Digital Commons Network^™

Reconstructing Geographic And Trophic Histories Of Fish Using Bulk And Compound-Specific Stable Isotopes From Eye Lenses, Amy A. Wallace

USF Tampa Graduate Theses and Dissertations

The present research examined the viability and utility of eye lenses as a source of lifetime stable-isotope records in fish. It is presented in three sections. The first section compared bulk isotopic variation (bulk analysis) within fish eye-lenses at two temporal resolutions and compared patterns obtained from left and right eyes. The first temporal resolution was lower in an attempt to expose broad-scale isotopic changes during life while reducing effort and cost. This approach did reveal lifetime patterns, but tended to miss certain life events, particularly during early life. The second resolution was higher and provided detail that was missed …

Use Of Spectrofluorometry To Detect Petroleum Hydrocarbons In The Marine Environment, Mary Iris Abercrombie

USF Tampa Graduate Theses and Dissertations

The genesis of this research was the Deepwater Horizon oil spill, which discharged petroleum and gas into the Gulf of Mexico for 87 days in 2010. High-resolution fluorescence spectroscopy was employed for the detection of petroleum in seawater samples following the oil spill. Fluorescence arises from the chemical structure of π-bonding in C=C bonds, especially those in aromatic structures. Spectrofluorometry was also used to observe and track the formation of petroleum plumes in seawater undergoing controlled physical dispersion in a wave tank, both with and without the addition of chemical dispersant. Further, the changing fluorescence characteristics of a broad range …

Untapped Potential Of Gorgonian Octocorals For Detecting Environmental Change In Biscayne National Park, Florida, Usa, Selena A. Kupfner Johnson

USF Tampa Graduate Theses and Dissertations

One consequence of dramatic stony-coral loss has been recognition that gorgonian octocorals (Anthozoa: Octocorallia) have emerged among the dominant reef fauna. However, gorgonians are notoriously difficult to field-identify and consequently have been underrepresented in most monitoring efforts resulting in a lack of long-term data. The rich diversity of habitats, close proximity to the urban center of Miami, and connectivity to other areas of Florida have made Biscayne National Park an active location for reef research since its establishment in 1968. As such, a plethora of data (e.g., museum specimen and species abundance data) has been collected and stored in archives …

Past Climate And Sea-Level Reconstruction Using Cave Deposits From Mallorca, Spain, Oana-Alexandra Dumitru

USF Tampa Graduate Theses and Dissertations

The potential impacts of the increasing temperature on the water resources, as well as the hazards associated with the sea-level rise in the low-elevation coastal zones of the Mediterranean Sea, makes this region vulnerable to current climate change due to global warming. Hence, accurate projections of the future hydroclimate scenarios in this area are crucial. Long-term information on climate and sea-level variability cannot be obtained by direct observations or using short instrumental records. However, various geological archives may provide valuable data that can be then used to assess the models used for future predictions.

This thesis presents results on past …

The Adaptations Of The Sulfur-Oxidizing, Gammaproteobacterium "Candidatus Endoriftia Persephone", Endosymbiont Of The Giant Tubeworm Riftia Pachyptila, To Hydrothermal Vent Habitat Heterogeneity, Juliana M. Leonard

USF Tampa Graduate Theses and Dissertations

The siboglinid tubeworm Riftia pachyptila is a dominant member of the deep-sea megafauna where seawater and hydrothermal vent (HTV) effluent interface and mix. It is one of the fastest growing invertebrates on land or in the sea. It does not have a digestive tract (e.g. mouth, gut, or anus), and is completely dependent on its sulfur-oxidizing endosymbiont, the Gammaproteobacterium “Candidatus Endoriftia persephone” for its nutritional requirements. This association was the first and is the most well studied among chemolithoautotrophic symbioses. “Ca. E. persephone” is a chemolithoautotrophic bacterium that oxidizes sulfide as an electron donor for energy, reduces oxygen as a …

Can Florida's Springs Coast Provide A Potential Refuge For Calcifying Organisms? Evidence From Benthic Foraminifera, Kyle E. Amergian

USF Tampa Graduate Theses and Dissertations

Florida’s Springs Coast, located in the northeast Gulf of Mexico, includes an extensive system of salt marshes that discharge millions of liters of fresh water into coastal waters daily. The chemical properties of the spring waters include high alkalinity and high calcium concentrations due to the Paleogene limestone lithology of this region of Florida. Benthic foraminifers, which are recognized as ecologically important bioindicators, occur abundantly on the shallow shelf off the Springs Coast. Based on the prevalence of the benthic foraminifer Archaias angulatus in the seagrass beds along this shallow shelf, a previous study proposed that the Springs Coast provides …

Life History Through The Eyes Of A Hogfish: Evidence Of Trophic Growth And Differential Juvenile Habitat Use, Meaghan E. Faletti

USF Tampa Graduate Theses and Dissertations

Understanding ontogenetic linkages among fish habitats is critical for conservation of fish populations and the ecosystems on which they rely. Natural tags such as stable isotopes are an effective tool commonly used to investigate ecological questions regarding fish movement and habitat use. Here, I analyzed stable isotopes from the sequentially deposited laminae of Hogfish (Lachnolaimus maximus) eye lenses from the eastern Gulf of Mexico (eGOM) to investigate trophic and geographic changes across individual life histories. I documented evidence of entire-life scale trophic growth through increases in δ15N. I also observed depth separation at the juvenile stage, evidenced by variation in …

Population Demographics Of Golden Tilefish Lopholatilus Chamaeleonticeps In The Gulf Of Mexico, Greta J. Helmueller

USF Tampa Graduate Theses and Dissertations

The Deepwater Horizon (DWH) oil spill had catastrophic impacts on aquatic organisms in the Northern Gulf of Mexico (GoM). Longline gear was used to sample demersal fish species at 344 locations distributed throughout the GoM in the seven years following DWH. Sampling was accomplished deploying 450-500 baited hooks per station in depths ranging from 20-600 m. Using data from these surveys, I analyzed the length and age frequency, condition, growth, and mortality rates of Golden Tilefish (Lopholatilus chamaeleonticeps) throughout the GoM. Demersal habitat use and apparent high contaminant levels in Golden Tilefish makes them potentially vulnerable to oil spills such …

Variations Of Global Ocean Salinity From Multiple Gridded Argo Products, Chao Liu

USF Tampa Graduate Theses and Dissertations

Salinity is one of the fundamental ocean state variables. Variations of ocean salinity can be used to infer changes in the global water cycle and air-sea freshwater exchange. Many institutions have developed gridded Argo products of global coverage. However, the existing gridded salinity products have not yet been dedicatedly intercompare and assessed. In this study, the mean state, annual and interannual variabilities, and decadal changes of ocean salinity from five Argo-based gridded salinity products, available from UK Met Office, JAMSTEC, Scripps Institution of Oceanography, China Second Institute of Oceanography, and International Pacific Research Center, are examined and compared for their …

Iron-Virus Interactions: Development And Testing Of The Ferrojan Horse Hypothesis, Chelsea Bonnain

USF Tampa Graduate Theses and Dissertations

Iron is an essential micronutrient for phytoplankton metabolism that limits growth in many regions of the surface ocean. More than 99.9% of oceanic dissolved iron is organically complexed to an iron-binding ligand, many of which have yet to be characterized. This thesis puts forth the Ferrojan Horse Hypothesis, which predicts a role for marine phages in oceanic iron cycling. Based on evidence from non-marine model systems, the Ferrojan Horse Hypothesis suggests that some marine phages (short for bacteriophages, or viruses that infect bacteria) can use iron as a “Trojan Horse” to gain access to host siderophore-bound iron receptors for infection. …

Studies Of The Long-Term Change Of Global Mean And Regional Sea Surface Height, Yingli Zhu

USF Tampa Graduate Theses and Dissertations

Sea level change could have profound impacts on our society. We report here on three related sea level change problems. First, a variety of regression models have predicted different rates for global mean sea level rise over the past century. Some of these models are accelerating and others are not. We ask whether we can distinguish between these using a new nonparametric noise model that we have developed. Simulations show that we can, and further imply that GMSL is rising at an accelerating rate. Second, historical global mean sea level is reconstructed from tide gauges that are located along coastlines …

Past Hydroclimate And Vegetation Variation In Romania Inferred From Isotopic Geochemistry And Pollen Of Cave Bat Guano, Daniel Martin Cleary

USF Tampa Graduate Theses and Dissertations

While an abundance of paleo-records related to hydroclimate and vegetation exist in East-Central Europe, currently there is a scarcity of reconstructions that have the resolution to effectively capture the past 2000 years. A more complete understanding of this interval is important as it includes significant climatic events such as the Medieval Warm Period, Little Ice Age, and the post-industrial revolution human induced climate change. A solution to increasing our understanding of these events is the use of cave bat guano, a relatively underutilized source of climatic information.

Cave bat guano piles commonly have near annual deposition and in Europe can …

Estimating Coastal Water Turbidity Using Viirs Nighttime Measurement, Chih-Wei Huang

USF Tampa Graduate Theses and Dissertations

Coastal water turbidity is a key environmental factor that influences the relative clarity of the water, which therefore reduces sunlight penetration. The comprehensive spatial and temporal coverage of remote sensing allows mapping of water turbidity near the coast. Even in locations where time-consuming and expensive conventional turbidity monitoring programs exist, local technological limitations prevent complete coverage. Traditional optical satellite techniques using the visible band also have limitations in monitoring turbidity due to non-optimal observing conditions such as clouds, sun-glint, and thick aerosols. In this study, in order to complement the daytime satellite measurements, I used the data from Visible Infrared …

Species Abundance, Spatial And Vertical Distributionsof Large Heteropods (Pterotracheidae And Carinariidae)In The Northern Gulf Of Mexico, Kristine A. Clark

USF Tampa Graduate Theses and Dissertations

A description of species abundance, richness and distribution, and eye size of heteropod molluscs from the families Pterotracheidae and Carinariidae in the oligotrophic ecosystem of the northern Gulf of Mexico (GOM) is described based on discrete-depth sampling protocols. The collections were comprised from two midwater sampling programs conducted sequentially after the 2010 Deepwater Horizon oil spill (DWHOS): the Offshore Nekton Sampling and Analysis Program (ONSAP, 2011) and the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND, 2015-2018). Study materials from DEEPEND were collected during the initial five cruises of 2015-2017. These programs collected over 3,495 heteropods in two …

Zooplankton Community Structure In The Ne Gulf Of Mexico: Impacts Of Environmental Variability And The Deepwater Horizon Oil Spill, Kate M. Dubickas

USF Tampa Graduate Theses and Dissertations

In the northeastern Gulf of Mexico, relating changes in zooplankton communities to environmental factors is crucial to understanding the marine ecosystem and impacts of perturbations such as oil spills on marine ecosystems. Zooplankton samples were collected each year between 2005–2014 in spring and summer in the vicinity of the oil spill (Deepwater Horizon) that occurred in spring 2010. Zooplankton assemblages and environmental conditions significantly differed seasonally, driven by strong variations in zooplankton at continental shelf stations, and by environmental factors including Mississippi River discharge, wind direction, temperature, and chlorophyll concentrations. Total zooplankton abundances were greatest at shelf stations, intermediate at …

Fish Communities On Natural And Artificial Reefs In The Eastern Gulf Of Mexico, Elizabeth C. Viau

USF Tampa Graduate Theses and Dissertations

Artificial reefs have been deployed throughout the world’s oceans to act as habitat and fishing enhancement tools. To expand current research on the role of artificial reefs in the marine community, ordination and multivariate regression methods were used here to analyze survey data of natural and artificial reefs. The reefs, located in the Northern Gulf of Mexico (NGOM) and on the West Florida Shelf (WFS), had been previously surveyed from 2004 to 2015 using remote operated vehicle and stationary video techniques. This study tested the hypothesis that similar functional roles are accounted for at both natural and artificial reef sites …

Complex Tripartite Hydro Politics Of River Ganges, Muttaki Bin Kamal

USF Tampa Graduate Theses and Dissertations

This paper studies if the Flagship Namami Gange program of Cleaning the river Ganges in India aligns with the transcendental discourse on the river. Web contents as Facebook, YouTube and Twitter along with Indian English daily newspaper reports are used here as the source of data. The study shows that the program aligns with the transcendental discourse on river Ganges as the Mother Goddess and reaching out to her devotees.

Dna Barcoding Of Fish Eggs In The Gulf Of Mexico, Makenzie Burrows

USF Tampa Graduate Theses and Dissertations

DNA barcoding of fish eggs is a relatively new technique that enables more accurate identification of early life stages of ecologically and economically important fish species. Using DNA barcoding of individual planktonic percomorph eggs, this thesis determines putative spawning locations of neritic and oceanic fish species in the Gulf of Mexico (GoM). Surveys at 40 stations in the Gulf of Mexico showed a clear delineation of spawning sites, with neritic fish eggs generally found on continental shelves, and oceanic fish eggs found at the surface of deeper waters. However, samples collected between Florida and Cuba revealed exceptions to this trend …

Regeneration Of Trace Metals During Phytoplankton Decay: An Experimental Study, Adrienne P. Hollister

USF Tampa Graduate Theses and Dissertations

Trace metals act as important nutrients, and sometimes toxins, to phytoplankton and other marine microorganisms. When phytoplankton decay, the elements in their cells are released back into the water column through regeneration (also referred to as remineralization), one of the processes responsible for governing concentrations of dissolved trace metals and macronutrients in depth profiles. In order to experimentally study regeneration, controlled experimental incubations of mixed phytoplankton assemblages from the Gulf of Mexico (GoM) and monocultures of the diatom Pseudo-nitzschia dolorosa and the dinoflagellate Karenia brevis were placed in the dark and monitored as they decayed with naturally present bacteria. Over …

Cave Dripwater Isotopic Signals Related To The Altitudinal Gradient Of Mount-Lebanon: Implication For Speleothem Studies, Carole Nehme, Sophie Verheyden, Fadi H. Nader, Jocelyne Adjizian-Gerard, Dominique Genty, Kevin De Bont, Benedicte Minster, Ghada Salem, David Verstraten, Philippe Clayes

International Journal of Speleology

An important step in paleoclimate reconstructions based on vadose cave carbonate deposits or speleothems is to evaluate the sensitivity of the cave environment and speleothems to regional climate. Accordingly, we studied four caves, located at different altitudes along the western flank of Mount-Lebanon (Eastern Mediterranean). The objectives of this study are to identify the present-day variability in temperature, pCO₂, and water isotopic composition and to assess the possible influence of the altitudinal gradient on cave drip waters and cave streams. We present here an overview of the spatial variability of rainwater based on local and regional data, and …

Isolution 1.0: An Isotope Evolution Model Describing The Stable Oxygen (Δ18O) And Carbon (Δ13C) Isotope Values Of Speleothems, Michael Deininger, Denis Scholz

International Journal of Speleology

Stable oxygen and carbon isotope ratios (δ¹³C and δ¹⁸O) are the most applied climate and environmental proxies in speleothems allowing to infer past changes in cave drip water δ¹³C and δ¹⁸O related to climate and environmental variations from above the cave. However, disequilibrium isotope fractionation processes can modify δ¹³C and δ¹⁸O values in speleothems, which is in most cases difficult to estimate due to inter-dependencies on various cave specific parameter. To better understand the effect of these disequilibrium isotope fractionation processes proxy system models were developed in recent …

Climate Policy Implications Of Nonlinear Decline Of Arctic Land Permafrost And Other Cryosphere Elements, Dmitry Yumashev, Chris Hope, Kevin Schaefer, Kathrin Riemann-Campe, Fernando Iglesias-Suarez, Elchin Jafarov, Eleanor J. Burke, Paul J. Young, Yasin Elshorbany, Gail Whiteman

USF St. Petersburg campus Faculty Publications

Arctic feedbacks accelerate climate change through carbon releases from thawing permafrost and higher solar absorption from reductions in the surface albedo, following loss of sea ice and land snow. Here, we include dynamic emulators of complex physical models in the integrated assessment model PAGE-ICE to explore nonlinear transitions in the Arctic feedbacks and their subsequent impacts on the global climate and economy under the Paris Agreement scenarios. The permafrost feedback is increasingly positive in warmer climates, while the albedo feedback weakens as the ice and snow melt. Combined, these two factors lead to significant increases in the mean discounted economic …