fields in Tennessee was conducted in the fall of 2021 with the objective of determining if poor control was …

Functional Analysis Of Soybean Proteinase Inhibitor Genes And Cyst Nematode-Inducible Synthetic Promoters For Insects And Nematode-Resistance In Plants, Mst Shamira Sultana

Doctoral Dissertations

Proteinase inhibitors (PIs) from legumes have the potential for use as protectants in response to pests and pathogens. Soybean (Glycine max) contains two trypsin inhibitors (TIs): Kunitz trypsin inhibitor (KTI) and Bowman-Birk inhibitor (BBI). In this study, the possible role of soybean TIs in plant defense against insects and nematodes was investigated. In addition to the three known TIs (KTI1, KTI2 and KTI3), novel inhibitors KTI5, KTI7, and BBI5 were identified in soybean. Their functional role was further examined by overexpression in soybean and Arabidopsis. In vitro enzyme inhibitory assays showed significant increase in trypsin and chymotrypsin inhibitory …

Additional Sulfur Does Not Alleviate Cadmium Toxicity In Soybean, Spencer Matt

Electronic Thesis and Dissertation Repository

Cadmium (Cd) is non-essential and toxic. Sulfur (S) addition to contaminated soils reduces Cd toxicity in rice and corn. I aimed to determine the underlying mechanisms by which S reduces Cd toxicity in hydroponically- and soil-grown soybean. In the presence of Cd, plant biomass was reduced by ~20%, Cd accumulated up to 45 μg/g in roots and 15 μg/g shoots, and concentrations of Cd chelators increased by more than 10-fold. Addition of S to Cd- treated plants had no effect on plant biomass, concentrations of Cd in roots and shoots, or vacuolar Cd sequestration in the root cortex. While additional …

Determining Residual Control And Systemic Activity Of Commonly Used Insecticides In Soybean And Cotton, Jacob H. Smith

Theses and Dissertations

Chemical control is a critical component of integrated pest management in cotton and soybean production. Residual efficacy of foliar insecticides can be highly variable and difficult to quantify due to several factors. The purpose of this research was to determine residual control and concentrations in flowering structures of commonly used insecticides. This research focused on the concentrations of active ingredient within the plant as well as efficacy over time. Previous research suggested chlorantraniliprole had a long residual and was highly lethal on corn earworm up to 28 days after treatment (DAT) in soybean; however, the results found in cotton were …

Evaluating The Ecological Relationships Among Beauveria Bassiana, Kudzu Bug And Kudzu, Kassie L. Hollabaugh

Masters Theses

When kudzu bug, Megacopta cribraria, was identified in the United States in 2009 as an invasive species, populations began to establish, increase, and spread throughout the southeastern region at intense rates. Kudzu bug invades urban structures, causing unpleasant scenes for homeowners, and reduces crop yield, such as soybean. Kudzu bug caused about $2.8 million in soybean yield loss and treatment in Tennessee in 2020. Although initial spread was rapid throughout the southeastern U.S., spatial modeling has shown populations of kudzu bug are declining and reducing risk of crop damage to growers. These local and regional declines in populations appear …

Breeding Soybean [Glycine Max (L) Merr.] Under Reduced Irrigation, Francia Seconde Ravelombola

Graduate Theses and Dissertations

Soybean [Glycine max (L) Merr.], a legume species native to East Asia in the Fabaceae family, ranks among the most important food crops in the world. It is widely grown and known for its high protein and oil concentration. Soybean is valuable because its seeds have multiple applications in food, feed, pharmaceutical, and industrial enterprises. Even though seed yield is the most important trait, breeders have recently given a significant attention to quality traits, such as high protein or modified oil concentration. Soybean seed protein inheritance has been extensively studied; however, genetics of high-protein ‘BARC-7’ soybean are still unknown.On the …

Root Phenotyping Of Peptide-Treated Glycine Max, Salem Jackson

Biological Sciences Undergraduate Honors Theses

Plant elicitor peptides (Peps) – endogenous chains of amino acids involved in natural plant defense – have been shown to decrease damage from herbivores and pathogens by inducing an immune response, increasing the emission of volatile organic compounds (VOCS), transcripts, and metabolites. Exogenous treatment of soybean seeds with plant elicitor peptide GmPep3 has been shown to induce these broad-spectrum defenses and offers a new method for increasing crop yield. However, the effects of GmPep3 on indicators of soybean health – root characteristics, growth stages, etc. – have not been fully realized.

Using the root-phenotyping platform RhizoVision Explorer, several root traits …

Re-Evaluation Of Late Season Action Thresholds And The Effect Of Seed Treatments On Early Season Colonization Of Threecornered Alfalfa Hopper, Spissistilus Festinus (Say), In Louisiana Soybean, Glycine Max (L) Merr, Tyler Ray Tagle Musgrove

LSU Master's Theses

Soybean, Glycine max (L.) Merr, is considered the most economically important oil and feed crop in the US and is grown on nearly 35,000,000 ha on an annual basis. Factors that limit yield include weed pressure, disease infection, and of particular interest to entomologists, insect herbivory. Soybean is targeted by a range of above and below ground pests which are primarily controlled by insecticides. Neonicotinoids are a recently popularized insecticide class that when applied as a seed treatment, can provide protection from early season pests. The most economically significant early season pest is threecornered alfalfa hopper, Spissistilus festinus (Say), whose …

Impact Of New Technologies On Weed Control In Louisiana Rice Production, David C. Walker

LSU Doctoral Dissertations

Field studies were conducted in 2018-2021 at the LSU Agricultural Center’s H.R. Caffey Rice Research Station (RRS) near Crowley, LA, and the Dean Lee Research and Extension Center (DLREC) near Alexandria, LA to evaluate off-target florpyrauxifen movement on soybean. Soybean was treated with florpyrauxifen at the V4-V5 or R1-R2 growth stages. Soybean injury was evaluated at 1, 7, 14, and 28 days after treatment (DAT) and soybean plant height (cm) was recorded at 7, 14, and 28 DAT. At soybean maturity, yield and individual yield components were subjected to regression analysis to describe the relationship between florpyrauxifen rate and soybean …

Understanding The Cellular And Physiological Mechanisms Of Fertilization And Early-Stage Seed Development, Mohammad Foteh Ali

Theses and Dissertations--Plant and Soil Sciences

Flowering plants have evolved a unique double-fertilization process. Two sperm cells fuse with two female gametophytic cells, the egg and central cells within the ovule, giving rise to the embryo and endosperm, respectively. Sperm cells in flowering plants are nonmotile and delivered in close proximity to the egg and central cells by the pollen tube. Flowering plants have established filamentous actin (F-actin) based sperm nuclear migration system for successful fertilization. Prior to fertilization, the female gamete forms a mesh-like structure of F-actin that shows constant inward movement from the plasma membrane periphery to the center of the cell where the …

Design Of Affordable Polyaniline - Based Wearable Sensor For Real Time Plant Growth Monitoring, Temitope Borode

Electronic Theses and Dissertations

The need for precision agriculture in today and future farming cannot be overstressed. Recent agriculture is characterized by numerous challenges such as environmental stressors and resource constraints resulting in low crop yield and unsustainable agriculture practices. Understanding plant growth mechanism and growth rate under the external influence is a bedrock towards precision agriculture practices ensuring optimum yield and sustainable utilization of resources. The current study addresses this need by developing and applying an affordable and stable sensor for monitoring plant growth. The sensor was fabricated by in-situ chemical polymerization of aniline on an elastic band substrate by dip coating. The …

Positive Correlation Between A3 Subunit Of Glycinin And Firmness Of Tofu Made From Soybeans Grown In Three Locations Over Two Years, Ruiqi Chen

Theses and Dissertations

Producing desirable firmness is important in manufacturing tofu from soybeans. This study’s objective was to explore the environmental impact (location and year) on soybean chemical components and identify the correlations between chemical composition and the firmness of tofu made from soybeans planted in three locations over two years. Seventeen soybean Plant Introductions (PI) from the USDA Soybean Germplasm Collection and eight check varieties were planted in Mississippi, Virginia and Missouri in 2017 and 2018. Protein subunit composition, protein secondary structure, phytic acid content, Ca²⁺ and Mg²⁺ content were determined. The result showed that A₃ subunit content was …

Soybean (Glycine Max) Response To Multiple, Sublethal Exposures Of 2,4-D And Dicamba From Vegetative Through Reproductive Growth, Graham Robert Oakley

Theses and Dissertations

This study was conducted to determine whether soybean productivity is affected by multiple, sublethal herbicide exposures. The effects of dicamba and 2,4-D on soybean (Glycine max) productivity was investigated at 17 site-years. Relative to a single exposure of dicamba at R1, an additional exposure at either V3 or R3 reduced yield up to 23%. Three or more applications did not further decrease yields relative to an R1&R3 exposure. For 2,4-D, a single application to V3, R1, R3, or R5 soybean did not affect grain yield. However, two exposures of 2,4-D occurring from V3 through R3 reduced yield 5 to 7%. …

Digital Design And Thermomechanical Process Simulation For 3d Printing With Abs And Soyhull Fibers Reinforced Abs Composites., Saleh Khanjar

Electronic Theses and Dissertations

Recent demonstrations with fused filament fabrication (FFF) 3D printing have shown to produce prototypes as well as production components. Additionally, due to the FFF process platforms being low-cost and readily available there has been a high-demand to produce on-demand parts for various applications in automotive, in-space manufacturing and electronic industries. However, current limitations such as limited availability of advanced composites materials, and guidelines for design-for-manufacturing make the process prone to trial-and-error experiments both at the materials development, product design and manufacturing stage. In this work, new thermomechanical process simulations platform, Digimat-AM has been evaluated to address and demonstrate digital design …

Relative Soybean Response To Aminocyclopyrachlor, 2,4-D, Dicamba, And Aminopyralid, Trey I. Clark

Masters Theses

This research compared the visual symptomology of four auxin herbicides applied at three rates to simulate tank contamination on non-auxin tolerant soybeans. The herbicides examined were aminocyclopyrachlor (ACP), 2,4-D, dicamba, and aminopyralid. The standard labeled rates (SLR) used to base the application rates were 0.12 kg ae ha^-1 for ACP and aminopyralid while dicamba and 2,4-D used 1.12 kg ae ha^-1. These four herbicides exhibit similar symptoms on soybeans which is problematic when diagnosing soybean response. One goal of this project was to obtain high-quality images of the four herbicide’s effect on soybeans, with the hope of …

Influence Of Planting Date, Maturity Group, Harvest Aids And Fungicide Application On Soybean (Glycine Max (L.) Seed Quality, Ana Priscila Campos

LSU Master's Theses

Field studies evaluated the influence of planting date, maturity group, and harvest timing on soybean yield and seed quality at the LSU AgCenter Northeast (NERS), Macon Ridge, and Dean Lee Research Stations in 2018-2020. In addition, the influence of harvest aid and fungicide application on seed quality impact from delayed harvest and environment was investigated at NERS in 2019 and 2020 in both field and environmentally controlled growth chambers. Soybean yield was maximized when maturity group IV and V soybean varieties were planted between Mid-April and Mid-May. Earlier and later planting dates did not result in maximized yield. Planting date …

The Effects Of Silver Nanoparticles On Soybean (Glycine Max) Growth And Nodulation, Paul J. Boersma

Electronic Thesis and Dissertation Repository

Due to their antimicrobial properties, silver nanoparticles (AgNPs) have become more popular in consumer and industrial products, leading to increasing agricultural and environmental concentrations. Exposure to AgNPs could be detrimental to plants, microbes, and their symbiotic relationships. When subjected to 10 µg/mL AgNPs in a 96-well plate, growth of Bradyrhizobium japonicum USDA 110 was halted. In hydroponic culture with 2.5 µg/mL AgNPs, biomass of inoculated Glycine max (L.) Merr. was 50% of control. Axenic plants were unaffected by this dose, but growth was inhibited at higher doses, indicating that AgNPs inhibit both nodulation and growth. Nodules treated with 2.5 µg/mL …